KCC002801A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002801A_C01 KCC002801A_c01
aagtcctctgccaaaatggcgaatccggagacagcagcagtcgcaatcaacgtgctcaat
aaggtcatccgctatgctgtGGGACTAGGAGTGGGCGCGAGCATCCTCCAAACATCCCTC
TACAATGTGGATGGCGGTGAGCGCGCCATTATTTTCGACCGTTTCCGTGGAGTTCTGGAT
GAGCCGGTTGGCGAGGGGACGCACTTCCGGGTCCCCTGGGTCCAGCAGCCAAACATCATG
GACATCCGCACGCGGCCGCGCAGCATCAGCTCGGTGACTGGTACCAAGGATCTCCAAATG
GTGAATATGTCGCTGCGAATCCTTAGCAAGCCGGACGAGCCGCGGCTGCCGCACATCTTC
AAGACCCTGGGCATGGACTGGGAGGAGCGCGTGCTGCCGTCCATCGGCAATGAGGTGGTG
AAGGCGGTGGTGGCGCAGTACAACGCGGAGCAGCTCATCACGCAGCGTGAGAGGGTGTCT
CGGTCGGTGCGCGAGTCGTTGATGGCGCGCGCGGCGGACTTCGGCATCGTGCTGGACGAC
GTGGCCATCACGCACCTGTCCTTTGGCACGGAGTTCACCCGCGCCGTCGAGGCGAAGCAG
GTTGCGGAGCAGGACGCGGAGCGCGCCAAGTTTGTGGTGATGAAGGCGGAGCAGGAGCGC
AATGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002801A_C01 KCC002801A_c01
         (666 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T03843 prohibitin - common tobacco gi|1946329|gb|AAC49690.1...   294  9e-79
ref|NP_198893.1| prohibitin (gb|AAC49691.1) [Arabidopsis thalian...   288  4e-77
ref|NP_189364.1| prohibitin -related [Arabidopsis thaliana] gi|9...   280  1e-74
gb|AAM64845.1| prohibitin, putative [Arabidopsis thaliana]            280  2e-74
gb|AAO23637.1| At3g27280 [Arabidopsis thaliana]                       278  4e-74

>pir||T03843 prohibitin - common tobacco gi|1946329|gb|AAC49690.1| prohibitin
           [Nicotiana tabacum]
          Length = 279

 Score =  294 bits (752), Expect = 9e-79
 Identities = 142/212 (66%), Positives = 183/212 (85%)
 Frame = +1

Query: 31  TAAVAINVLNKVIRYAVGLGVGASILQTSLYNVDGGERAIIFDRFRGVLDEPVGEGTHFR 210
           ++  A++ L  V R A GLG+ A++L +SLY VDGG+RA++FDRFRGV+D+ VGEGTHF 
Sbjct: 3   SSQAAVSFLTNVARAAFGLGISATVLNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTHFL 62

Query: 211 VPWVQQPNIMDIRTRPRSISSVTGTKDLQMVNMSLRILSKPDEPRLPHIFKTLGMDWEER 390
           VPW+Q+P I DIRTRP + SSV+GTKDLQMV+++LR+LS+P+  RLP IFKTLG++++E+
Sbjct: 63  VPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVHLTLRVLSRPEVARLPAIFKTLGLEYDEK 122

Query: 391 VLPSIGNEVVKAVVAQYNAEQLITQRERVSRSVRESLMARAADFGIVLDDVAITHLSFGT 570
           VLPSIGNEV+KAVVAQ+NA+QL+T+R +VS  VRESL+ RA DF IVLDDVAITHLS+G 
Sbjct: 123 VLPSIGNEVLKAVVAQFNADQLLTERPQVSALVRESLIRRAKDFNIVLDDVAITHLSYGA 182

Query: 571 EFTRAVEAKQVAEQDAERAKFVVMKAEQERNA 666
           EF++AVE KQVA+Q+AER+KFVVMKAEQER A
Sbjct: 183 EFSKAVEQKQVAQQEAERSKFVVMKAEQERRA 214

>ref|NP_198893.1| prohibitin (gb|AAC49691.1) [Arabidopsis thaliana]
           gi|1946331|gb|AAC49691.1| prohibitin [Arabidopsis
           thaliana] gi|4097692|gb|AAD00157.1| prohibitin 3
           gi|9758371|dbj|BAB08838.1| prohibitin [Arabidopsis
           thaliana] gi|15450838|gb|AAK96690.1| prohibitin
           [Arabidopsis thaliana] gi|21387093|gb|AAM47950.1|
           prohibitin [Arabidopsis thaliana]
           gi|21593231|gb|AAM65180.1| prohibitin [Arabidopsis
           thaliana]
          Length = 277

 Score =  288 bits (738), Expect = 4e-77
 Identities = 138/208 (66%), Positives = 181/208 (86%)
 Frame = +1

Query: 43  AINVLNKVIRYAVGLGVGASILQTSLYNVDGGERAIIFDRFRGVLDEPVGEGTHFRVPWV 222
           A++ L+ + + A GLG  A++L TSL+ VDGGERA+IFDRFRGV+D+ VGEGTHF +P +
Sbjct: 7   AVSFLSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQTVGEGTHFLIPIL 66

Query: 223 QQPNIMDIRTRPRSISSVTGTKDLQMVNMSLRILSKPDEPRLPHIFKTLGMDWEERVLPS 402
           Q+P+I DIRT+P + SS++GTKDLQMVN++LR+LS+P+  RLP+IF+TLG++++E+VLPS
Sbjct: 67  QRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPS 126

