Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002830A_C01 KCC002830A_c01
(512 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179095.1| arabinogalactan-protein (AGP9) [Arabidopsis tha... 45 4e-04
gb|AAG40020.2|AF324669_1 At2g14890 [Arabidopsis thaliana] 45 4e-04
gb|AAP36977.1| Homo sapiens homeo box A3 [synthetic construct] 44 0.002
ref|NP_109377.1| homeobox A3 protein isoform a; homeobox protein... 44 0.002
ref|NP_900817.1| hypothetical protein CV1147 [Chromobacterium vi... 43 0.002
>ref|NP_179095.1| arabinogalactan-protein (AGP9) [Arabidopsis thaliana]
gi|25296190|pir||F84522 probable proline-rich protein
[imported] - Arabidopsis thaliana
gi|3650031|gb|AAC61286.1| putative proline-rich protein
[Arabidopsis thaliana]
gi|10880495|gb|AAG24277.1|AF195890_1 arabinogalactan
protein [Arabidopsis thaliana]
gi|11908042|gb|AAG41450.1|AF326868_1 putative
proline-rich protein [Arabidopsis thaliana]
gi|12642860|gb|AAK00372.1|AF339690_1 putative
proline-rich protein [Arabidopsis thaliana]
gi|19310460|gb|AAL84965.1| At2g14890/T26I20.5
[Arabidopsis thaliana] gi|21928071|gb|AAM78064.1|
At2g14890/T26I20.5 [Arabidopsis thaliana]
Length = 191
Score = 45.4 bits (106), Expect = 4e-04
Identities = 31/95 (32%), Positives = 42/95 (43%), Gaps = 4/95 (4%)
Frame = -3
Query: 489 TTRPP*TQPPRPNRAPAPLACTWCWTGCVPSASPPRQAPPTMQPAPARTRLLLPQATPAA 310
TT PP PP P +P P + V S PP +PP P P T P A+P A
Sbjct: 62 TTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPA 121
Query: 309 Q----TWTRQVQSRAPTPASTGSDEADSAKGTSKE 217
Q T + S +P+P+S+ + A G S +
Sbjct: 122 QVPAPAPTTKPDSPSPSPSSSPPLPSSDAPGPSTD 156
>gb|AAG40020.2|AF324669_1 At2g14890 [Arabidopsis thaliana]
Length = 191
Score = 45.4 bits (106), Expect = 4e-04
Identities = 31/95 (32%), Positives = 42/95 (43%), Gaps = 4/95 (4%)
Frame = -3
Query: 489 TTRPP*TQPPRPNRAPAPLACTWCWTGCVPSASPPRQAPPTMQPAPARTRLLLPQATPAA 310
TT PP PP P +P P + V S PP +PP P P T P A+P A
Sbjct: 62 TTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPA 121
Query: 309 Q----TWTRQVQSRAPTPASTGSDEADSAKGTSKE 217
Q T + S +P+P+S+ + A G S +
Sbjct: 122 QVPAPAPTTKPDSPSPSPSSSPPLPSSDAPGPSTD 156
>gb|AAP36977.1| Homo sapiens homeo box A3 [synthetic construct]
Length = 444
Score = 43.5 bits (101), Expect = 0.002
Identities = 38/116 (32%), Positives = 48/116 (40%)
Frame = -3
Query: 480 PP*TQPPRPNRAPAPLACTWCWTGCVPSASPPRQAPPTMQPAPARTRLLLPQATPAAQTW 301
PP QPP+P AP P A T SASPP+ A PA A LL T A Q +
Sbjct: 99 PPAPQPPQP--APQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIF 156
Query: 300 TRQVQSRAPTPASTGSDEADSAKGTSKERSGASKRHCFADSTSRRERTLMVPAKTV 133
+SR T T S + + K G ++S+R RT A+ V
Sbjct: 157 PWMKESRQNTKQKTSSSSSGESCAGDKSPPG--------QASSKRARTAYTSAQLV 204
>ref|NP_109377.1| homeobox A3 protein isoform a; homeobox protein HOX-A3; homeo box
1E; Hox-1.5-like protein [Homo sapiens]
gi|24497513|ref|NP_705895.1| homeobox A3 protein isoform
a; homeobox protein HOX-A3; homeo box 1E; Hox-1.5-like
protein [Homo sapiens] gi|6016293|sp|O43365|HXA3_HUMAN
Homeobox protein Hox-A3 (Hox-1E)
gi|15929500|gb|AAH15180.1| Homeobox A3 protein, isoform
a [Homo sapiens]
Length = 443
Score = 43.5 bits (101), Expect = 0.002
Identities = 38/116 (32%), Positives = 48/116 (40%)
Frame = -3
Query: 480 PP*TQPPRPNRAPAPLACTWCWTGCVPSASPPRQAPPTMQPAPARTRLLLPQATPAAQTW 301
PP QPP+P AP P A T SASPP+ A PA A LL T A Q +
Sbjct: 99 PPAPQPPQP--APQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIF 156
Query: 300 TRQVQSRAPTPASTGSDEADSAKGTSKERSGASKRHCFADSTSRRERTLMVPAKTV 133
+SR T T S + + K G ++S+R RT A+ V
Sbjct: 157 PWMKESRQNTKQKTSSSSSGESCAGDKSPPG--------QASSKRARTAYTSAQLV 204
>ref|NP_900817.1| hypothetical protein CV1147 [Chromobacterium violaceum ATCC 12472]
gi|34102456|gb|AAQ58822.1| hypothetical protein CV1147
[Chromobacterium violaceum ATCC 12472]
Length = 306
Score = 43.1 bits (100), Expect = 0.002
Identities = 39/123 (31%), Positives = 53/123 (42%), Gaps = 4/123 (3%)
Frame = -1
Query: 422 GAGPAVCRARPHRGRPRRPCNRPPRVHACCCPRPRLPPRRGRARYKAVLRRQPPPAATRL 243
G PA +ARP + + RR RP R H PRR RA R++PPPAA RL
Sbjct: 180 GQQPAQAQARPDQIQGRRHQQRPQRRH----------PRRRRA----ARRQRPPPAAARL 225
Query: 242 TPQRVRAKSVAAR----RSDIVLPTRPRDESGL*WYRLRRCAPSDGNYSIIGDCKHVRCA 75
Q++ A+ R R V RP+ +G + N ++ H RC
Sbjct: 226 ARQQLPAQQAVRRETRQRQCRVRTARPQGHAG---------DKAQENQQLL----HPRCG 272
Query: 74 NHA 66
+HA
Sbjct: 273 SHA 275
