KCC002993A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002993A_C01 KCC002993A_c01
ttggaCTCCCTAGCAGAGACTGAGAAAAATGTCCGCAGACTTTTACAGCAAGGAGAGCGA
CTATGGCTACATCCGCAAGGTCTCCGGACCTGTGGTGGTCGCCGACCACATGGCCGGTGC
TGCCATGTATGAGCTGGTTCGCGTGGGCACGGACAATCTGATTGGTGAAATCATTCGTCT
GGAGGGCGACAGCGCCACGATCCAGGTGTATGAGGAGACGGCTGGTCTCTGCGTGGGCGA
CGTGGTGGTGCGCACCAAGAAGCCCCTGTGCGTGGAGCTGGGCCCTGGTGTCCTGGGCAA
CATCTTCGATGGCATTCAGCGCCCGCTGAAGCAGATTGCCATTGACAGCGGCGACGTGTT
CATTCCTCGTGGTGTGGCCTGCCCGTCCCTGGACATTGTGAAGCAGTGGGAGTTCCAGCC
GAAGGGCTTCAAGGTCGGCGACCGCATCACCGGTGGTGACATTTACGGTATCGTGAATGA
GAACTCGCTCATTGAGCACCGCCTGATGCTGCCGCCCGGCGCTCGCGGTACTGTCACCTA
CATTGCCCCCACGGGCCACTACAACGTGGAGGAGGAGATCATCGAGGTGGACTTCCAGGG
CACCAAGAAGCGCTACTGCATGAAGCAGCTGTGGCCCGTGCGCATGCCGCGCCCGGTGGC
CCAGAAGCTGCTGGCCGACACGCCCCTGCTGACCGGCCAGCGCGTGCTGGACGCCCTGTT
CCCCTCGGTGCTGGGCGGCACCTGCGCCATTCCCGGCGCCTTCGGCTGCGGTAAGACCGT
CATTTCGCAGGCGCTGTCCAAGTACTCGAACTCGGACGGnatcatctacgtgggct


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002993A_C01 KCC002993A_c01
         (836 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q38677|VAA2_ACEAT Vacuolar ATP synthase catalytic subunit A i...   421  e-117
sp|Q38676|VAA1_ACEAT Vacuolar ATP synthase catalytic subunit A i...   416  e-115
emb|CAA71931.1| BV-70/5 [Beta vulgaris subsp. vulgaris]               405  e-112
sp|Q39291|VATA_BRANA Vacuolar ATP synthase catalytic subunit A (...   405  e-112
gb|AAO23981.1| vacuolar H+-ATPase A2 subunit isoform; V-ATPase A...   404  e-112

>sp|Q38677|VAA2_ACEAT Vacuolar ATP synthase catalytic subunit A isoform 2 (V-ATPase A
           subunit 2) (Vacuolar proton pump alpha subunit 2)
           (V-ATPase 69 kDa subunit 2) gi|1303679|dbj|BAA09098.1|
           adenosine triphosphatase A subunit [Acetabularia
           acetabulum]
          Length = 613

 Score =  421 bits (1082), Expect = e-117
 Identities = 204/263 (77%), Positives = 230/263 (86%)
 Frame = +2

Query: 47  SKESDYGYIRKVSGPVVVADHMAGAAMYELVRVGTDNLIGEIIRLEGDSATIQVYEETAG 226
           +KE DYG I+KVSGPVVVAD+M G+AMYELVRVGT  LIGEIIRLEGD+ATIQVYEET+G
Sbjct: 4   AKEGDYGSIKKVSGPVVVADNMGGSAMYELVRVGTGELIGEIIRLEGDTATIQVYEETSG 63

Query: 227 LCVGDVVVRTKKPLCVELGPGVLGNIFDGIQRPLKQIAIDSGDVFIPRGVACPSLDIVKQ 406
           L VGD V+RTK+PL V+LGPG+LGNIFDGIQRPLK IA  SGDVFIPRGV  PSLD  KQ
Sbjct: 64  LTVGDGVLRTKQPLSVDLGPGILGNIFDGIQRPLKAIADVSGDVFIPRGVNVPSLDQTKQ 123

Query: 407 WEFQPKGFKVGDRITGGDIYGIVNENSLIEHRLMLPPGARGTVTYIAPTGHYNVEEEIIE 586
           WEF P  ++VGDR+TGGDI G V EN+L++H++ML P A+GT+TYIAP G+YN+ E IIE
Sbjct: 124 WEFHPSSYRVGDRVTGGDIIGTVPENTLLDHKVMLIPQAKGTITYIAPAGNYNINERIIE 183

