KCC002990A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002990A_C01 KCC002990A_c01
aggactggttggcaagcaagatccatatgcggttctaaaggtcggctcgcagcagttccg
caccaggaccgcagttgatgGCGGCAAGAACCCGGTGTGGAATGAGACTTTCCGCTTCAA
TGTCATCAACGAGAACGACGTTGAGTTAATTATCAAGGACAGCGATGTCAGCGCTGACGA
CATCATTGGAACTGCGCGCGTGTCACTGGCCAAGGTGCGTGAGCACGGCCGCGACACGCA
GCAGTGCGCGGTGCACAGCAAGTCGGGCAAGCAGCACGGCTTTGTGCAGGTGAACCTCAC
CTTCACTAGGAACAGCTCCCTGAAGGCCGGCGGCCATGGCGGCCAGCCCCAGCCGGGCGC
TTACCCGGGCTACCCGCAGCAGGCTTACGGCGCCTATGCGCAGCCCCAGGGCATTCCGGG
CTACGGCGTGCCATACGGTGCACCACCTCCCGGTGCCTACGGTGCGCCGCCGCCGGGCGC
CTACCCCGGCTACCCGCCGCAGCCCGGATATGGTGCGCCCGCACCTGGCTACCCGCCGCA
GCCGGGGTACCCCGCACCTGCCCCCGGCTACCCGCCGCAGCAGGGGTACCCCGGCGCGCC
GCCTCCTGGTCAGTACCCACCGACCGGTGCTCCCGGTGCCGCACCCCCGGCCTATGGCGC
GCCGTCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002990A_C01 KCC002990A_c01
         (667 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF13346.1|AF122022_1 unknown [Eufolliculina uhligi]               129  3e-29
gb|AAL79515.1| Igr2p [Tetrahymena thermophila]                        125  6e-28
ref|NP_567956.1| C2 domain-containing protein [Arabidopsis thali...   122  5e-27
pir||T05421 hypothetical protein F28A23.90 - Arabidopsis thalian...   108  9e-23
sp|P24639|ANX7_DICDI Annexin A7 (Annexin VII) (Synexin) gi|71775...    96  6e-19

>gb|AAF13346.1|AF122022_1 unknown [Eufolliculina uhligi]
          Length = 254

 Score =  129 bits (325), Expect = 3e-29
 Identities = 92/238 (38%), Positives = 119/238 (49%), Gaps = 32/238 (13%)
 Frame = +2

Query: 11  GKQDPYAVLKVGSQQFRTRTAVDGGKNPVWNETFRFNVINENDVELIIKDSD-VSADDII 187
           GK DPY V+ +G+++ ++R A   GK+P W +   F   N++ + + + D D  S+DDI+
Sbjct: 20  GKMDPYCVICLGAEKQQSRVADGAGKSPNWQDQLIFRRTNQDQIVIQVWDKDSASSDDIV 79

Query: 188 GTARVSLAKVREHGRDTQQCAVHSKSGKQHGFVQVNLTFT--------RNSSLKAGGH-- 337
           G A + L  +           +  K G+  G V++ +T+         +N + +  GH  
Sbjct: 80  GEASLPLHSILSSATWEDWVEIRHK-GRPAGQVRLGITWAPDGGHKPKQNPNAQHAGHPP 138

Query: 338 GGQPQPGAYP---GY-PQQAYGAYAQP-QGIPGYGVPYGA-PPPGAYGAPPPGAYP---- 487
            G P   AYP   GY PQQAY   A P QG P    P  A PP  AY  PP  AYP    
Sbjct: 139 QGYPPQQAYPPQQGYPPQQAYPPQAYPQQGYPPQAYPQQAYPPQQAY--PPQQAYPPQQG 196

Query: 488 ----GYPPQPGY----GAPAPGYPPQPGYPAPAPGYPPQQGYP---GAPPPGQYPPTG 628
               GYPP  GY    G P   YPPQ GYP P  GYPPQQGYP   G PP   YPP G
Sbjct: 197 YPPQGYPPPQGYPPQQGYPPQAYPPQQGYP-PQQGYPPQQGYPPQQGYPPQQGYPPYG 253

>gb|AAL79515.1| Igr2p [Tetrahymena thermophila]
          Length = 242

 Score =  125 bits (314), Expect = 6e-28
 Identities = 88/229 (38%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
 Frame = +2

