KCC002945A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002945A_C01 KCC002945A_c01
gagggtcatttaaggagtactttggcgagatgccgtggaccgccctgccctacggcaagc
gtgaggccaaagcacagctgTCTAAGCTATACAAGGTGCGCGGCATCCCTACCCTGGTCA
TCCTGGATGGCGAGACCGCCGGCGAGGTGATCATCACGAGCGGGCGAGACACCGTCAGCA
GCGACGAGAAGTGCGAGGGCTTCCCCCGGCCGCGCAAATGACGGCCGCGCACATTCGAGC
AGATCGTGGAGGGCGCGGTGCTGGTGGAGCCCAAGACAGGCGCTGAGGTGCCGGCGCTGG
AGCGGCTGCGCGGCAAGGTGTCACTGCTGTACTTTTCCGCGTCCTGGTGCCCGCCCTGCC
GCCGCTTTACGCCGCAGCTAGTGACGGCTATGGAGAAGCTATGCGCCGCGGGCAAGGCCG
TGGAGGCCGTGTTCGTGAGCGGCGACCGCGACGAGGCCTCGATGAACGAGTACCACAGCC
ACATGACGTGGCCGGCGCTGCCGTTCTCGGACAAGAAGCGCAACGACGAGCTCAACTCGC
GCTTCGAGGTGGAGGGCATCCCCACGCTGGTGGTGCTGGACGAGCAGTTCAACGTAATCA
CCACCGACGGCCGTGAGGCCGTGGCGTCCGACATCGAGTGCACACGCTTCCCCTGGCGCC
CCCAGCCTTTCGAGCAGCTGACCGGCAGCaccgcgaatcgtatcaacgatgggcccgtgc
tggtgctggtggtagatacggcggaccagaaggccgcggaggaggtggc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002945A_C01 KCC002945A_c01
         (769 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH04688.1| Nxn protein [Mus musculus]                             190  2e-47
ref|NP_032776.1| nucleoredoxin [Mus musculus] gi|1854550|emb|CAA...   190  2e-47
ref|XP_340858.1| similar to red-1 [Rattus norvegicus]                 190  2e-47
ref|NP_071908.2| nucleoredoxin; nucleoredoxin 1 [Homo sapiens]        189  5e-47
gb|AAH09327.2| NXN protein [Homo sapiens]                             169  4e-41

>gb|AAH04688.1| Nxn protein [Mus musculus]
          Length = 391

 Score =  190 bits (483), Expect = 2e-47
 Identities = 100/251 (39%), Positives = 146/251 (57%)
 Frame = +3

Query: 9   FKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSDE 188
           ++++  +MPW ALPY ++  K +L   Y+V  IP+L+ LD  T G+V+  +G   +  D 
Sbjct: 100 WQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDA-TTGKVVCRNGLLVIRDDP 158

Query: 189 KCEGFPRPRK*RPRTFEQIVEGAVLVEPKTGAEVPALERLRGKVSLLYFSASWCPPCRRF 368
           +   FP      P+ F +++ G +L       E  +LE   G    +YFSA WCPPCR  
Sbjct: 159 EGLEFPWG----PKPFREVIAGPLLRNNGQSLESSSLE---GSHVGVYFSAHWCPPCRSL 211

Query: 369 TPQLVTAMEKLCAAGKAVEAVFVSGDRDEASMNEYHSHMTWPALPFSDKKRNDELNSRFE 548
           T  LV +  K+  AG+  E +FVS DR E S  +Y S M W A+P++D+ R   LN  + 
Sbjct: 212 TRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYG 271

Query: 549 VEGIPTLVVLDEQFNVITTDGREAVASDIECTRFPWRPQPFEQLTGSTANRINDGPVLVL 728
           ++GIPTL+VLD Q  VIT  GR  V +D +C  FPW P+P  +L+ S A ++N+GP LVL
Sbjct: 272 IQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAVQLNEGPCLVL 331

Query: 729 VVDTADQKAAE 761
            VD+ D   +E
Sbjct: 332 FVDSEDDGESE 342

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 34/67 (50%), Positives = 47/67 (69%)
 Frame = +3

Query: 6   SFKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSD 185
           SFK+YF EMPW A+PY     +++L++LY ++GIPTL++LD +  GEVI   GR  V +D
Sbjct: 242 SFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQ--GEVITRQGRVEVLND 299

