KCC002916A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002916A_C01 KCC002916A_c01
cacggcgagggtgtagtcagaatctttcctctacaacttgtcaatctgaagacggggtcg
cctgtgtcgtcgcaagcatgGCTCCCGCTTCTAGCAGTCCGCGCAGTCTTCTGGCTGGCC
AGGCTTCACAGCCTGCCAAAAAAGAACTAGAAGCTACCGGTGTTGTTTGTCAGAGGAGCT
GCCGAGGGCTCCTGCTTTACTTTCCCGTCAAGTCTGGCCTTAGTGAGGCCGAAGCAAAGC
GACAGAGCTCGCTGCGTGCAGTGGAACCTATCTGCATCGGCATCAGCAGCGTCTATAAGG
CTCCGGAAGCGCTGGACCTCAAAGCGGCCATGGACGCCCATGGGCTGCTGAATGTCAAGG
TGGACACGGCGTTCATTCTTGGGCACTCTGTTTACCAACCAAGCGACAAGACGCTCCCGC
CGGCCGTGAAGTCCGGCTTCGAGATTATGCGGGTGGCATCGTCGCCCTCCAGTGGCAGTG
ACGCCGCAGCAGCCAGCCCCGTGGCGGCTGAGGGGAGTAGCAGTGCAGCGCAAGGAAGCG
GGGACACGGCGAGCCCTCCGCCGTCCTCCTTCCGCTTCCTGACGTCCAGTGTCGACCTCA
ACAACCGTGTGAGCAAAATGCTCAACTCGATGATTCAGTTCGACATGGCGGCGTACAGCG
ACAAGTTCAAAAGCCAGGCGGTCAAGAACTGGTCATCAATGGACAAGTGGCTGCAGGACC
TCCGCAACGCAGTCTCCAATCCTAAGAATGGAGAGCAATCATAAGCGTGCGGCAACGGCC
CGCAGCAAGCAGAAGCCCATACAGGCGGCGGTGCCTTGCTGGGTGCACGCGGTGCATACA
TGACGCTAGGGCACATCAAGTGATTAACACGGCTCATGGCGGAAGTCTCCCGCAATTTGG
GGTATTCCGTTGCGCGTGAGCAAATCTCGTGATGCAGCAGATATGATGACGTGTACACTA
CATAGGACAGACGTGTTGCAAGCTATTGCCGCACCGGCAGGGGCTTCCTTCGCCACGTGA
TTGTTAGTAGGCACGCAGAAGTATGGGCACATTAAATGATGTGAACCTGTACGATGACTT
TAAGGATATGTGCGACGTTGTAGCAGTGCCTTCCATTTGCAATGGACCCCAGGTATATCT
TGGGGTTGGTCGTGTACATGAGCTCTCAGCTTTTTAGTTGGGCGCCTA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002916A_C01 KCC002916A_c01
         (1188 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_267008.1| hypothetical protein [Lactococcus lactis subsp....    46  0.001
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]                       44  0.004
emb|CAB46679.1| proteophosphoglycan [Leishmania major]                 41  0.047
gb|AAP82647.1| Hypothetical protein K06A9.1c [Caenorhabditis ele...    40  0.080
gb|AAM44371.1| hypothetical protein [Dictyostelium discoideum] g...    39  0.23

>ref|NP_267008.1| hypothetical protein [Lactococcus lactis subsp. lactis]
            gi|25401280|pir||D86731 hypothetical protein yihD
            [imported] - Lactococcus lactis subsp. lactis (strain
            IL1403) gi|12723779|gb|AAK04950.1|AE006319_4 UNKNOWN
            PROTEIN [Lactococcus lactis subsp. lactis]
          Length = 1063

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 62/270 (22%), Positives = 112/270 (40%), Gaps = 8/270 (2%)
 Frame = +3

Query: 21   NLSSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLY 200
            N SS+T  +    +    S A +S+S  S +A  +S  + +   A       S  G    
Sbjct: 647  NTSSSTSNASSSSSSSEGSSASSSNSSESSVASSSSVDSSQSSSAGVNSSSSSAEGSSAS 706

