Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002880A_C01 KCC002880A_c01
(686 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD33925.1| proline rich protein 3 [Cicer arietinum] 91 2e-17
ref|NP_683582.2| RNA binding protein, putative [Arabidopsis thal... 88 1e-16
dbj|BAB01713.1| gene_id:MXL8.7~unknown protein [Arabidopsis thal... 72 6e-12
ref|NP_587917.1| RNA binding protein [Schizosaccharomyces pombe]... 56 4e-07
ref|NP_014202.1| Protein involved in regulation of cell size; Wh... 56 4e-07
>emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 90.5 bits (223), Expect = 2e-17
Identities = 45/119 (37%), Positives = 70/119 (58%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
F+GNL ++++E E+R LFS PGF+Q+K++R + T+ F+EF+D SA VH+ Q A++
Sbjct: 183 FIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVI 242
Query: 182 NSSDRGPIRVQFSKNPFGRKRDVDGRVIETPNQREGIVPATGSNPGSAPYSVAGVGGAP 358
SS +R+Q+SKNPFG+++D G+ P +V G GAP
Sbjct: 243 PSSGSVGMRIQYSKNPFGKRKD-----------------------GNFPMAVPGANGAP 278
Score = 35.4 bits (80), Expect = 0.82
Identities = 19/83 (22%), Positives = 36/83 (42%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
F+ L + V E E+++L PGF +L + +GF F AI + Q+ +
Sbjct: 8 FITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMGFALFSSPHQAIAAKDILQDMLF 67
Query: 182 NSSDRGPIRVQFSKNPFGRKRDV 250
+ + + + +K KR +
Sbjct: 68 DPDSKSVLHTEMAKKNLFVKRGI 90
>ref|NP_683582.2| RNA binding protein, putative [Arabidopsis thaliana]
gi|13605613|gb|AAK32800.1|AF361632_1 At3g21211
[Arabidopsis thaliana] gi|23505943|gb|AAN28831.1|
At3g21211/At3g21211 [Arabidopsis thaliana]
gi|26451397|dbj|BAC42798.1| unknown protein [Arabidopsis
thaliana]
Length = 339
Score = 88.2 bits (217), Expect = 1e-16
Identities = 38/85 (44%), Positives = 62/85 (72%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
F+GNL ++++E ELRSL S PGF+Q+K++R + T+ F+EF+D SA VH+ Q A++
Sbjct: 236 FIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVI 295
Query: 182 NSSDRGPIRVQFSKNPFGRKRDVDG 256
SS +R+Q+SKNP+G++++ G
Sbjct: 296 PSSGSIGMRIQYSKNPYGKRKEGGG 320
Score = 35.4 bits (80), Expect = 0.82
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
F+ L D V E EL +L PG+ ++ + +GF F A+ + Q+ +
Sbjct: 62 FIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHMVF 121
Query: 182 NSSDRGPIRVQFSKNPFGRKRDVDG 256
++ + I + +K KR + G
Sbjct: 122 DAESKSVIHTEMAKKNLFVKRGIVG 146
>dbj|BAB01713.1| gene_id:MXL8.7~unknown protein [Arabidopsis thaliana]
Length = 317
Score = 72.4 bits (176), Expect = 6e-12
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
F+GNL ++++E ELRSL S PGF+Q+K++R + T+ F+EF+D SA VH+ Q A++
Sbjct: 236 FIGNLGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVI 295
Query: 182 NSSDRGPIRVQF 217
SS +R+Q+
Sbjct: 296 PSSGSIGMRIQY 307
Score = 35.4 bits (80), Expect = 0.82
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
F+ L D V E EL +L PG+ ++ + +GF F A+ + Q+ +
Sbjct: 62 FIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHMVF 121
Query: 182 NSSDRGPIRVQFSKNPFGRKRDVDG 256
++ + I + +K KR + G
Sbjct: 122 DAESKSVIHTEMAKKNLFVKRGIVG 146
>ref|NP_587917.1| RNA binding protein [Schizosaccharomyces pombe]
gi|26399672|sp|O74452|SCW1_SCHPO Cell wall integrity
protein scw1 (Strong cell wall protein 1)
gi|7493332|pir||T41097 RNA binding protein - fission
yeast (Schizosaccharomyces pombe)
gi|3560261|emb|CAA20746.1| SPCC16C4.07
[Schizosaccharomyces pombe]
Length = 561
Score = 56.2 bits (134), Expect = 4e-07
Identities = 31/78 (39%), Positives = 43/78 (54%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITVHNAQQNAML 181
+VGNL S E EL+ LFS G+++L + FVEF++ A+ Q L
Sbjct: 429 YVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNLQGVCL 488
Query: 182 NSSDRGPIRVQFSKNPFG 235
+SS +G IR+ FSKNP G
Sbjct: 489 SSSIKGGIRLSFSKNPLG 506
>ref|NP_014202.1| Protein involved in regulation of cell size; Whi3p [Saccharomyces
cerevisiae] gi|465481|sp|P34761|WHI3_YEAST WHI3 protein
gi|2133207|pir||S50734 WHI3 protein - yeast
(Saccharomyces cerevisiae) gi|393077|gb|AAA03320.1|
Whi3p gi|600068|emb|CAA55511.1| N1382 [Saccharomyces
cerevisiae] gi|1302195|emb|CAA96092.1| WHI3
[Saccharomyces cerevisiae]
Length = 661
Score = 56.2 bits (134), Expect = 4e-07
Identities = 39/106 (36%), Positives = 47/106 (43%), Gaps = 10/106 (9%)
Frame = +2
Query: 2 FVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLG-------FVEFDDTG---SAIT 151
+VGNL E ELR LFSG GFR+L + G FVEFDD A+
Sbjct: 541 YVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATRALA 600
Query: 152 VHNAQQNAMLNSSDRGPIRVQFSKNPFGRKRDVDGRVIETPNQREG 289
+Q S +G IR+ FSKNP G + PN R G
Sbjct: 601 ELYGRQLPRSTVSSKGGIRLSFSKNPLG---------VRGPNSRRG 637