Query: 587 VDFQGTKKRYCMKQLWPVRMPRPVAQKLLADTPLLTGQRVLDALFPSVLGGTCAIPGAFG 766
           V+FQGTK  YCMKQ WPVR PRPV +KLLADTPLLTGQRVLD+LFP V GGTCAIPGAFG
Sbjct: 184 VEFQGTKYEYCMKQSWPVRSPRPVVEKLLADTPLLTGQRVLDSLFPGVRGGTCAIPGAFG 243

Query: 767 CGKTVISQALSKYSNSDGIIYVG 835
           CGKTVISQALSKYSNSDGI+YVG
Sbjct: 244 CGKTVISQALSKYSNSDGIVYVG 266

>sp|Q38676|VAA1_ACEAT Vacuolar ATP synthase catalytic subunit A isoform 1 (V-ATPase A
           subunit 1) (Vacuolar proton pump alpha subunit 1)
           (V-ATPase 69 kDa subunit 1) gi|1303673|dbj|BAA09097.1|
           adenosine triphosphatase A subunit [Acetabularia
           acetabulum]
          Length = 613

 Score =  416 bits (1069), Expect = e-115
 Identities = 205/263 (77%), Positives = 229/263 (86%)
 Frame = +2

Query: 47  SKESDYGYIRKVSGPVVVADHMAGAAMYELVRVGTDNLIGEIIRLEGDSATIQVYEETAG 226
           +KE DYG I+KVSGPVVVAD+M G+AMYELVRVGT  LIGEIIRLEGD+ATIQVYEET+G
Sbjct: 4   AKEGDYGSIKKVSGPVVVADNMGGSAMYELVRVGTGELIGEIIRLEGDTATIQVYEETSG 63

Query: 227 LCVGDVVVRTKKPLCVELGPGVLGNIFDGIQRPLKQIAIDSGDVFIPRGVACPSLDIVKQ 406
           L VGD V+RTK+PL V+LGPG+LGNIFDGIQRPLK IA  SGDVFIPRGV  PSLD  KQ
Sbjct: 64  LTVGDGVLRTKQPLSVDLGPGILGNIFDGIQRPLKAIADVSGDVFIPRGVNVPSLDQTKQ 123

Query: 407 WEFQPKGFKVGDRITGGDIYGIVNENSLIEHRLMLPPGARGTVTYIAPTGHYNVEEEIIE 586
           WEF+P  FKVGDR+TGGDI GIV ENSL++H++ML P A+GTVTYIA  G+Y + E+IIE
Sbjct: 124 WEFRPSAFKVGDRVTGGDIIGIVPENSLLDHKVMLLPQAKGTVTYIAAPGNYTINEKIIE 183

Query: 587 VDFQGTKKRYCMKQLWPVRMPRPVAQKLLADTPLLTGQRVLDALFPSVLGGTCAIPGAFG 766
           V+FQG K  Y MKQ WPVR PRPV +KLLADTPLLTGQRVLD+LFP V GGTCAIPGAFG
Sbjct: 184 VEFQGAKYEYSMKQSWPVRSPRPVVEKLLADTPLLTGQRVLDSLFPGVRGGTCAIPGAFG 243

Query: 767 CGKTVISQALSKYSNSDGIIYVG 835
           CGKTVISQALSKYSNSDGI+YVG
Sbjct: 244 CGKTVISQALSKYSNSDGIVYVG 266

>emb|CAA71931.1| BV-70/5 [Beta vulgaris subsp. vulgaris]
          Length = 332

 Score =  405 bits (1042), Expect = e-112
 Identities = 198/262 (75%), Positives = 223/262 (84%)
 Frame = +2

Query: 50  KESDYGYIRKVSGPVVVADHMAGAAMYELVRVGTDNLIGEIIRLEGDSATIQVYEETAGL 229
           KES+YGYIRKVSGPVVVAD M GAAMYELVRVG DNLIGEIIRLEGDSATIQVYEET GL
Sbjct: 17  KESEYGYIRKVSGPVVVADGMNGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETGGL 76

Query: 230 CVGDVVVRTKKPLCVELGPGVLGNIFDGIQRPLKQIAIDSGDVFIPRGVACPSLDIVKQW 409
            V D V+RT KPL VELGPG+LGNIFDGIQRPLK IA  SGDV+IPRGV+ P LD   QW
Sbjct: 77  TVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPPLDKDTQW 136

Query: 410 EFQPKGFKVGDRITGGDIYGIVNENSLIEHRLMLPPGARGTVTYIAPTGHYNVEEEIIEV 589
           +FQPK   VGD +TGGD+Y IV+ENSL++H + LPP A G +TYIAP G+Y +++ ++E+
Sbjct: 137 DFQPKKLGVGDLLTGGDLYAIVDENSLMQHHVALPPDAMGKITYIAPAGNYTIQDTVLEL 196

Query: 590 DFQGTKKRYCMKQLWPVRMPRPVAQKLLADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 769
           +FQG  K++ M Q WPVR PRPVA KL ADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC
Sbjct: 197 EFQGVVKKFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 256