Query: 201  FPVKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLL--NVKVDTAF 374
                S  SE+     SS+ + +    G++    + E+    ++  + G +  +  VD++ 
Sbjct: 707  ---SSNSSESSVASSSSVDSSQSSSAGVNGSSSSSESSSASSSNSSEGSVASSSSVDSSQ 763

Query: 375  ILGHSVYQPSDKTL-PPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTA 551
                 V   S       A  S      +ASS S GS  ++++ V++  SSS+A+GS  ++
Sbjct: 764  SSSAGVNSSSSSAEGSSASSSNSSESSIASSSSVGSSQSSSTGVSS--SSSSAEGSSASS 821

Query: 552  SPPPSSFRFLTSSVDLNNRVSKMLNSMIQFD--MAAYSDKFKSQAVKNWSSMDKWLQDLR 725
            S    S    +SSVD +   S  +NS        +A S  F   ++ + SS+D       
Sbjct: 822  SNSSESSVASSSSVDSSQSSSAGVNSSSSSSEGSSASSSNFSESSIGSSSSVDSSQSSSS 881

Query: 726  ---NAVSNPKNGEQS*ACGNGPQQAEAHTG 806
               ++ S+  + E S     G   + ++TG
Sbjct: 882  TEGSSASSLSSSESSMTSSGGTSDSNSNTG 911

>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
          Length = 1325

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 44/181 (24%), Positives = 67/181 (36%)
 Frame = +3

Query: 27   SSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLYFP 206
            SS+   S        +S AP+SSS  +  A  +S P+     A                 
Sbjct: 872  SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPS--------------- 916

Query: 207  VKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGH 386
              +  S A +   SS  +        SS   AP A    A   +    +    +A     
Sbjct: 917  --ASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 974

Query: 387  SVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTASPPPS 566
            S    S  + P +  S       +S+PSS S A +AS  +A  SSS+A  +  +++P  S
Sbjct: 975  SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 1034

Query: 567  S 569
            S
Sbjct: 1035 S 1035

 Score = 41.2 bits (95), Expect = 0.036
 Identities = 45/185 (24%), Positives = 68/185 (36%)
 Frame = +3

Query: 15   SQNLSSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLL 194
            S + SS    S        +S AP+SSS  +  A  +S P+     A       +     
Sbjct: 884  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA----- 938

Query: 195  LYFPVKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAF 374
               P  S  S   A   S+           SS   AP A    A   +    +    +A 
Sbjct: 939  ---PSSSSSSAPSASSSSA----------PSSSSSAPSASSSSAPSSSSSAPSASSSSAP 985

Query: 375  ILGHSVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTAS 554
                S    +  +  P+  S       +S+PSS S A +AS  +A  SSS+A  +  +++
Sbjct: 986  SSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA 1045

Query: 555  PPPSS 569
            P  SS
Sbjct: 1046 PSSSS 1050

 Score = 39.3 bits (90), Expect = 0.14
 Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 14/206 (6%)
 Frame = +3

Query: 15   SQNLSSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLL 194
            S + SS    S        +S AP+SSS  +  A  +S P+     A       S     
Sbjct: 900  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSA---SSSSAPS 956

Query: 195  LYFPVKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAF 374
                  S  S +     SS  +        SS   AP A    A   +    +    +A 
Sbjct: 957  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAP 1016

Query: 375  ILGHSVYQPSDKTLP--------------PAVKSGFEIMRVASSPSSGSDAAAASPVAAE 512
                S    S  + P              P+  S       +S+PSS S +A ++  ++ 
Sbjct: 1017 SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSA 1076

Query: 513  GSSSAAQGSGDTASPPPSSFRFLTSS 590
             SSS++  S  ++S P SS  FL+ S
Sbjct: 1077 PSSSSSAPSASSSSAPSSSSSFLSGS 1102

