Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002894A_C01 KCC002894A_c01
(713 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA66373.1| EBNA1 [Herpesvirus papio] 52 7e-06
gb|AAN60302.1| unknown [Arabidopsis thaliana] 49 8e-05
ref|NP_565124.1| expressed protein [Arabidopsis thaliana] gi|157... 47 2e-04
pir||F96788 protein T4O12.22 [imported] - Arabidopsis thaliana g... 47 2e-04
ref|NP_696768.1| translation initiation factor If-2 [Bifidobacte... 47 3e-04
>gb|AAA66373.1| EBNA1 [Herpesvirus papio]
Length = 476
Score = 52.4 bits (124), Expect = 7e-06
Identities = 29/71 (40%), Positives = 37/71 (51%), Gaps = 3/71 (4%)
Frame = +3
Query: 246 STGRGRGRG---RGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDGTGQQDTQTQPMDV 416
S GRGRGRG RGRG+ ++ GRGRGRGRGGGR+G G+ +
Sbjct: 149 SRGRGRGRGTGSRGRGRGRGGGSGSSRGRGKHRGRGRGRGRGGGREGEGEHGKKRPRSPS 208
Query: 417 DGPGDALMAAT 449
G + A+T
Sbjct: 209 GGSSSSSSAST 219
Score = 35.0 bits (79), Expect = 1.2
Identities = 20/43 (46%), Positives = 22/43 (50%)
Frame = +3
Query: 240 ARSTGRGRGRGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGG 368
A +G RGRGRGRG + RGRGRGRGGG
Sbjct: 143 AGGSGGSRGRGRGRGTGS---------------RGRGRGRGGG 170
Score = 35.0 bits (79), Expect = 1.2
Identities = 21/44 (47%), Positives = 22/44 (49%)
Frame = +3
Query: 252 GRGRGRGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDGTG 383
GRG G GRGRG+ GRGRGRG GG R G G
Sbjct: 25 GRG-GHGRGRGR----------------GRGRGRGHGGSRGGLG 51
Score = 34.3 bits (77), Expect = 2.0
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = +3
Query: 240 ARSTGRGRGRGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDGTGQ 386
A + G G G G G G A A A S GRGRGRG G G G+
Sbjct: 120 AGAGGSGAGAG-GSGAGAGGSGAGAGGSGGSRGRGRGRGTGSRGRGRGR 167
Score = 33.1 bits (74), Expect = 4.4
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 236 GGKKHRPRQGQGQGPGTARFQQGRGGT-GTSGQRGPRAGPWTGRGPGWNGPTGHANPAHG 412
GG +G+G+G G+ +GRGG G+S RG G GRG G G G HG
Sbjct: 144 GGSGGSRGRGRGRGTGSRGRGRGRGGGSGSSRGRGKHRGRGRGRGRG-GGREGEGE--HG 200
Query: 413 C*RTWRRAHGGNAGAGARAAAHAT 484
R R+ G + + + A+ A+
Sbjct: 201 KKRP--RSPSGGSSSSSSASTRAS 222
>gb|AAN60302.1| unknown [Arabidopsis thaliana]
Length = 272
Score = 48.9 bits (115), Expect = 8e-05
Identities = 27/58 (46%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Frame = +3
Query: 252 GRGRG-RGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDGTGQQDTQTQPMDVDG 422
GRGRG RG G G + + S GRGRGRGRGGGR G G+ P+ DG
Sbjct: 201 GRGRGGRGSGYGNVNNEYNDGGMEQDRSYGRGRGRGRGGGRGGRGRGGYNGPPLQQDG 258
Score = 32.0 bits (71), Expect = 9.8
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = +3
Query: 255 RGRGRGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDG 377
RGRG RGRG GRGRGRGRGG +G
Sbjct: 149 RGRGGRRGRG-----------------GRGRGRGRGGRGNG 172
>ref|NP_565124.1| expressed protein [Arabidopsis thaliana]
