Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002905A_C01 KCC002905A_c01
(491 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T19808 hypothetical protein C37A5.10 - Caenorhabditis elegans 38 0.077
gb|AAA61019.1| T-cell receptor beta-chain (V12-D-J-C) precursor 32 4.2
emb|CAC20094.1| Nahoda protein [Drosophila melanogaster] 32 5.5
gb|AAK71307.1| TCR beta chain Vbeta13S3/S2A1T-WAGPRQPQHF-Jbeta1.... 32 5.5
emb|CAD41797.1| OSJNBa0008M17.13 [Oryza sativa (japonica cultiva... 31 7.2
>pir||T19808 hypothetical protein C37A5.10 - Caenorhabditis elegans
Length = 136
Score = 37.7 bits (86), Expect = 0.077
Identities = 22/63 (34%), Positives = 30/63 (46%), Gaps = 7/63 (11%)
Frame = +3
Query: 303 PIARGKSSWRPL------GHRSYQGTIYM*RLSCGTCSNQSHH-QRLRWNRHTQAPRASA 461
PI+ G+ +WRP R G + RLS TCS+QS H RW + + P +
Sbjct: 43 PISVGREAWRPFYPIDRHSTRFRNGLLSTPRLSTSTCSSQSEHTNEWRWRENRRNPNFPS 102
Query: 462 QMT 470
Q T
Sbjct: 103 QYT 105
>gb|AAA61019.1| T-cell receptor beta-chain (V12-D-J-C) precursor
Length = 103
Score = 32.0 bits (71), Expect = 4.2
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 462 GLKLVGPVYGGSTSASGD-DFGWSRSRSSGVTYILCLDTNDGREASMSFCRERWAETPRQ 286
GL+L+ YG + G+ G+S SRS ++L L++ E S+ FC R P Q
Sbjct: 27 GLRLIHYSYGVKDTDKGEVSDGYSVSRSKTEDFLLTLESLPAPETSVYFCATR----PGQ 82
Query: 285 VVNDLHSGLGTAIL 244
+ G GT +L
Sbjct: 83 GPETQYFGPGTRLL 96
>emb|CAC20094.1| Nahoda protein [Drosophila melanogaster]
Length = 1335
Score = 31.6 bits (70), Expect = 5.5
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2
Query: 263 PECKSFTTWRGVSAHRSRQKLMEASRPSFVSRHNIYVTPELRDLLQPKSSPEAEVEP 433
PECK+F R + +EAS P S PE + +PKS PE + EP
Sbjct: 299 PECKNFPLIRDIG---DLTTTLEASAPEPKSEPEPKSEPEPKSEPEPKSEPEPKSEP 352
>gb|AAK71307.1| TCR beta chain Vbeta13S3/S2A1T-WAGPRQPQHF-Jbeta1.5 [Homo sapiens]
Length = 119
Score = 31.6 bits (70), Expect = 5.5
Identities = 20/60 (33%), Positives = 33/60 (54%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 GLKLVGPVYGGSTSASGD-DFGWSRSRSSGVTYILCLDTNDGREASMSFCRERWAETPRQ 286
GL+L+ G T+A G+ G++ SR + ++L L++ + S+ FC WA PRQ
Sbjct: 54 GLRLIHYSVGEGTTAKGEVPDGYNVSRLRKLNFLLGLESAAPSQTSVYFCTSSWA-GPRQ 112
>emb|CAD41797.1| OSJNBa0008M17.13 [Oryza sativa (japonica cultivar-group)]
Length = 1109
Score = 31.2 bits (69), Expect = 7.2
Identities = 22/79 (27%), Positives = 29/79 (35%)
Frame = +3
Query: 255 CPIRSVNRLRLGGASPPIARGKSSWRPLGHRSYQGTIYM*RLSCGTCSNQSHHQRLRWNR 434
C + L +GG + R WRP HR S HHQR R +
Sbjct: 101 CHVNDFPELGIGGTPVLVRR----WRPRDHRDQHD-----HQSQRHHHRHHHHQRQRHHH 151
Query: 435 HTQAPRASAQMTWGPRLRQ 491
H Q + T PR+R+
Sbjct: 152 HHQRQQRRGSRTRDPRVRR 170
