Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002935A_C01 KCC002935A_c01
(482 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_496624.1| mrna protein like (2M650) [Caenorhabditis elega... 33 1.8
emb|CAA21688.2| Hypothetical protein Y57A10B.1 [Caenorhabditis e... 33 1.8
ref|XP_220964.2| similar to keratin associated protein 4-12; ker... 32 3.0
gb|AAK49818.1| calcium channel subunit alpha 1A [Bos taurus] 32 4.0
ref|NP_114060.1| keratin associated protein 4-12; keratin associ... 32 4.0
>ref|NP_496624.1| mrna protein like (2M650) [Caenorhabditis elegans]
gi|7510253|pir||T27192 hypothetical protein Y57A10B.1 -
Caenorhabditis elegans
Length = 521
Score = 33.1 bits (74), Expect = 1.8
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 298 CNMSETGSSPCPGHSYELNTVSLTSIKSPSRSLHPTHAACRLCFACPRPLHHKLVPSKSR 477
C+ T CP EL + S +S+ S +RS CR+C C P + + S R
Sbjct: 155 CHHCSTTDLTCPKTQKELPSPSASSVYSLARSDMSNEPLCRICHCCWPPDSNDPLISPCR 214
Query: 478 C 480
C
Sbjct: 215 C 215
>emb|CAA21688.2| Hypothetical protein Y57A10B.1 [Caenorhabditis elegans]
Length = 470
Score = 33.1 bits (74), Expect = 1.8
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 298 CNMSETGSSPCPGHSYELNTVSLTSIKSPSRSLHPTHAACRLCFACPRPLHHKLVPSKSR 477
C+ T CP EL + S +S+ S +RS CR+C C P + + S R
Sbjct: 155 CHHCSTTDLTCPKTQKELPSPSASSVYSLARSDMSNEPLCRICHCCWPPDSNDPLISPCR 214
Query: 478 C 480
C
Sbjct: 215 C 215
>ref|XP_220964.2| similar to keratin associated protein 4-12; keratin associated
protein 4.12 [Rattus norvegicus]
Length = 440
Score = 32.3 bits (72), Expect = 3.0
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 ACAPPVRVVTCCNQDAKSMVN*LASIAKRQC*GHSC-PSHSVSSSCDPLCHNLGLC 226
+C P+ + + C +V S C C PS SVSS C P+C +C
Sbjct: 94 SCGGPICLPSSCRSQTWQLVTCEDSCGSSGCGSQCCQPSCSVSSCCQPVCCEATIC 149
>gb|AAK49818.1| calcium channel subunit alpha 1A [Bos taurus]
Length = 157
Score = 32.0 bits (71), Expect = 4.0
Identities = 23/83 (27%), Positives = 34/83 (40%)
Frame = +1
Query: 214 PRPVPCRSIGHTERTYLHLSTVTANARRCNMSETGSSPCPGHSYELNTVSLTSIKSPSRS 393
P P P + + + +S TAN N S G P +S + S T S +
Sbjct: 69 PTPAPTTTATNPQNA---VSRRTAN-NPGNPSNPGPPKTPENSLIVTNPSSTQANSAKTA 124
Query: 394 LHPTHAACRLCFACPRPLHHKLV 462
P H + ACP PL+H ++
Sbjct: 125 RKPDHTTVDIPPACPPPLNHTII 147
>ref|NP_114060.1| keratin associated protein 4-12; keratin associated protein 4.12
[Homo sapiens] gi|12655460|emb|CAC27582.1| keratin
associated protein 4.12 [Homo sapiens]
gi|13278825|gb|AAH04180.1|AAH04180 Similar to RIKEN cDNA
1110054P19 gene [Homo sapiens]
gi|13278909|gb|AAH04212.1|AAH04212 Similar to RIKEN cDNA
1110054P19 gene [Homo sapiens]
Length = 201
Score = 32.0 bits (71), Expect = 4.0
Identities = 29/107 (27%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Frame = +2
Query: 47 CTLLQACAPPVRVVTCCNQDAKSMVN*LASIAKRQC*GHSC-------PSHSVSSSCDPL 205
C C P TCC ++S + QC C PS +SSSC P
Sbjct: 95 CCQPTCCRPSCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSSCCPS 154
Query: 206 CHNLGLCHAGLLVILNEHTCTCLRSLLMHGDVTCQRRGPLPARVTRT 346
C C C CLR + G V+C P V T
Sbjct: 155 CCESSCC----------RPCCCLRPVC--GRVSCHTTCYRPTCVIST 189
