KCC002957A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002957A_C01 KCC002957A_c01
tCTAATCTCGCGAAAGGACTAACACAACTCACGCAAGACCGCGAACCAGGCTGCAAGGGG
CACGTTTAGGATGTTGCAACTCGCCGTTCGGCAAGCCCTAAAATCTAAAAACCGGGCCAC
GTCGGGCTTCAGGACAGCATGGAGCCTTACGGAAGCCCTGGGGCTAAGCAAGGGCAAGGA
GCCTGTCGACGTCTATGCCATAGACCCAAAGCTCGTGCTCAATCCTGAAAAGCTCAAGGC
TGCCGACCTGGACAAGGTGGCGGCGCGCTTCACGGTGTGTCGTGAGCTGCTGCCCAAGCT
GAGCAGGGGCGAGCCGGAGCTGGCGGAGATGGATGAGCCCGGCAACGCCTGGTACTTCGG
GGAGCGGGCCGAGATCTTTGACTACAAACTGGTGGGCGAGTTCTCCACCAAGTCAGGCTT
CGCAGCGCTGGTGCACGCGGACGTGGTGACGCGACTGCGCCAGCCCGACGCCGCCTCCCC
CGAGGCTGCGCGCCAGCCGCTGCTCTCCTGGCCCGAGTTCAAGGACCTCCTGAGTGACGC
CGTGGACTGGCCGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002957A_C01 KCC002957A_c01
         (555 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB85832.1| cell wall protein Awa1p [Saccharomyces cerevisiae]     45  5e-04
ref|XP_166549.2| KIAA1856 protein [Homo sapiens] gi|37538811|ref...    45  6e-04
emb|CAC17637.1| dJ1182A14.1 (similar to rat Espin) [Homo sapiens]      45  6e-04
dbj|BAB47485.1| KIAA1856 protein [Homo sapiens]                        45  6e-04
ref|NP_298556.1| 1,4-beta-cellobiosidase [Xylella fastidiosa 9a5...    45  8e-04

>dbj|BAB85832.1| cell wall protein Awa1p [Saccharomyces cerevisiae]
          Length = 1713

 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 42/134 (31%), Positives = 61/134 (45%)
 Frame = -1

Query: 552  GQSTASLRRSLNSGQESSGWRAASGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*SKI 373
            G S+A+   S +S   SSG    SG ++S   S +T S   S +       S T   S +
Sbjct: 835  GSSSATESGSASSVPSSSGSVTESGSSSSASESSITQSGTASGSSASSTSGSVTQSGSSV 894

Query: 372  SARSPKYQALPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFGSMA* 193
            S          GSS S++SGS   S  S S  +   A  +S S   S S  ST+ GS+  
Sbjct: 895  S----------GSSASSTSGSVTQSGSSVSGSSASSAPGISSSIPQSTSSASTASGSI-- 942

Query: 192  TSTGSLPLLSPRAS 151
             ++G+L  ++  AS
Sbjct: 943  -TSGTLTSITSSAS 955

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
 Frame = -1

Query: 552 GQSTASLRRSLNSGQESSGWRAA--SGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*S 379
           G S +    +  SG  +SG  +A  SG + SG  S   + +  S +       S T   S
Sbjct: 601 GSSVSGSTSATESGSSASGSSSATESGSSVSGSTSATESGSSVSGS------TSATESGS 654

Query: 378 KISARSPKYQALPGSSISASSGSPLLSLGSS--SRHTVKRAATLSRSAALSFSGLSTSFG 205
             S  S   ++   SS+ +SSGS   S  SS  S  ++ ++ T S S+A S SG  T  G
Sbjct: 655 SASGSSSATESGSASSVPSSSGSVTESGSSSSASESSITQSGTASGSSASSTSGSVTQSG 714

Query: 204 -SMA*TSTGSLPLLS 163
            S++ +S  S P +S
Sbjct: 715 SSVSGSSASSAPGIS 729

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
 Frame = -1

Query: 552  GQSTASLRRSLNSGQESSGWRAA--SGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*S 379
            G S +    +  SG   SG  +A  SG +ASG  S   + +  S +       S T   S
Sbjct: 778  GSSVSGSTSATESGSSVSGSTSATESGSSASGSSSATESGSSVSGS------TSATESGS 831

Query: 378  KISARSPKYQALPGSSISASSGSPLLSLGSS--SRHTVKRAATLSRSAALSFSGLSTSFG 205
              S  S   ++   SS+ +SSGS   S  SS  S  ++ ++ T S S+A S SG  T  G
Sbjct: 832  SASGSSSATESGSASSVPSSSGSVTESGSSSSASESSITQSGTASGSSASSTSGSVTQSG 891

Query: 204  SMA*TSTGS 178
            S    S+ S
Sbjct: 892  SSVSGSSAS 900

 Score = 38.5 bits (88), Expect = 0.061
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
 Frame = -1

