Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002835A_C01 KCC002835A_c01
(594 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00014200.1| COG0378: Ni2+-binding GTPase involved in regu... 38 0.12
ref|NP_253566.1| conserved hypothetical protein [Pseudomonas aer... 37 0.16
dbj|BAA76335.1| transposase [Rhodococcus sp. CIR2] 37 0.16
gb|AAG53080.1|AF263824_1 5'A2rel-related protein [Leishmania don... 36 0.46
ref|NP_250973.1| hypothetical protein [Pseudomonas aeruginosa PA... 35 0.60
>ref|ZP_00014200.1| COG0378: Ni2+-binding GTPase involved in regulation of expression
and maturation of urease and hydrogenase [Rhodospirillum
rubrum]
Length = 387
Score = 37.7 bits (86), Expect = 0.12
Identities = 20/38 (52%), Positives = 27/38 (70%), Gaps = 2/38 (5%)
Frame = -2
Query: 590 HSSATGILAINVVLMPGS--SIMLAATIKAMPAGTRNA 483
H A GILA+N++ PGS + +L ATI+A+PAG R A
Sbjct: 188 HFDARGILAVNLMSSPGSGKTSLLEATIQALPAGVRVA 225
>ref|NP_253566.1| conserved hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11348254|pir||A83036 conserved hypothetical protein
PA4879 [imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9951153|gb|AAG08264.1|AE004901_6 conserved
hypothetical protein [Pseudomonas aeruginosa PAO1]
Length = 689
Score = 37.4 bits (85), Expect = 0.16
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 62 VAFSFTFQCS*KVPSLLYK-----GRLLAVS-NAAAAWRCSAEVKG-RRW-PWPRSAPPQ 217
V F TF + P+L K R A++ N A AWR +G R W PWPR +
Sbjct: 23 VVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAED 82
Query: 218 VQRGGPVWTAGAPWTSQ 268
+ G P WTAG S+
Sbjct: 83 ITLGNPEWTAGKTKASE 99
>dbj|BAA76335.1| transposase [Rhodococcus sp. CIR2]
Length = 418
Score = 37.4 bits (85), Expect = 0.16
Identities = 27/76 (35%), Positives = 30/76 (38%)
Frame = +2
Query: 149 AAWRCSAEVKGRRWPWPRSAPPQVQRGGPVWTAGAPWTSQHPFWRGAALPSGLHGLYL*T 328
A WR S +GRR P+ RG P T P T HP WR P L
Sbjct: 328 AGWRRSP-TRGRRARRRSPTAPRTNRGRPA-TGRTPTTRHHPRWRSRPGPGSLGS----- 380
Query: 329 PRPRAQRRPASKRLRA 376
PR RRP R R+
Sbjct: 381 --PRRSRRPRRARARS 394
>gb|AAG53080.1|AF263824_1 5'A2rel-related protein [Leishmania donovani]
Length = 1614
Score = 35.8 bits (81), Expect = 0.46
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 13/117 (11%)
Frame = +2
Query: 239 WTAGAPWTSQHPFWRG-----AALPSGLHGLYL*TPRPRAQRRPASKRLRAWTKWLPSSR 403
W AG +S HP RG + +G HG+ L + A + RA +SR
Sbjct: 628 WVAGDGASSLHPSRRGNDRHSKSSATGAHGVVL---QAAASEADMANEARAGDDVARASR 684
Query: 404 LKRRVEPAPSTRT--------TGTTRGLGPGGSSARSWCPPALPLSWPLT*WRSPAS 550
+R + S R G RG P + R PP P L WRS AS
Sbjct: 685 ERRELPATASLRDGVAAALELDGARRGAAPPNDAPRHVKPPPPPQRRALDRWRSQAS 741
>ref|NP_250973.1| hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11349499|pir||G83359 hypothetical protein PA2283
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9948313|gb|AAG05671.1|AE004654_2 hypothetical protein
PA2283 [Pseudomonas aeruginosa PAO1]
Length = 485
Score = 35.4 bits (80), Expect = 0.60
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 178 GKKMAMASLSTAASPARRASMDCRRSMDLTAPVLARRCAA-QRTSRLVPLNAAAEGTTSS 354
GK A+AS AA+ R D RRSM A +L A +R RLVPL+A +
Sbjct: 101 GKLCALASALVAAALLARLEYDGRRSMRSQAYLLGHLAPAWRRLGRLVPLHAGLLVAALA 160
Query: 355 SQQAFESV 378
SQ +E++
Sbjct: 161 SQLLYEAL 168