Query: 186 EKCEGFP 206
           E C  FP
Sbjct: 300 EDCREFP 306

 Score = 68.9 bits (167), Expect = 8e-11
 Identities = 44/147 (29%), Positives = 66/147 (43%), Gaps = 20/147 (13%)
 Frame = +3

Query: 327 LYFSASWCPPCRRFTPQLVTAMEKL-----------CAAGKA--------VEAVFVSGDR 449
           LYF  S   PC + +  L     +L             AG A        +E VFVS D+
Sbjct: 36  LYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQ 95

Query: 450 DEASMNEYHSHMTWPALPFSDKKRNDELNSRFEVEGIPTLVVLDEQF-NVITTDGREAVA 626
           D+    ++   M W ALP+ +K R  +L +++ V  IP+L+ LD     V+  +G   + 
Sbjct: 96  DQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIR 155

Query: 627 SDIECTRFPWRPQPFEQLTGSTANRIN 707
            D E   FPW P+PF ++      R N
Sbjct: 156 DDPEGLEFPWGPKPFREVIAGPLLRNN 182

>ref|NP_032776.1| nucleoredoxin [Mus musculus] gi|1854550|emb|CAA63408.1| red-1 [Mus
           musculus] gi|34849595|gb|AAH58244.1| Nucleoredoxin [Mus
           musculus]
          Length = 435

 Score =  190 bits (483), Expect = 2e-47
 Identities = 100/251 (39%), Positives = 146/251 (57%)
 Frame = +3

Query: 9   FKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSDE 188
           ++++  +MPW ALPY ++  K +L   Y+V  IP+L+ LD  T G+V+  +G   +  D 
Sbjct: 100 WQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDA-TTGKVVCRNGLLVIRDDP 158

Query: 189 KCEGFPRPRK*RPRTFEQIVEGAVLVEPKTGAEVPALERLRGKVSLLYFSASWCPPCRRF 368
           +   FP      P+ F +++ G +L       E  +LE   G    +YFSA WCPPCR  
Sbjct: 159 EGLEFPWG----PKPFREVIAGPLLRNNGQSLESSSLE---GSHVGVYFSAHWCPPCRSL 211

Query: 369 TPQLVTAMEKLCAAGKAVEAVFVSGDRDEASMNEYHSHMTWPALPFSDKKRNDELNSRFE 548
           T  LV +  K+  AG+  E +FVS DR E S  +Y S M W A+P++D+ R   LN  + 
Sbjct: 212 TRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYG 271

Query: 549 VEGIPTLVVLDEQFNVITTDGREAVASDIECTRFPWRPQPFEQLTGSTANRINDGPVLVL 728
           ++GIPTL+VLD Q  VIT  GR  V +D +C  FPW P+P  +L+ S A ++N+GP LVL
Sbjct: 272 IQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAVQLNEGPCLVL 331

Query: 729 VVDTADQKAAE 761
            VD+ D   +E
Sbjct: 332 FVDSEDDGESE 342

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 34/67 (50%), Positives = 47/67 (69%)
 Frame = +3

Query: 6   SFKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSD 185
           SFK+YF EMPW A+PY     +++L++LY ++GIPTL++LD +  GEVI   GR  V +D
Sbjct: 242 SFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQ--GEVITRQGRVEVLND 299

Query: 186 EKCEGFP 206
           E C  FP
Sbjct: 300 EDCREFP 306

 Score = 68.9 bits (167), Expect = 8e-11
 Identities = 44/147 (29%), Positives = 66/147 (43%), Gaps = 20/147 (13%)
 Frame = +3

Query: 327 LYFSASWCPPCRRFTPQLVTAMEKL-----------CAAGKA--------VEAVFVSGDR 449
           LYF  S   PC + +  L     +L             AG A        +E VFVS D+
Sbjct: 36  LYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQ 95

Query: 450 DEASMNEYHSHMTWPALPFSDKKRNDELNSRFEVEGIPTLVVLDEQF-NVITTDGREAVA 626
           D+    ++   M W ALP+ +K R  +L +++ V  IP+L+ LD     V+  +G   + 
Sbjct: 96  DQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIR 155

Query: 627 SDIECTRFPWRPQPFEQLTGSTANRIN 707
            D E   FPW P+PF ++      R N
Sbjct: 156 DDPEGLEFPWGPKPFREVIAGPLLRNN 182