Query: 5   LVGKQDPYAVLKVGSQQFRTRTAVDGGKNPVWNETFRFNVINENDVELIIKDSD-VSADD 181
           L GK DP+ ++ +GSQ+  +  A D GK P W + F F +++E+ +   I D D +S +D
Sbjct: 21  LFGKMDPFVIITIGSQKKTSAVAKDAGKTPAWCDQFNFQILSEDMMTFSIFDHDTMSKND 80

Query: 182 IIGTARVSLAKVREHGRDTQQCAVHSKSGKQHGFVQVNLTF---TRNSSLKAGGHGGQPQ 352
            I     +LA V + G+ T+      K GK  G +     F    +N +          Q
Sbjct: 81  FIAEGGFALANVLKGGKRTETINCMRK-GKPAGNLVCEFEFLPDQQNVAYVVQQPVAYGQ 139

Query: 353 PGAYPGYPQQAYGAYAQPQGIPG---YGVPYGAPPPGAYGAPPPGAYP-----GYPPQPG 508
           PG  P   QQ Y  Y   Q  PG   Y V    PP  AY  PP   YP     GYPPQ G
Sbjct: 140 PGFQP-VMQQGYPQYPAQQPYPGQQPYPVQQPYPPQQAY--PPQAGYPQYPAQGYPPQQG 196

Query: 509 YGAPAPGYPPQPGYPAPAPGYPPQQGYPGAPPPGQYPPTGAPGAAPPAY 655
           Y  P  GYPPQ GYP P  GYPPQQGYP  P  G  P  G P   P  Y
Sbjct: 197 Y-PPQQGYPPQQGYP-PQQGYPPQQGYP--PQQGYPPQQGYPQYPPNPY 241

>ref|NP_567956.1| C2 domain-containing protein [Arabidopsis thaliana]
           gi|15724316|gb|AAL06551.1|AF412098_1 AT4g34150/F28A23_90
           [Arabidopsis thaliana] gi|23397247|gb|AAN31905.1|
           unknown protein [Arabidopsis thaliana]
          Length = 247

 Score =  122 bits (306), Expect = 5e-27
 Identities = 86/223 (38%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
 Frame = +2

Query: 14  KQDPYAVLKVGSQQFRTRTAVDGGKNPVWNETFRFNVINE-NDVELIIKDSD-VSADDII 187
           +QDPY VL+ G +  RTRT  DGGKN V+ E F F +I    D+++ + +S+ +S DD I
Sbjct: 30  RQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTLIEGLRDLKVAVWNSNTLSTDDFI 89

Query: 188 GTARVSLAKVREHGRDTQQCAVHSKSGKQHGFVQVNLTFTRNSSLKAGGHGGQPQPGAYP 367
           G A + L KV     D     + SK+G+  G VQ+ L +   +  K   +G  P     P
Sbjct: 90  GNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLLHY---AGAKKHNYGSAPSAPYAP 146

Query: 368 GYPQQAYGAYAQPQGIPGYGV--PYGAPP--PGAYGAPPPGAYP---GYPPQPGYGAP-- 520
             PQ     Y+ P     Y    PY  P   P     P P  YP   GYPPQP    P  
Sbjct: 147 HVPQ-----YSAPPSASPYSTAPPYSGPSLYPQVQQYPQPSGYPPASGYPPQPSAYPPPS 201

Query: 521 APGYPPQP-GYPAPAPG-------YPPQQG-YPGAPPPGQYPP 622
             GYPP P  YP P P        YPPQ   YP  P PGQYPP
Sbjct: 202 TSGYPPIPSAYPPPPPSSAYPPQPYPPQPSYYPQGPYPGQYPP 244

>pir||T05421 hypothetical protein F28A23.90 - Arabidopsis thaliana
           gi|2911047|emb|CAA17557.1| putative protein [Arabidopsis
           thaliana] gi|7270364|emb|CAB80132.1| putative protein
           [Arabidopsis thaliana]
          Length = 279

 Score =  108 bits (269), Expect = 9e-23
 Identities = 78/219 (35%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
 Frame = +2

Query: 14  KQDPYAVLKVGSQQFRTRTAVDGGKNPVWNETFRFNVINE-NDVELIIKDSD-VSADDII 187
           +QDPY VL+ G +  RTRT  DGGKN V+ E F F +I    D+++ + +S+ +S DD I
Sbjct: 52  RQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTLIEGLRDLKVAVWNSNTLSTDDFI 111

