Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002879A_C01 KCC002879A_c01
(536 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_071733.1| chromosome 11 open reading frame 24 [Homo sapie... 38 0.074
gb|AAH11765.1| Chromosome 11 open reading frame 24 [Homo sapiens... 38 0.074
ref|NP_031907.2| dentatorubral pallidoluysian atrophy [Mus muscu... 38 0.096
dbj|BAB15254.1| unnamed protein product [Homo sapiens] 38 0.096
sp|P45481|CBP_MOUSE CREB-binding protein gi|481698|pir||S39161 C... 37 0.13
>ref|NP_071733.1| chromosome 11 open reading frame 24 [Homo sapiens]
gi|11527205|gb|AAG36936.1|AF264781_1 DM4E3 [Homo
sapiens]
Length = 449
Score = 38.1 bits (87), Expect = 0.074
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 4/164 (2%)
Frame = +3
Query: 57 TRPMGPSPIPSSTGRGCSPLTRPHSSDMTHPATLLALCAPVLNILPKDPNLPSML----A 224
TRP +PS T P RP + P + +++ PV+N K +PS A
Sbjct: 229 TRPSPSKHMPSDTAASPVPPMRPQAQG---PISQVSVDQPVVNTTNKSTPMPSNTTPEPA 285
Query: 225 HLS*TLSIAVWSAKSPQPGDVTSPHDTTAPRHSLRRPLRQPTPVDTGHKRSARDTVLGGP 404
++ A+ P V PH + P P QP+P+ + + T
Sbjct: 286 PTPTVVTTTKAQAREPTASPVPVPHTSPIPEMEAMSPTTQPSPMPYTQRAAGPGT----- 340
Query: 405 RQAGHAPDTLHGNAGAGTNMPLYAARSACSRRACRTSRARGGAQ 536
AP+ + A GT+ RS+ + T + Q
Sbjct: 341 ---SQAPEQVETEATPGTDSTGPTPRSSGGTKMPATDSCQPSTQ 381
>gb|AAH11765.1| Chromosome 11 open reading frame 24 [Homo sapiens]
gi|37182627|gb|AAQ89114.1| C11orf24 [Homo sapiens]
Length = 449
Score = 38.1 bits (87), Expect = 0.074
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 4/164 (2%)
Frame = +3
Query: 57 TRPMGPSPIPSSTGRGCSPLTRPHSSDMTHPATLLALCAPVLNILPKDPNLPSML----A 224
TRP +PS T P RP + P + +++ PV+N K +PS A
Sbjct: 229 TRPSPSKHMPSDTAASPVPPMRPQAQG---PISQVSVDQPVVNTTNKSTPMPSNTTPEPA 285
Query: 225 HLS*TLSIAVWSAKSPQPGDVTSPHDTTAPRHSLRRPLRQPTPVDTGHKRSARDTVLGGP 404
++ A+ P V PH + P P QP+P+ + + T
Sbjct: 286 PTPTVVTTTKAQAREPTASPVPVPHTSPIPEMEAMSPTTQPSPMPYTQRAAGPGT----- 340
Query: 405 RQAGHAPDTLHGNAGAGTNMPLYAARSACSRRACRTSRARGGAQ 536
AP+ + A GT+ RS+ + T + Q
Sbjct: 341 ---SQAPEQVETEATPGTDSTGPTPRSSGGTKMPATDSCQPSTQ 381
>ref|NP_031907.2| dentatorubral pallidoluysian atrophy [Mus musculus]
gi|2289904|gb|AAC36003.1| DRPLA [Mus musculus]
gi|31418669|gb|AAH53051.1| Dentatorubral pallidoluysian
atrophy [Mus musculus] gi|37574012|gb|AAH50920.2|
Unknown (protein for MGC:63230) [Mus musculus]
Length = 1175
Score = 37.7 bits (86), Expect = 0.096
Identities = 25/73 (34%), Positives = 30/73 (40%), Gaps = 7/73 (9%)
Frame = +2
Query: 326 AEAAAPTHTS*HRSQAFGSRHGVGGPPPGRSCTRHAPRKRRSGNQH-------APLRRTL 484
A AAPTH + HG GPPP + P S N H +P +L
Sbjct: 470 AHPAAPTHHHHQQQPQQQHHHGNSGPPPPGA----YPHPLESSNSHHAHPYNMSPSLGSL 525
Query: 485 RMQPPGVSHFPCP 523
R PPG +H P P
Sbjct: 526 RPYPPGPAHLPPP 538
>dbj|BAB15254.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 37.7 bits (86), Expect = 0.096
Identities = 46/163 (28%), Positives = 63/163 (38%), Gaps = 16/163 (9%)
Frame = +3
Query: 51 LVTRPMGPSPIPSSTGRGCSPLTRPHSSDMT-----HPATLLALCAPVLNILPKDPNLPS 215
L T P+ P P ++ G +P + S M+ P L AP+L + P P P+
Sbjct: 284 LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 343
Query: 216 MLAHLS*TLSIAVWSAKSPQPGDVTSPHDTTAPRHSLRRPLRQPTPVDTGHKRSARDTVL 395
+ A + P PG TS + PR +L P P RS T L
Sbjct: 344 LQA-----------PRRPPTPGPDTS---VSGPRLTLALAPGPPPP----PSRSPSST-L 384
Query: 396 GGPRQAGHA------PDTLHG-----NAGAGTNMPLYAARSAC 491
GP AGH+ P+ L G GA + P A +AC
Sbjct: 385 SGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 427
>sp|P45481|CBP_MOUSE CREB-binding protein gi|481698|pir||S39161 CREB-binding protein -
mouse gi|435855|gb|AAB28651.1| CREB-binding protein; CBP
[Mus sp.]
Length = 2441
Score = 37.4 bits (85), Expect = 0.13
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +3
Query: 63 PMGPSPIPSSTGRGCSPLTRPHSSDMT--HPATLLALCAPVLN---ILPKDPNLPSML-A 224
P+ P+P P+ST G L P + MT PA PV + P ++PS
Sbjct: 854 PLHPTPPPASTAAGMPSLQHPTAPGMTPPQPAAPTQPSTPVSSGQTPTPTPGSVPSAAQT 913
Query: 225 HLS*TLSIAVWSAKSPQPGDVTSPHDTTAPRHSLRRPLRQPTPVDT 362
+ T+ A + +PQP P P+ S +QPTPV T
Sbjct: 914 QSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSS----QQQPTPVHT 955