>ref|XP_340858.1| similar to red-1 [Rattus norvegicus]
          Length = 435

 Score =  190 bits (483), Expect = 2e-47
 Identities = 100/251 (39%), Positives = 146/251 (57%)
 Frame = +3

Query: 9   FKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSDE 188
           ++++  +MPW ALPY ++  K +L   Y+V  IP+L+ LD  T G+V+  +G   +  D 
Sbjct: 100 WQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDA-TTGKVVCRNGLLVIRDDP 158

Query: 189 KCEGFPRPRK*RPRTFEQIVEGAVLVEPKTGAEVPALERLRGKVSLLYFSASWCPPCRRF 368
           +   FP      P+ F +++ G +L       E  +LE   G    +YFSA WCPPCR  
Sbjct: 159 EGLEFPWG----PKPFREVIAGPLLRNNGQSLESSSLE---GSHVGVYFSAHWCPPCRSL 211

Query: 369 TPQLVTAMEKLCAAGKAVEAVFVSGDRDEASMNEYHSHMTWPALPFSDKKRNDELNSRFE 548
           T  LV +  K+  AG+  E +FVS DR E S  +Y S M W A+P++D+ R   LN  + 
Sbjct: 212 TRVLVESYRKIKEAGQKFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYG 271

Query: 549 VEGIPTLVVLDEQFNVITTDGREAVASDIECTRFPWRPQPFEQLTGSTANRINDGPVLVL 728
           ++GIPTL+VLD Q  VIT  GR  V +D +C  FPW P+P  +L+ S A ++N+GP LVL
Sbjct: 272 IQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAVQLNEGPCLVL 331

Query: 729 VVDTADQKAAE 761
            VD+ D   +E
Sbjct: 332 FVDSEDDGESE 342

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 34/67 (50%), Positives = 47/67 (69%)
 Frame = +3

Query: 6   SFKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSD 185
           SFK+YF EMPW A+PY     +++L++LY ++GIPTL++LD +  GEVI   GR  V +D
Sbjct: 242 SFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQ--GEVITRQGRVEVLND 299

Query: 186 EKCEGFP 206
           E C  FP
Sbjct: 300 EDCREFP 306

 Score = 69.7 bits (169), Expect = 5e-11
 Identities = 44/147 (29%), Positives = 66/147 (43%), Gaps = 20/147 (13%)
 Frame = +3

Query: 327 LYFSASWCPPCRRFTPQLVTAMEKL-----------CAAGKA--------VEAVFVSGDR 449
           LYF  S   PC + +  L     +L             AG A        +E VFVS D+
Sbjct: 36  LYFGCSLSAPCAQLSASLAAFYSRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQ 95

Query: 450 DEASMNEYHSHMTWPALPFSDKKRNDELNSRFEVEGIPTLVVLDEQF-NVITTDGREAVA 626
           D+    ++   M W ALP+ +K R  +L +++ V  IP+L+ LD     V+  +G   + 
Sbjct: 96  DQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIR 155

Query: 627 SDIECTRFPWRPQPFEQLTGSTANRIN 707
            D E   FPW P+PF ++      R N
Sbjct: 156 DDPEGLEFPWGPKPFREVIAGPLLRNN 182

>ref|NP_071908.2| nucleoredoxin; nucleoredoxin 1 [Homo sapiens]
          Length = 435

 Score =  189 bits (479), Expect = 5e-47
 Identities = 98/251 (39%), Positives = 146/251 (58%)
 Frame = +3

Query: 9   FKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSDE 188
           ++++  +MPW ALPY ++  K +L   Y++  IP+L+ LD  T G+V+  +G   +  D 
Sbjct: 100 WQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDA-TTGKVVCRNGLLVIRDDP 158

Query: 189 KCEGFPRPRK*RPRTFEQIVEGAVLVEPKTGAEVPALERLRGKVSLLYFSASWCPPCRRF 368
           +   FP      P+ F +++ G +L       E  +LE   G    +YFSA WCPPCR  
Sbjct: 159 EGLEFPWG----PKPFREVIAGPLLRNNGQSLESSSLE---GSHVGVYFSAHWCPPCRSL 211

Query: 369 TPQLVTAMEKLCAAGKAVEAVFVSGDRDEASMNEYHSHMTWPALPFSDKKRNDELNSRFE 548
           T  LV +  K+  AG+  E +FVS DR E S  +Y S M W A+P++D+ R   LN  + 
Sbjct: 212 TRVLVESYRKIKEAGQNFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYG 271