 Score = 37.0 bits (84), Expect = 0.68
 Identities = 42/181 (23%), Positives = 68/181 (37%)
 Frame = +3

Query: 27   SSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLYFP 206
            SS++  S    A   +S +  SSS  +  A  +S P+     ++      S         
Sbjct: 689  SSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS----SSSAPSASSSSAPSSSSS 744

Query: 207  VKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGH 386
              S  S +     SS  +        SS   AP A    A   +    +    +A     
Sbjct: 745  APSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 804

Query: 387  SVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTASPPPS 566
            S    +  +  P+  S       +S+PSS S A +AS  +A  SSS+A  +  +++P  S
Sbjct: 805  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 864

Query: 567  S 569
            S
Sbjct: 865  S 865

 Score = 37.0 bits (84), Expect = 0.68
 Identities = 28/95 (29%), Positives = 41/95 (42%)
 Frame = +3

Query: 285  SSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGHSVYQPSDKTLPPAVKSGFEIMRVASS 464
            SS   AP A    A   +    +    +A     S    S  + P +  S       +S+
Sbjct: 725  SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSA 784

Query: 465  PSSGSDAAAASPVAAEGSSSAAQGSGDTASPPPSS 569
            PSS S A +AS  +A  SSS++  S  ++S P SS
Sbjct: 785  PSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 819

 Score = 36.6 bits (83), Expect = 0.89
 Identities = 44/182 (24%), Positives = 66/182 (36%), Gaps = 1/182 (0%)
 Frame = +3

Query: 27   SSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLYFP 206
            SS+   S        +S AP+SSS  +  A  +S P+      +                
Sbjct: 781  SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSA--------------- 825

Query: 207  VKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGH 386
                 S + A   SS           SS   AP A    A   +    +    +A     
Sbjct: 826  -----SSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 880

Query: 387  SVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAA-AASPVAAEGSSSAAQGSGDTASPPP 563
            S    S  + P +  S       +S+PSS S +A +AS  +A  SSS++  S  ++S P 
Sbjct: 881  SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 940

Query: 564  SS 569
            SS
Sbjct: 941  SS 942

 Score = 36.6 bits (83), Expect = 0.89
 Identities = 44/181 (24%), Positives = 68/181 (37%)
 Frame = +3

Query: 27   SSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLYFP 206
            SS+   S        +S AP+SSS  +  A  +S P+      +                
Sbjct: 750  SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSA--------------S 795

Query: 207  VKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGH 386
              S  S + +   S+  +  P     SS   AP A    A   +    +    +A     
Sbjct: 796  SSSAPSSSSSSAPSASSSSAP-----SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 850

Query: 387  SVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTASPPPS 566
            S    S  + P +  S       +S+PSS S A +AS  +A  SSS++  S  ++S P S
Sbjct: 851  SAPSASSSSAPSSSSSAPSASS-SSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSS 909

Query: 567  S 569
            S
Sbjct: 910  S 910

>emb|CAB46679.1| proteophosphoglycan [Leishmania major]
          Length = 873

 Score = 40.8 bits (94), Expect = 0.047
 Identities = 48/186 (25%), Positives = 71/186 (37%), Gaps = 1/186 (0%)
 Frame = +3

Query: 15   SQNLSSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLL 194
            S + SS    S        +S AP+SSS  +  A  +S P+      +      S     
Sbjct: 655  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSA--SSSSAPSSS 712

Query: 195  LYFPVKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAF 374
               P  S  S A +   SS  +        SS   AP A    A   +    +    +A 
Sbjct: 713  SSAPSASS-SSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAP 771

Query: 375  ILGHSVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAA-AASPVAAEGSSSAAQGSGDTA 551
                S    S  + P +  S       +S+PSS S +A +AS  +A  SSS++  S  ++
Sbjct: 772  SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSS 831

Query: 552  SPPPSS 569
            S P SS
Sbjct: 832  SAPSSS 837

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 43/181 (23%), Positives = 62/181 (33%)
 Frame = +3

