Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002821A_C01 KCC002821A_c01
(470 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||JE0352 mucin MUC5B, tracheobronchial - human gi|3789927|gb|... 28 0.32
gb|AAO12697.1| core [Hepatitis B virus] 35 0.57
gb|AAO12703.1| core [Hepatitis B virus] gi|27466470|gb|AAO12709.... 35 0.57
gb|AAO12702.1| precore [Hepatitis B virus] gi|27466469|gb|AAO127... 35 0.57
gb|AAO12696.1| precore [Hepatitis B virus] 35 0.57
>pir||JE0352 mucin MUC5B, tracheobronchial - human gi|3789927|gb|AAC67545.1|
mucin [Homo sapiens]
Length = 1321
Score = 28.1 bits (61), Expect(2) = 0.32
Identities = 13/29 (44%), Positives = 16/29 (54%), Gaps = 3/29 (10%)
Frame = -2
Query: 154 CVVPPGLTKH---GCESGKGCRCVHKMVT 77
CV PPGL GC + + C CV+K T
Sbjct: 834 CVCPPGLVSDGSGGCIAEEDCPCVNKEAT 862
Score = 26.2 bits (56), Expect(2) = 0.32
Identities = 15/51 (29%), Positives = 24/51 (46%)
Frame = -1
Query: 392 CTCMGGERTALGCCLRGCTD*DCDIIHLEPGSSKTHTQFLRTTPLDARCIG 240
C+C GG+ + LG L+ T +++L+ +S T L A C G
Sbjct: 773 CSCTGGKLSCLGASLQKSTGCAAPMVYLDCSNSSAGT-------LGAECDG 816
>gb|AAO12697.1| core [Hepatitis B virus]
Length = 185
Score = 34.7 bits (78), Expect = 0.57
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = +1
Query: 4 LCCYIMLSLLCWLPNNLSHPCSRLLSPSYVHT 99
LCC +++L W+ NNL P SR L +YV+T
Sbjct: 60 LCCGELMTLATWVGNNLQDPASRDLVVNYVNT 91
>gb|AAO12703.1| core [Hepatitis B virus] gi|27466470|gb|AAO12709.1| core [Hepatitis
B virus]
Length = 185
Score = 34.7 bits (78), Expect = 0.57
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = +1
Query: 4 LCCYIMLSLLCWLPNNLSHPCSRLLSPSYVHT 99
LCC +++L W+ NNL P SR L +YV+T
Sbjct: 60 LCCGELMTLATWVGNNLQDPASRDLVVNYVNT 91
>gb|AAO12702.1| precore [Hepatitis B virus] gi|27466469|gb|AAO12708.1| precore
[Hepatitis B virus]
Length = 214
Score = 34.7 bits (78), Expect = 0.57
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = +1
Query: 4 LCCYIMLSLLCWLPNNLSHPCSRLLSPSYVHT 99
LCC +++L W+ NNL P SR L +YV+T
Sbjct: 89 LCCGELMTLATWVGNNLQDPASRDLVVNYVNT 120
>gb|AAO12696.1| precore [Hepatitis B virus]
Length = 214
Score = 34.7 bits (78), Expect = 0.57
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = +1
Query: 4 LCCYIMLSLLCWLPNNLSHPCSRLLSPSYVHT 99
LCC +++L W+ NNL P SR L +YV+T
Sbjct: 89 LCCGELMTLATWVGNNLQDPASRDLVVNYVNT 120