Query: 549 VEGIPTLVVLDEQFNVITTDGREAVASDIECTRFPWRPQPFEQLTGSTANRINDGPVLVL 728
           ++GIPTL++LD Q  VIT  GR  V +D +C  FPW P+P  +L+ S A ++N+GP LVL
Sbjct: 272 IQGIPTLIMLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAAQLNEGPCLVL 331

Query: 729 VVDTADQKAAE 761
            VD+ D   +E
Sbjct: 332 FVDSEDDGESE 342

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 34/67 (50%), Positives = 47/67 (69%)
 Frame = +3

Query: 6   SFKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSD 185
           SFK+YF EMPW A+PY     +++L++LY ++GIPTL++LD +  GEVI   GR  V +D
Sbjct: 242 SFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQ--GEVITRQGRVEVLND 299

Query: 186 EKCEGFP 206
           E C  FP
Sbjct: 300 EDCREFP 306

 Score = 69.3 bits (168), Expect = 6e-11
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
 Frame = +3

Query: 327 LYFSASWCPPCRRFTPQLVTAMEKL---CAAG----------------KAVEAVFVSGDR 449
           LYF  S   PC + +  L     +L    AAG                + +E VFVS D+
Sbjct: 36  LYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGPGAGAGAAAEPEPRRRLEIVFVSSDQ 95

Query: 450 DEASMNEYHSHMTWPALPFSDKKRNDELNSRFEVEGIPTLVVLDEQF-NVITTDGREAVA 626
           D+    ++   M W ALP+ +K R  +L +++ +  IP+L+ LD     V+  +G   + 
Sbjct: 96  DQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRISNIPSLIFLDATTGKVVCRNGLLVIR 155

Query: 627 SDIECTRFPWRPQPFEQLTGSTANRIN 707
            D E   FPW P+PF ++      R N
Sbjct: 156 DDPEGLEFPWGPKPFREVIAGPLLRNN 182

>gb|AAH09327.2| NXN protein [Homo sapiens]
          Length = 326

 Score =  169 bits (428), Expect = 4e-41
 Identities = 91/235 (38%), Positives = 133/235 (55%)
 Frame = +3

Query: 57  KREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSDEKCEGFPRPRK*RPRTF 236
           +  A  +L   Y++  IP+L+ LD  T G+V+  +G   +  D +   FP      P+ F
Sbjct: 7   RNPATLKLWNKYRISNIPSLIFLDA-TTGKVVCRNGLLVIRDDPEGLEFPWG----PKPF 61

Query: 237 EQIVEGAVLVEPKTGAEVPALERLRGKVSLLYFSASWCPPCRRFTPQLVTAMEKLCAAGK 416
            +++ G +L       E  +LE   G    +YFSA WCPPCR  T  LV +  K+  AG+
Sbjct: 62  REVIAGPLLRNNGQSLESSSLE---GSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQ 118

Query: 417 AVEAVFVSGDRDEASMNEYHSHMTWPALPFSDKKRNDELNSRFEVEGIPTLVVLDEQFNV 596
             E +FVS DR E S  +Y S M W A+P++D+ R   LN  + ++GIPTL++LD Q  V
Sbjct: 119 NFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQGEV 178

Query: 597 ITTDGREAVASDIECTRFPWRPQPFEQLTGSTANRINDGPVLVLVVDTADQKAAE 761
           IT  GR  V +D +C  FPW P+P  +L+ S A ++N+GP LVL VD+ D   +E
Sbjct: 179 ITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAAQLNEGPCLVLFVDSEDDGESE 233

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 34/67 (50%), Positives = 47/67 (69%)
 Frame = +3

Query: 6   SFKEYFGEMPWTALPYGKREAKAQLSKLYKVRGIPTLVILDGETAGEVIITSGRDTVSSD 185
           SFK+YF EMPW A+PY     +++L++LY ++GIPTL++LD +  GEVI   GR  V +D
Sbjct: 133 SFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIMLDPQ--GEVITRQGRVEVLND 190

Query: 186 EKCEGFP 206
           E C  FP
Sbjct: 191 EDCREFP 197



EST assemble image


clone accession position
1 MX225e12_r BP090555 1 412
2 LC056f03_r AV622925 77 604
3 MXL084a03_r BP097948 314 769




Chlamydomonas reinhardtii
Kazusa DNA Research Institute