KCC002831A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002831A_C01 KCC002831A_c01
gcgtcttcatcactcttccaaccgcaccgttattcgaaggaggaaaggggaaaccccact
tgttgattgaaaatgcaggcGCTTCAGCGTAGCGCCAAGACTCTGCCGACCACCAGCCAG
CGTGTTCGTGAGATTGCAGCTGTCACTTCGGCTCCTCGTGCTGTGGCTGGCCCTCTGTCC
GCGCGCACGACTGCACCTCTCGTGCAGCCGGTCTCGGCGCCCCTTGCCTCCGGCCGTCGT
GTGGAGGCTCGCGCAGCGTCTACTGCTTCCGCTCCCAAGTCAAGCAAGGGAAACGCACCG
ATGGCTGTCGCTGAAATCGGTCTGGTTGGCCTGGCGGTCATGGGCCAGAACTTGGCCCTG
AACATCGCGGAGAAGGGCTTTCCCATTTCGGTCTACAACCGTAGCTATGACAAGACTGAG
GCCGCGGTGAAGCGCGCTCAGAAGGAGGGCCTGGGCGAGAAGCTGCACGGCTACGAGCAA
GTCAAGGACTTTGTGCAGAGCCTGCAGAGGCCCCGGCGCGTCATCATCCTGGTGAAGGCC
GGCGCGCCCGTGGACCAGACCATTGACCAACTGTGCGAGTTCATGGAGCCTGGTGACATC
ATCATTGACGGCGGCAACGAGTGGTACGAGAACACGGAGAAGCGCATGGCCAAGGTTGCC
GCCAAGGGCATCCTGTACATGGGCATGGGCGTGTCCGGCGGCGAGGAGGGCCGCCGCAGG
GGTCCCTCCATGATGCCCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002831A_C01 KCC002831A_c01
         (740 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL76323.1|AF394513_1 6-phosphogluconate dehydrogenase [Chlam...   290  2e-77
gb|AAK49897.1|AF295670_1 plastidic 6-phosphogluconate dehydrogen...   196  2e-49
ref|NP_176601.1| 6-phosphogluconate dehydrogenase -related [Arab...   196  4e-49
ref|NP_198982.1| 6-phosphogluconate dehydrogenase [Arabidopsis t...   195  7e-49
gb|AAM61057.1| 6-phosphogluconate dehydrogenase [Arabidopsis tha...   194  1e-48

>gb|AAL76323.1|AF394513_1 6-phosphogluconate dehydrogenase [Chlamydomonas reinhardtii]
          Length = 490

 Score =  290 bits (741), Expect = 2e-77
 Identities = 145/146 (99%), Positives = 145/146 (99%)
 Frame = +1

Query: 301 MAVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEAAVKRAQKEGLGEKLHGYEQ 480
           MAVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEAAVKRAQKEGLGEKLHGYEQ
Sbjct: 1   MAVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEAAVKRAQKEGLGEKLHGYEQ 60

Query: 481 VKDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDIIIDGGNEWYENTEKRMAKVA 660
           VKDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDIIIDGGNEWYENTEKRMAKVA
Sbjct: 61  VKDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDIIIDGGNEWYENTEKRMAKVA 120

Query: 661 AKGILYMGMGVSGGEEGRRRGPSMMP 738
           AKGILYMGMGVSGGEEG RRGPSMMP
Sbjct: 121 AKGILYMGMGVSGGEEGARRGPSMMP 146

>gb|AAK49897.1|AF295670_1 plastidic 6-phosphogluconate dehydrogenase [Spinacia oleracea]
          Length = 537

 Score =  196 bits (499), Expect = 2e-49
 Identities = 100/165 (60%), Positives = 123/165 (73%), Gaps = 4/165 (2%)
 Frame = +1

Query: 256 ASTASAPKSSKGN----APMAVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEA 423
           +S    P SS       + MA ++IGLVGLAVMGQNLALNIAEKGFPISVYNR+  K + 
Sbjct: 27  SSPTPLPHSSSSTFSLFSTMAASQIGLVGLAVMGQNLALNIAEKGFPISVYNRTASKVDE 86

Query: 424 AVKRAQKEGLGEKLHGYEQVKDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDII 603
            + RA+ EG    L G+   +DFV S++RPR ++ILVKAG+PVDQTI  L  FMEPGD I
Sbjct: 87  TLDRAKSEG-DLPLSGHYTPRDFVLSIERPRSIVILVKAGSPVDQTIASLASFMEPGDTI 145

Query: 604 IDGGNEWYENTEKRMAKVAAKGILYMGMGVSGGEEGRRRGPSMMP 738
           IDGGNEWY+NTE+R++   + G+LY+GMGVSGGEEG R GPS+MP
Sbjct: 146 IDGGNEWYQNTERRLSDAHSNGLLYLGMGVSGGEEGARFGPSLMP 190