Query: 770 GKTVISQALSKYSNSDGIIYVG 835
           GKTVISQALSKYSNSD ++YVG
Sbjct: 257 GKTVISQALSKYSNSDAVVYVG 278

>sp|Q39291|VATA_BRANA Vacuolar ATP synthase catalytic subunit A (V-ATPase A subunit)
           (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa
           subunit) (Tonoplast ATPase 70 kDa subunit) (BN59)
           gi|1362024|pir||S57790 H+-exporting ATPase (EC 3.6.3.6)
           70K chain, vacuolar (clone BN59) - rape
           gi|558479|gb|AAA82881.1| tonoplast ATPase 70 kDa subunit
          Length = 623

 Score =  405 bits (1041), Expect = e-112
 Identities = 199/262 (75%), Positives = 223/262 (84%)
 Frame = +2

Query: 50  KESDYGYIRKVSGPVVVADHMAGAAMYELVRVGTDNLIGEIIRLEGDSATIQVYEETAGL 229
           KES+YGY+RKVSGPVVVAD MAGAAMYELVRVG DNLIGEIIRLEGDSATIQVYEETAGL
Sbjct: 17  KESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGL 76

Query: 230 CVGDVVVRTKKPLCVELGPGVLGNIFDGIQRPLKQIAIDSGDVFIPRGVACPSLDIVKQW 409
            V D V+RT KPL VELGPG+LGNIFDGIQRPLK IA  SGDV+IPRGV+ P+LD    W
Sbjct: 77  TVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDCLW 136

Query: 410 EFQPKGFKVGDRITGGDIYGIVNENSLIEHRLMLPPGARGTVTYIAPTGHYNVEEEIIEV 589
           EFQPK F  GD ITGGD+Y  V ENSL++H + LPP A G +TY+AP G Y++++ ++E+
Sbjct: 137 EFQPKDFVEGDTITGGDLYATVFENSLMQHHVALPPDAMGKITYLAPAGQYSLKDTVLEL 196

Query: 590 DFQGTKKRYCMKQLWPVRMPRPVAQKLLADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 769
           +FQG KK + M Q WPVR PRPVA KL ADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC
Sbjct: 197 EFQGVKKSFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 256

Query: 770 GKTVISQALSKYSNSDGIIYVG 835
           GKTVISQALSKYSNSD ++YVG
Sbjct: 257 GKTVISQALSKYSNSDAVVYVG 278

>gb|AAO23981.1| vacuolar H+-ATPase A2 subunit isoform; V-ATPase A2 subunit isoform
           [Lycopersicon esculentum]
          Length = 623

 Score =  404 bits (1039), Expect = e-112
 Identities = 199/262 (75%), Positives = 225/262 (84%)
 Frame = +2

Query: 50  KESDYGYIRKVSGPVVVADHMAGAAMYELVRVGTDNLIGEIIRLEGDSATIQVYEETAGL 229
           KES+YGY+RKVSGPVVVAD MAGAAMYELVRVG DNLIGEIIRLEGDSATIQVYEETAGL
Sbjct: 17  KESEYGYVRKVSGPVVVADGMAGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGL 76

Query: 230 CVGDVVVRTKKPLCVELGPGVLGNIFDGIQRPLKQIAIDSGDVFIPRGVACPSLDIVKQW 409
            V D V+RT+KPL VELGPG+LGNIFDGIQRPLK IA  SGDV+IPRGV+ P+LD    W
Sbjct: 77  MVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDILW 136

Query: 410 EFQPKGFKVGDRITGGDIYGIVNENSLIEHRLMLPPGARGTVTYIAPTGHYNVEEEIIEV 589
           EF+PK    GD +TGGD+Y  V ENSL+EH + LPP A G +TYIAP GHY++++ ++E+
Sbjct: 137 EFEPKKIGEGDILTGGDLYANVFENSLMEHHVALPPDAMGKITYIAPAGHYSLKDTVLEL 196

Query: 590 DFQGTKKRYCMKQLWPVRMPRPVAQKLLADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 769
           +FQG KK++ M Q WPVR PRPVA KL ADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC
Sbjct: 197 EFQGVKKQFTMLQSWPVRTPRPVAAKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 256

Query: 770 GKTVISQALSKYSNSDGIIYVG 835
           GKTVISQALSKYSNSD ++YVG
Sbjct: 257 GKTVISQALSKYSNSDTVVYVG 278



EST assemble image


clone accession position
1 LC074c12_r AV624200 1 492
2 LCL023a06_r AV627227 6 467
3 MXL004b11_r BP093151 8 489
4 LCL004a09_r AV626194 14 353
5 MXL095b04_r BP098543 45 477
6 MX242a08_r BP091637 386 837
7 MXL098f10_r BP098762 443 803




Chlamydomonas reinhardtii
Kazusa DNA Research Institute