Query: 552 GQSTASLRRSLN-SGQESSGWRAASGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*SK 376
           G S +S   S+  SG   SG  A+S    S    + T+SA T++    +   + TS+ S 
Sbjct: 510 GSSVSSTSGSVTQSGSSVSGSSASSAPGISSSIPQSTSSASTASGS--ITSGTLTSITSG 567

Query: 375 ISARSPKYQALPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFGSMA 196
            S+ +    ++ GSS +  SGS +    S S    +  +++S S + + SG S S GS +
Sbjct: 568 SSSATESGSSVSGSSSATESGSSV----SGSTSATESGSSVSGSTSATESGSSAS-GSSS 622

Query: 195 *TSTGS 178
            T +GS
Sbjct: 623 ATESGS 628

 Score = 38.1 bits (87), Expect = 0.079
 Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = -1

Query: 552 GQSTASLRRSLNSGQESSGWRAA--SGEAASGWRSRVTTSACTS--AAKPDLVENSPTSL 385
           G S +    +  SG  +SG  +A  SG + SG  S   + + +S  ++   + E+  +S 
Sbjct: 437 GSSVSGSTSATESGSSASGSSSATESGSSVSGSTSATESGSASSVPSSSGSVTESGSSSS 496

Query: 384 *SKISARSPKYQALPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFG 205
            S+ S       +  GSS+S++SGS   S  S S  +   A  +S S   S S  ST+ G
Sbjct: 497 ASESSITQSGTAS--GSSVSSTSGSVTQSGSSVSGSSASSAPGISSSIPQSTSSASTASG 554

Query: 204 SMA*TSTGSLPLLSPRAS 151
           S+   ++G+L  ++  +S
Sbjct: 555 SI---TSGTLTSITSGSS 569

 Score = 37.7 bits (86), Expect = 0.10
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
 Frame = -1

Query: 552  GQSTASLRRSLN-SGQESSGWRAASGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*SK 376
            G S +S   S+  SG   SG  A+S    S    + T+SA T++    +   + TS+ S 
Sbjct: 700  GSSASSTSGSVTQSGSSVSGSSASSAPGISSSIPQSTSSASTASGS--ITSGTLTSITSG 757

Query: 375  ISARSPKYQALPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFGSMA 196
             S+ +    +  GSS +  SGS +    S S    +  +++S S + + SG S S GS +
Sbjct: 758  SSSATESGSSASGSSSATESGSSV----SGSTSATESGSSVSGSTSATESGSSAS-GSSS 812

Query: 195  *TSTGS 178
             T +GS
Sbjct: 813  ATESGS 818

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 40/138 (28%), Positives = 66/138 (46%), Gaps = 4/138 (2%)
 Frame = -1

Query: 552  GQSTASLRRSLNSGQESSGWRAA--SGEAASGWRSRVTTSACTS--AAKPDLVENSPTSL 385
            G S +    +  SG   SG  +A  SG +ASG  S   + + +S  ++   + E+  +S 
Sbjct: 627  GSSVSGSTSATESGSSVSGSTSATESGSSASGSSSATESGSASSVPSSSGSVTESGSSSS 686

Query: 384  *SKISARSPKYQALPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFG 205
             S+ S       +  GSS S++SGS   S  S S  +   A  +S S   S S  ST+ G
Sbjct: 687  ASESSITQSGTAS--GSSASSTSGSVTQSGSSVSGSSASSAPGISSSIPQSTSSASTASG 744

Query: 204  SMA*TSTGSLPLLSPRAS 151
            S+   ++G+L  ++  +S
Sbjct: 745  SI---TSGTLTSITSGSS 759

 Score = 34.7 bits (78), Expect = 0.88
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
 Frame = -1

Query: 525 SLNSGQESSGWRAASGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*SKISARSPKYQA 346
           ++ SG  S+     SG + SG  S   + +  S +      +S T   S +S  +   ++
Sbjct: 425 AITSGSSSA---TESGSSVSGSTSATESGSSASGS------SSATESGSSVSGSTSATES 475

Query: 345 LPGSSISASSGSPLLSLGSS--SRHTVKRAATLSRSAALSFSGLSTSFG-SMA*TSTGSL 175
              SS+ +SSGS   S  SS  S  ++ ++ T S S+  S SG  T  G S++ +S  S 
Sbjct: 476 GSASSVPSSSGSVTESGSSSSASESSITQSGTASGSSVSSTSGSVTQSGSSVSGSSASSA 535

Query: 174 PLLS 163
           P +S
Sbjct: 536 PGIS 539

>ref|XP_166549.2| KIAA1856 protein [Homo sapiens] gi|37538811|ref|XP_353550.1| KIAA1856
            protein [Homo sapiens]
          Length = 2182

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 38/107 (35%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
 Frame = -2

Query: 551  ASPRRHSGGP*TRARRAAAGAQPRGRRRRAGAVASPRPRAPALRSLTWWRTRPPVCSQRS 372
            A PRR    P   +R A  G +P  + RR       RPR    R L   R+   +CS R 
Sbjct: 2075 ALPRRRRSPPRPPSRPARRGPRPTPQARR-------RPRPSPRRLL---RSPHSLCSPRL 2124