>ref|NP_176601.1| 6-phosphogluconate dehydrogenase -related [Arabidopsis thaliana]
           gi|6692095|gb|AAF24560.1|AC007764_2 F22C12.5
           [Arabidopsis thaliana] gi|28416567|gb|AAO42814.1|
           At1g64190 [Arabidopsis thaliana]
          Length = 487

 Score =  196 bits (497), Expect = 4e-49
 Identities = 97/145 (66%), Positives = 115/145 (78%)
 Frame = +1

Query: 304 AVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEAAVKRAQKEGLGEKLHGYEQV 483
           A++ IGL GLAVMGQNLALNIAEKGFPISVYNR+  K +  + RA  EG    + G    
Sbjct: 5   ALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAAVEG-NLPVSGQYSP 63

Query: 484 KDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDIIIDGGNEWYENTEKRMAKVAA 663
           +DFV S+QRPR +IILVKAGAPVDQTID   E+MEPGD IIDGGNEWY+NTE+R+++   
Sbjct: 64  RDFVLSIQRPRSLIILVKAGAPVDQTIDAFSEYMEPGDCIIDGGNEWYQNTERRISEAEQ 123

Query: 664 KGILYMGMGVSGGEEGRRRGPSMMP 738
           KG+LY+GMGVSGGEEG R GPS+MP
Sbjct: 124 KGLLYLGMGVSGGEEGARNGPSLMP 148

>ref|NP_198982.1| 6-phosphogluconate dehydrogenase [Arabidopsis thaliana]
           gi|30693852|ref|NP_851113.1| 6-phosphogluconate
           dehydrogenase [Arabidopsis thaliana]
           gi|10178021|dbj|BAB11473.1| 6-phosphogluconate
           dehydrogenase [Arabidopsis thaliana]
           gi|21928135|gb|AAM78095.1| AT5g41670/MBK23_20
           [Arabidopsis thaliana] gi|25090301|gb|AAN72272.1|
           At5g41670/MBK23_20 [Arabidopsis thaliana]
          Length = 487

 Score =  195 bits (495), Expect = 7e-49
 Identities = 97/146 (66%), Positives = 115/146 (78%)
 Frame = +1

Query: 301 MAVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEAAVKRAQKEGLGEKLHGYEQ 480
           +A++ IGL GLAVMGQNLALNIA+KGFPISVYNR+  K +  + RA  EG    + G   
Sbjct: 4   VALSRIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGK-LPVAGQYS 62

Query: 481 VKDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDIIIDGGNEWYENTEKRMAKVA 660
            +DFV S+QRPR VIILVKAGAPVDQTI  L E+MEPGD IIDGGNEWY+NTE+R+ +  
Sbjct: 63  PRDFVLSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVEAE 122

Query: 661 AKGILYMGMGVSGGEEGRRRGPSMMP 738
            KG+LY+GMGVSGGEEG R GPS+MP
Sbjct: 123 KKGLLYLGMGVSGGEEGARNGPSLMP 148

>gb|AAM61057.1| 6-phosphogluconate dehydrogenase [Arabidopsis thaliana]
          Length = 486

 Score =  194 bits (493), Expect = 1e-48
 Identities = 97/146 (66%), Positives = 115/146 (78%)
 Frame = +1

Query: 301 MAVAEIGLVGLAVMGQNLALNIAEKGFPISVYNRSYDKTEAAVKRAQKEGLGEKLHGYEQ 480
           +A++ IGL GLAVMGQNLALNIA+KGFPISVYNR+  K +  + RA  EG    + G   
Sbjct: 4   VALSRIGLAGLAVMGQNLALNIADKGFPISVYNRTTPKVDETLDRASNEGK-LPVAGQYS 62

Query: 481 VKDFVQSLQRPRRVIILVKAGAPVDQTIDQLCEFMEPGDIIIDGGNEWYENTEKRMAKVA 660
            +DFV S+QRPR VIILVKAGAPVDQTI  L E+MEPGD IIDGGNEWY+NTE+R+ +  
Sbjct: 63  PRDFVLSIQRPRSVIILVKAGAPVDQTITALSEYMEPGDCIIDGGNEWYQNTERRIVEAE 122

Query: 661 AKGILYMGMGVSGGEEGRRRGPSMMP 738
            KG+LY+GMGVSGGEEG R GPS+MP
Sbjct: 123 KKGLLYLGMGVSGGEEGARNGPSLMP 148



EST assemble image


clone accession position
1 MXL045a12_r BP095641 1 387
2 LC018a06_r AV620133 229 740
3 MXL052f09_r BP096099 247 702




Chlamydomonas reinhardtii
Kazusa DNA Research Institute