Query: 403 IGNEVVKAVVAQYNAEQLITQRERVSRSVRESLMARAADFGIVLDDVAITHLSFGTEFTR 582
           IGNEV+KAVVAQ+NA+QL+T+R  VS  VRESL+ RA DF IVLDDVAITHLS+G EF+R
Sbjct: 127 IGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLDDVAITHLSYGVEFSR 186

Query: 583 AVEAKQVAEQDAERAKFVVMKAEQERNA 666
           AVE KQVA+Q+AER+KFVVMKA+QER A
Sbjct: 187 AVEQKQVAQQEAERSKFVVMKADQERRA 214

>ref|NP_189364.1| prohibitin -related [Arabidopsis thaliana]
           gi|9294221|dbj|BAB02123.1| prohibitin [Arabidopsis
           thaliana]
          Length = 279

 Score =  280 bits (716), Expect = 1e-74
 Identities = 135/209 (64%), Positives = 179/209 (85%)
 Frame = +1

Query: 40  VAINVLNKVIRYAVGLGVGASILQTSLYNVDGGERAIIFDRFRGVLDEPVGEGTHFRVPW 219
           VAI+ L  + + A GLGV A+ L +SLY VDGGERA++FDRFRGVLD+ VGEGTHF +P+
Sbjct: 6   VAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPY 65

Query: 220 VQQPNIMDIRTRPRSISSVTGTKDLQMVNMSLRILSKPDEPRLPHIFKTLGMDWEERVLP 399
           +Q P+I DIRT+P + SS +GTKDLQMVN++LR+L +P+  RLP+IF+TLG++++E+VLP
Sbjct: 66  LQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLP 125

Query: 400 SIGNEVVKAVVAQYNAEQLITQRERVSRSVRESLMARAADFGIVLDDVAITHLSFGTEFT 579
           SIGNEV+KAVVA +NA+QL+T+R +VS  VR++L+ RA +F I LDD+AITHLS+G EF+
Sbjct: 126 SIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSYGAEFS 185

Query: 580 RAVEAKQVAEQDAERAKFVVMKAEQERNA 666
           RAVEAKQVA+Q+AER+KFVVMKA+QER A
Sbjct: 186 RAVEAKQVAQQEAERSKFVVMKADQERRA 214

>gb|AAM64845.1| prohibitin, putative [Arabidopsis thaliana]
          Length = 279

 Score =  280 bits (715), Expect = 2e-74
 Identities = 135/208 (64%), Positives = 178/208 (84%)
 Frame = +1

Query: 43  AINVLNKVIRYAVGLGVGASILQTSLYNVDGGERAIIFDRFRGVLDEPVGEGTHFRVPWV 222
           AI+ L  + + A GLGV A+ L +SLY VDGGERA++FDRFRGVLD+ VGEGTHF +P++
Sbjct: 7   AISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYL 66

Query: 223 QQPNIMDIRTRPRSISSVTGTKDLQMVNMSLRILSKPDEPRLPHIFKTLGMDWEERVLPS 402
           Q P+I DIRT+P + SS +GTKDLQMVN++LR+L +P+  RLP+IF+TLG++++E+VLPS
Sbjct: 67  QTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPS 126

Query: 403 IGNEVVKAVVAQYNAEQLITQRERVSRSVRESLMARAADFGIVLDDVAITHLSFGTEFTR 582
           IGNEV+KAVVA +NA+QL+T+R +VS  VRE+L+ RA +F I LDD+AITHLS+G EF+R
Sbjct: 127 IGNEVLKAVVANFNADQLLTERPQVSALVREALIKRAREFNIELDDIAITHLSYGAEFSR 186

Query: 583 AVEAKQVAEQDAERAKFVVMKAEQERNA 666
           AVEAKQVA+Q+AER+KFVVMKA+QER A
Sbjct: 187 AVEAKQVAQQEAERSKFVVMKADQERRA 214

>gb|AAO23637.1| At3g27280 [Arabidopsis thaliana]
          Length = 279

 Score =  278 bits (712), Expect = 4e-74
 Identities = 134/209 (64%), Positives = 179/209 (85%)
 Frame = +1

Query: 40  VAINVLNKVIRYAVGLGVGASILQTSLYNVDGGERAIIFDRFRGVLDEPVGEGTHFRVPW 219
           VAI+ L  + + A GLGV A+ L +SLY VDGGERA++FDRFRGVLD+ VGEGTHF +P+
Sbjct: 6   VAISFLTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPY 65

Query: 220 VQQPNIMDIRTRPRSISSVTGTKDLQMVNMSLRILSKPDEPRLPHIFKTLGMDWEERVLP 399
           +Q P+I DIRT+P + SS +GTKDLQMVN++LR+L +P+  RLP+IF+TLG++++E+VLP
Sbjct: 66  LQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLP 125

Query: 400 SIGNEVVKAVVAQYNAEQLITQRERVSRSVRESLMARAADFGIVLDDVAITHLSFGTEFT 579
           SIGNEV++AVVA +NA+QL+T+R +VS  VR++L+ RA +F I LDD+AITHLS+G EF+
Sbjct: 126 SIGNEVLEAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELDDIAITHLSYGAEFS 185

Query: 580 RAVEAKQVAEQDAERAKFVVMKAEQERNA 666
           RAVEAKQVA+Q+AER+KFVVMKA+QER A
Sbjct: 186 RAVEAKQVAQQEAERSKFVVMKADQERRA 214



EST assemble image


clone accession position
1 LC012e01_r AV619739 1 526
2 LCL086g10_r AV630953 247 666




Chlamydomonas reinhardtii
Kazusa DNA Research Institute