Query: 371  RPAPRS-TRRCRAHPSPPAPARP----CSAWAAAHDTP*SAPPPCPG 246
            RP PR+  RR RA  SPP  + P    C  W     +P S  P   G
Sbjct: 2125 RPGPRADPRRERASTSPPPRSWPSGSACRPWRTGPRSPPSCQPGSSG 2171

>emb|CAC17637.1| dJ1182A14.1 (similar to rat Espin) [Homo sapiens]
          Length = 1130

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 44/157 (28%), Positives = 57/157 (36%), Gaps = 16/157 (10%)
 Frame = +3

Query: 123  RASGQHGALRKPWG*ARARSLSTSMP*TQSSCSILKSSRLPTWTRWRRASRC----VVSC 290
            R S +H A+  P+G     +    +     +CS    +R   W R  R   C      + 
Sbjct: 662  RYSREHNAILWPFGELMTEADILRIEQQSRTCSCRPLTRASRWRRCLRRPDCRGRFAWAA 721

Query: 291  CPS*AGASRSWRRWMSPATPGTSGSGPRSLTTNWW-------ASSP-----PSQASQRWC 434
                 GA+R WR   S A    S + P +   +W        A+SP     P  AS    
Sbjct: 722  RTGSTGAARLWRARSSSAASPCSITAPPTSCAHWTRRPRAVRAASPRSPLAPRSASPSCR 781

Query: 435  TRTW*RDCASPTPPPPRLRASRCSPGPSSRTS*VTPW 545
              TW    ASP PPPP  R    SP         TPW
Sbjct: 782  RTTWRPALASPAPPPPTARWPTGSPW--------TPW 810

>dbj|BAB47485.1| KIAA1856 protein [Homo sapiens]
          Length = 1134

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 38/107 (35%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
 Frame = -2

Query: 551  ASPRRHSGGP*TRARRAAAGAQPRGRRRRAGAVASPRPRAPALRSLTWWRTRPPVCSQRS 372
            A PRR    P   +R A  G +P  + RR       RPR    R L   R+   +CS R 
Sbjct: 1027 ALPRRRRSPPRPPSRPARRGPRPTPQARR-------RPRPSPRRLL---RSPHSLCSPRL 1076

Query: 371  RPAPRS-TRRCRAHPSPPAPARP----CSAWAAAHDTP*SAPPPCPG 246
            RP PR+  RR RA  SPP  + P    C  W     +P S  P   G
Sbjct: 1077 RPGPRADPRRERASTSPPPRSWPSGSACRPWRTGPRSPPSCQPGSSG 1123

>ref|NP_298556.1| 1,4-beta-cellobiosidase [Xylella fastidiosa 9a5c]
           gi|11360411|pir||A82704 1,4-beta-cellobiosidase XF1267
           [imported] - Xylella fastidiosa (strain 9a5c)
           gi|9106252|gb|AAF84076.1|AE003960_10
           1,4-beta-cellobiosidase [Xylella fastidiosa 9a5c]
          Length = 683

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 40/125 (32%), Positives = 62/125 (49%)
 Frame = -1

Query: 552 GQSTASLRRSLNSGQESSGWRAASGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*SKI 373
           G S++S   S +    SSG  ++SG ++S   S  + S+ +S +       S +S  S  
Sbjct: 452 GSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGS-------SSSSGSSSS 504

Query: 372 SARSPKYQALPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFGSMA* 193
           S  S    +   S  S+SSGS   S  SSS  +   + + S S + S SG S+S GS + 
Sbjct: 505 SGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSG 564

Query: 192 TSTGS 178
           +S+GS
Sbjct: 565 SSSGS 569

 Score = 35.0 bits (79), Expect = 0.67
 Identities = 25/56 (44%), Positives = 33/56 (58%)
 Frame = -1

Query: 345 LPGSSISASSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFGSMA*TSTGS 178
           LPGS  S+SSGS   S  SSS  +   + + S S + S SG S+S GS   +S+GS
Sbjct: 448 LPGSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSS--SSSGS 501

 Score = 32.0 bits (71), Expect = 5.7
 Identities = 33/108 (30%), Positives = 50/108 (45%)
 Frame = -1

Query: 501 SGWRAASGEAASGWRSRVTTSACTSAAKPDLVENSPTSL*SKISARSPKYQALPGSSISA 322
           SG  ++SG ++S   S  + S+ +S +             S  S  S    +   S  S+
Sbjct: 451 SGSSSSSGSSSSSGSSSSSGSSSSSGS-------------SSSSGSSSSSGSSSSSGSSS 497

Query: 321 SSGSPLLSLGSSSRHTVKRAATLSRSAALSFSGLSTSFGSMA*TSTGS 178
           SSGS   S  SSS  +   + + S S + S SG S+S GS   +S+GS
Sbjct: 498 SSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSSSSSGSS--SSSGS 543



EST assemble image


clone accession position
1 LC060a03_r AV623176 1 538
2 LC062e05_r AV623352 2 515
3 LC077a08_r AV624384 23 555




Chlamydomonas reinhardtii
Kazusa DNA Research Institute