Query: 27   SSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLYFP 206
            SS+   S        +S AP+SSS  +  A  +S P+     A                 
Sbjct: 643  SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSA-------------- 688

Query: 207  VKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGH 386
                 S + A   SS           SS   AP A    A   +                
Sbjct: 689  -----SSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS-------------- 729

Query: 387  SVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTASPPPS 566
            S    S  + P +  S       +S+PSS S A +AS  +A  SSS+A  +  +++P  S
Sbjct: 730  SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 789

Query: 567  S 569
            S
Sbjct: 790  S 790

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 42/181 (23%), Positives = 64/181 (35%)
 Frame = +3

Query: 27   SSTTCQSEDGVACVVASMAPASSSPRSLLAGQASQPAKKELEATGVVCQRSCRGLLLYFP 206
            SS+   S        +S AP+SSS  +  A  +S P+     A       S         
Sbjct: 705  SSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSA---SSSSAPSSSSS 761

Query: 207  VKSGLSEAEAKRQSSLRAVEPICIGISSVYKAPEALDLKAAMDAHGLLNVKVDTAFILGH 386
              S  S +     SS  +        SS   AP A    A   +                
Sbjct: 762  APSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS-------------- 807

Query: 387  SVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTASPPPS 566
            S    S  + P +  S       +S+PSS S +A ++  ++  SSS++  S  ++S P S
Sbjct: 808  SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSASSSSSSAPSASSSSAPSS 867

Query: 567  S 569
            S
Sbjct: 868  S 868

>gb|AAP82647.1| Hypothetical protein K06A9.1c [Caenorhabditis elegans]
          Length = 825

 Score = 40.0 bits (92), Expect = 0.080
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
 Frame = +3

Query: 204 PVKSGLSEAEAKRQSSLRAVEPICIGISSVYK----APEALDLKAAMDAHGLLNVKVDTA 371
           P  +G+S + A    S     P  +G SS       +  AL + ++  +         T 
Sbjct: 5   PTTAGISSSPAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTP 64

Query: 372 FILGHSVYQPSDKTLPPAVKSGFEIMRVASSPSS-GSDAAAASPVAAEGSSSAAQGSGDT 548
            +L  S  Q S  T P +V         ASSPS+ GS + AAS  +    S+ A  +G T
Sbjct: 65  VVLSSSTIQSSSGTFPSSV---------ASSPSTVGSTSGAASSSSYATVSTIAGSTGST 115

Query: 549 ASPPPSSFRFLTSS 590
            +P P S   + SS
Sbjct: 116 ITPVPGSSSTIGSS 129

>gb|AAM44371.1| hypothetical protein [Dictyostelium discoideum]
           gi|28828379|gb|AAM09347.2| hypothetical protein
           [Dictyostelium discoideum]
          Length = 545

 Score = 38.5 bits (88), Expect = 0.23
 Identities = 33/119 (27%), Positives = 55/119 (45%), Gaps = 2/119 (1%)
 Frame = +3

Query: 384 HSVYQPSDKTLPPAVKSGFEIMRVASSPSSGSDAAAASPVAAEGSSSAAQGSGDTASPPP 563
           H +++  +K  P +  S        SS SS S ++++S  ++  SSS++  S  ++SPP 
Sbjct: 99  HLIFEKVEKPTPSSSSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPPL 150

Query: 564 SSFRFLTSSVDLNNRVSKMLNSMIQFDMAAY--SDKFKSQAVKNWSSMDKWLQDLRNAV 734
           S+F          N V    NS    D++ Y  +D  KS   KN S     +Q  +N +
Sbjct: 151 STF---------PNLVESTTNSYGSLDISRYLLNDNLKSNE-KNRSIEPDQIQISKNTI 199



EST assemble image


clone accession position
1 LCL077f07_r AV630348 1 491
2 LC046b03_r AV622172 209 746
3 LCL050b08_r AV629000 306 796
4 LC073c10_r AV624127 614 1116
5 LC078a06_r AV624457 710 1188




Chlamydomonas reinhardtii
Kazusa DNA Research Institute