gi|15724324|gb|AAL06555.1|AF412102_1 At1g76010/T4O12_22
[Arabidopsis thaliana] gi|15809882|gb|AAL06869.1|
At1g76010/T4O12_22 [Arabidopsis thaliana]
gi|16226599|gb|AAL16210.1|AF428441_1 At1g76010/T4O12_22
[Arabidopsis thaliana] gi|21700865|gb|AAM70556.1|
At1g76010/T4O12_22 [Arabidopsis thaliana]
Length = 350
Score = 47.4 bits (111), Expect = 2e-04
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 243 RSTGRGRGRGRGRGQPASNK-------DAAAPAPAASVGRGRGRGRGGGRDGTGQQDTQT 401
R GRGRGRGRGRG+ + S GRGRGRGRG G G+
Sbjct: 151 RGRGRGRGRGRGRGRGGRGNAYVNVEHEDGGWEREQSYGRGRGRGRGRSSRGRGRGGYNG 210
Query: 402 QPMDVDGPGD 431
P + D P D
Sbjct: 211 PPNEYDAPQD 220
Score = 37.4 bits (85), Expect = 0.23
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +3
Query: 252 GRGRGRGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDGTGQQDTQTQPMDVDGP 425
GRGRGRGRGRG GRGRGGGR G G + ++ DGP
Sbjct: 313 GRGRGRGRGRG---------------------GRGRGGGRGGDGGFNNRS-----DGP 344
Score = 32.0 bits (71), Expect = 9.8
Identities = 18/53 (33%), Positives = 25/53 (46%)
Frame = +2
Query: 236 GGKKHRPRQGQGQGPGTARFQQGRGGTGTSGQRGPRAGPWTGRGPGWNGPTGH 394
GG + G+G+G G R +GRG G +G P G G G++ P H
Sbjct: 180 GGWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDG-GYGYDAPHEH 231
>pir||F96788 protein T4O12.22 [imported] - Arabidopsis thaliana
gi|8778814|gb|AAF79819.1|AC007396_20 T4O12.22
[Arabidopsis thaliana]
Length = 369
Score = 47.4 bits (111), Expect = 2e-04
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +3
Query: 243 RSTGRGRGRGRGRGQPASNK-------DAAAPAPAASVGRGRGRGRGGGRDGTGQQDTQT 401
R GRGRGRGRGRG+ + S GRGRGRGRG G G+
Sbjct: 170 RGRGRGRGRGRGRGRGGRGNAYVNVEHEDGGWEREQSYGRGRGRGRGRSSRGRGRGGYNG 229
Query: 402 QPMDVDGPGD 431
P + D P D
Sbjct: 230 PPNEYDAPQD 239
Score = 37.4 bits (85), Expect = 0.23
Identities = 24/58 (41%), Positives = 27/58 (46%)
Frame = +3
Query: 252 GRGRGRGRGRGQPASNKDAAAPAPAASVGRGRGRGRGGGRDGTGQQDTQTQPMDVDGP 425
GRGRGRGRGRG GRGRGGGR G G + ++ DGP
Sbjct: 332 GRGRGRGRGRG---------------------GRGRGGGRGGDGGFNNRS-----DGP 363
Score = 32.0 bits (71), Expect = 9.8
Identities = 18/53 (33%), Positives = 25/53 (46%)
Frame = +2
Query: 236 GGKKHRPRQGQGQGPGTARFQQGRGGTGTSGQRGPRAGPWTGRGPGWNGPTGH 394
GG + G+G+G G R +GRG G +G P G G G++ P H
Sbjct: 199 GGWEREQSYGRGRGRGRGRSSRGRGRGGYNGPPNEYDAPQDG-GYGYDAPHEH 250
>ref|NP_696768.1| translation initiation factor If-2 [Bifidobacterium longum NCC2705]
gi|23326903|gb|AAN25404.1|AE014795_6 translation
initiation factor If-2 [Bifidobacterium longum NCC2705]
Length = 954
Score = 47.0 bits (110), Expect = 3e-04
Identities = 34/79 (43%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 236 GGKKHRPRQGQGQGPGTARFQQGRGGTGTSGQRGPRAGPWTGRGPGWNGPTGHANPAHGC 415
GG+ RP QGQGQG G F+ GR G G GQ GPR G W PG G + A G
Sbjct: 224 GGRPGRPGQGQGQGRG---FRGGRPGQG--GQGGPRPGQWGHNRPGQGGGSQGAGQG-GA 277
Query: 416 *RTWRRAHGGN---AGAGA 463
+R GG G GA
Sbjct: 278 RGGFRGGQGGGNNFQGGGA 296