Query: 188 GTARVSLAKVREHGRDTQQCAVHSKSGKQHGFVQVNLTFTRNSSLKAGGHGGQPQPGAYP 367
           G A + L KV     D     + SK+G        ++    + S     +G  P     P
Sbjct: 112 GNATIQLQKVLSQEYDDCTWTLQSKTGS------ADMVLLTDQSRYKHNYGSAPSAPYAP 165

Query: 368 GYPQQAYGAYAQPQGIPGYGVPYGAPPPGA-YGAPPPGAYPG-YP-----PQPGYGAPAP 526
             PQ                  Y APP  + Y   PP + P  YP     PQP    PA 
Sbjct: 166 HVPQ------------------YSAPPSASPYSTAPPYSGPSLYPQVQQYPQPSGYPPAS 207

Query: 527 GYPPQPG-YPAPAP-GYPP-QQGYPGAPPPGQYPPTGAP 634
           GYPPQP  YP P+  GYPP    YP  PP   YPP   P
Sbjct: 208 GYPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYP 246

>sp|P24639|ANX7_DICDI Annexin A7 (Annexin VII) (Synexin) gi|71775|pir||LUDO7 annexin VII
           - slime mold (Dictyostelium discoideum)
           gi|829171|emb|CAA42815.1| annexin 7 [Dictyostelium
           discoideum]
          Length = 462

 Score = 95.5 bits (236), Expect = 6e-19
 Identities = 64/139 (46%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
 Frame = +2

Query: 293 NLTFTRNSSLKAGGHGGQPQPGAYP--GYP-QQAYG---AYAQPQGIP---GYGVPYGAP 445
           N  +   S+    G  G PQ G  P  GYP QQ Y     Y   QG P   GY    G P
Sbjct: 6   NQGYPPQSNSPQPGQYGAPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYP 65

Query: 446 PPGAY----GAPPPGAYP---GYPPQPGYGAPAPGYPPQPGYPAPAPGYPPQQGYP--GA 598
           P   Y    G PP   YP   GYPPQ GY  P  GYPPQ GYP P  GYPPQQGYP  G 
Sbjct: 66  PQQGYPPQQGYPPQQGYPPQQGYPPQQGY-PPQQGYPPQQGYP-PQQGYPPQQGYPPQGY 123

Query: 599 PPPGQYPPTGAPGAAPPAY 655
           PP   YPP G P   P  +
Sbjct: 124 PPQQGYPPVGVPVGVPVGF 142

 Score = 82.8 bits (203), Expect = 4e-15
 Identities = 47/87 (54%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
 Frame = +2

Query: 419 GYGVPYGAPPPGAYGAPPPGAYP--GYPPQPGYGAPAPGYPPQPGYPAPAPGYPPQQGYP 592
           GY     +P PG YGAP  G  P  GYPPQ GY  P  GYPPQ GYP P  GYPPQQGYP
Sbjct: 8   GYPPQSNSPQPGQYGAPQQGYPPQQGYPPQQGY-PPQQGYPPQQGYP-PQQGYPPQQGYP 65

Query: 593 ---GAPPPGQYPPTGAPGAAPPAYGAP 664
              G PP   YPP       PP  G P
Sbjct: 66  PQQGYPPQQGYPP---QQGYPPQQGYP 89

 Score = 81.3 bits (199), Expect = 1e-14
 Identities = 56/112 (50%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
 Frame = +2

Query: 359 AYP---GYPQQAYGAYAQPQGIPG-YGVPYGAPPPGAYGAPPPGAYP---GYPPQPGYGA 517
           +YP   GYP Q+      PQ  PG YG P    PP   G PP   YP   GYPPQ GY  
Sbjct: 2   SYPPNQGYPPQSNS----PQ--PGQYGAPQQGYPP-QQGYPPQQGYPPQQGYPPQQGY-P 53

Query: 518 PAPGYPPQPGYPAPAPGYPPQQGYP---GAPPPGQYPPTGAPGAAPPAYGAP 664
           P  GYPPQ GYP P  GYPPQQGYP   G PP   YPP       PP  G P
Sbjct: 54  PQQGYPPQQGYP-PQQGYPPQQGYPPQQGYPPQQGYPP---QQGYPPQQGYP 101



EST assemble image


clone accession position
1 LC070h02_r AV623948 1 441
2 MXL040h12_r BP095383 290 667




Chlamydomonas reinhardtii
Kazusa DNA Research Institute