Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002800A_C01 KCC002800A_c01
(412 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T14104 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain ... 33 1.2
ref|XP_311948.1| ENSANGP00000010906 [Anopheles gambiae] gi|30177... 33 1.2
ref|XP_323661.1| predicted protein [Neurospora crassa] gi|289225... 33 1.2
gb|AAC14212.1| ORF4 [Equine arteritis virus] 32 1.6
ref|NP_828246.1| putative ROK-family transcriptional regulator [... 32 2.7
>pir||T14104 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5 - pink salmon
mitochondrion (isolate Tutka Bay Hatchery Nr. 17)
gi|1519255|gb|AAB07459.1| NADH dehydrogenase subunit 5
[Oncorhynchus gorbuscha]
Length = 612
Score = 32.7 bits (73), Expect = 1.2
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 84 PETV*ALCIFLSPYLPSISLFRRIHALPAPHSISAASCSPLTSITHVWGATCMLTPSKV 260
P V AL ++ +P I L R+H L + + +C L ++T ++ ATC LT + +
Sbjct: 246 PTPVSALLHSITMMIPGIFLLIRLHPLMENNQTALTTCLCLGALTTLFTATCALTQNDI 304
>ref|XP_311948.1| ENSANGP00000010906 [Anopheles gambiae] gi|30177322|gb|EAA08127.2|
ENSANGP00000010906 [Anopheles gambiae str. PEST]
Length = 856
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +1
Query: 154 SMRSRLHTQSPPRRARRSHQSLMSGAQHAC*PHRRSSSRVNHGSWVNRS 300
S RSR H PPRR+RR S ++ RR GS V RS
Sbjct: 631 SRRSRSHDDGPPRRSRRDRSESRSRSRSPEQSRRRRRDSTGSGSSVERS 679
>ref|XP_323661.1| predicted protein [Neurospora crassa] gi|28922501|gb|EAA31731.1|
predicted protein [Neurospora crassa]
gi|28950181|emb|CAD71049.1| conserved hypothetical
protein [Neurospora crassa]
Length = 1464
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/60 (31%), Positives = 30/60 (49%)
Frame = -3
Query: 200 RARRGGD*VWSRERMDASEKRYRRQIR*EEDT*GSDSLGKVSQPFEAAPVGQSNMHPVQA 21
RARR + + RER DA E+R +R+ EED G D + + + + G + +A
Sbjct: 563 RARREAEEIMKREREDAKEERRKRKENGEEDPLGWDDSEEDDESYVGSEKGDDDKEEPEA 622
>gb|AAC14212.1| ORF4 [Equine arteritis virus]
Length = 152
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/59 (35%), Positives = 29/59 (48%)
Frame = +2
Query: 107 YLPLTVSAFYIAFPTHPCAPGSTLNLRRVVLAAHINHSCLGRNMHANPIEGHLLGSITV 283
++ +T SAF PT P AP T L +VLAA + H + P H+ G +TV
Sbjct: 53 FINVTHSAFLYLNPTTPTAPAITHCLL-LVLAAKMEHPNATIRLQLQPFGYHVAGDVTV 110
>ref|NP_828246.1| putative ROK-family transcriptional regulator [Streptomyces
avermitilis MA-4680] gi|29610736|dbj|BAC74781.1|
putative ROK-family transcriptional regulator
[Streptomyces avermitilis MA-4680]
Length = 385
Score = 31.6 bits (70), Expect = 2.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 138 SLFRRIHALPAPHSISAASCSPLTSITHVWG 230
SL RRI++ H++ AA C+ LT +T V G
Sbjct: 10 SLLRRINSAVVLHALRAADCATLTEVTRVTG 40
