Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002912A_C01 KCC002912A_c01
(519 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC08339.1| katanin p80 subunit-like protein [Arabidopsis th... 46 3e-04
ref|NP_568194.1| katanin p80 subunit - like protein [Arabidopsis... 46 3e-04
pir||D96764 unknown protein F25P22.14 [imported] - Arabidopsis t... 45 4e-04
gb|AAM92815.1| putative microtubule-severing protein subunit [Or... 45 4e-04
ref|NP_177513.2| transducin / WD-40 repeat protein family [Arabi... 45 4e-04
>emb|CAC08339.1| katanin p80 subunit-like protein [Arabidopsis thaliana]
Length = 823
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/57 (38%), Positives = 36/57 (62%)
Frame = +1
Query: 124 DGNYIYAAGANAQLCVFHLGSGRLVHTARPHKINVRDVDYDPRRNLLATCSFDKTVK 294
DG +I + G + + V+ L +G+L+H + H+ ++ +D+ P LLAT S DKTVK
Sbjct: 247 DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 303
>ref|NP_568194.1| katanin p80 subunit - like protein [Arabidopsis thaliana]
Length = 871
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/57 (38%), Positives = 36/57 (62%)
Frame = +1
Query: 124 DGNYIYAAGANAQLCVFHLGSGRLVHTARPHKINVRDVDYDPRRNLLATCSFDKTVK 294
DG +I + G + + V+ L +G+L+H + H+ ++ +D+ P LLAT S DKTVK
Sbjct: 247 DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 303
>pir||D96764 unknown protein F25P22.14 [imported] - Arabidopsis thaliana
gi|12324198|gb|AAG52064.1|AC012679_2 unknown protein;
53481-57666 [Arabidopsis thaliana]
Length = 522
Score = 45.4 bits (106), Expect = 4e-04
Identities = 26/64 (40%), Positives = 36/64 (55%)
Frame = +1
Query: 106 AAAWHRDGNYIYAAGANAQLCVFHLGSGRLVHTARPHKINVRDVDYDPRRNLLATCSFDK 285
AA G++IY G + +L F+ SG L H H+ +V + + P RNLLAT S D
Sbjct: 456 AACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDC 515
Query: 286 TVKL 297
T+KL
Sbjct: 516 TMKL 519
>gb|AAM92815.1| putative microtubule-severing protein subunit [Oryza sativa
(japonica cultivar-group)] gi|31432834|gb|AAP54421.1|
putative microtubule-severing protein subunit [Oryza
sativa (japonica cultivar-group)]
Length = 866
Score = 45.4 bits (106), Expect = 4e-04
Identities = 22/57 (38%), Positives = 36/57 (62%)
Frame = +1
Query: 124 DGNYIYAAGANAQLCVFHLGSGRLVHTARPHKINVRDVDYDPRRNLLATCSFDKTVK 294
DG +I + G++ + ++ L +G+L+H R H+ + +D+ P LLAT S DKTVK
Sbjct: 159 DGRWIVSGGSDNSVKIWDLTAGKLLHDFRNHEGPINCLDFHPHEFLLATGSADKTVK 215
>ref|NP_177513.2| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
gi|18087515|gb|AAL58892.1|AF462796_1 At1g73720/F25P22_14
[Arabidopsis thaliana] gi|20857033|gb|AAM26696.1|
At1g73720/F25P22_14 [Arabidopsis thaliana]
Length = 511
Score = 45.4 bits (106), Expect = 4e-04
Identities = 26/64 (40%), Positives = 36/64 (55%)
Frame = +1
Query: 106 AAAWHRDGNYIYAAGANAQLCVFHLGSGRLVHTARPHKINVRDVDYDPRRNLLATCSFDK 285
AA G++IY G + +L F+ SG L H H+ +V + + P RNLLAT S D
Sbjct: 445 AACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDC 504
Query: 286 TVKL 297
T+KL
Sbjct: 505 TMKL 508
