Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002795A_C01 KCC002795A_c01
(580 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC83295.1| hypothetical protein [Oryza sativa (japonica cul... 45 6e-04
ref|NP_520107.1| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solan... 44 0.002
gb|AAG33966.1|AF229246_1 SCAND2 [Homo sapiens] gi|11345048|gb|AA... 43 0.003
ref|NP_071333.2| SCAN domain-containing protein 2 isoform 1; SCA... 43 0.003
dbj|BAB47431.1| KIAA1802 protein [Homo sapiens] 43 0.004
>dbj|BAC83295.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 173
Score = 45.4 bits (106), Expect = 6e-04
Identities = 47/139 (33%), Positives = 60/139 (42%), Gaps = 10/139 (7%)
Frame = -3
Query: 533 AAPPARCAAS*A--PTAAPSAAGSPR--PRRMSSALTNVARAPCGETSAPCSASCAPFVE 366
AA A CAAS A PTAA R PRR + AL R+P S + + P
Sbjct: 27 AAAAALCAASAARRPTAARRYGRLRRRLPRRAAVALRPPRRSPQPRPSLAAAVAQPP--- 83
Query: 365 RSTAPGTPQPGAETHRPARVLA---CERREPPTGSRKEP*P--WPVLSAPE-TLENEPSI 204
PG PQPGA R + + R PP P P + L P + ++ P +
Sbjct: 84 ----PGPPQPGASARRNRGIRSPWPSPRLRPPRRGLCSPQPPAFARLRLPRRSPQSSPRL 139
Query: 203 SAALRRWAHAPAGRKRPSA 147
S+ R H P+ R RPSA
Sbjct: 140 SSPRRSLRHCPSPRLRPSA 158
>ref|NP_520107.1| PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
gi|17429004|emb|CAD15688.1| PROBABLE TRANSMEMBRANE
PROTEIN [Ralstonia solanacearum]
Length = 962
Score = 43.5 bits (101), Expect = 0.002
Identities = 36/115 (31%), Positives = 49/115 (42%)
Frame = -3
Query: 536 SAAPPARCAAS*APTAAPSAAGSPRPRRMSSALTNVARAPCGETSAPCSASCAPFVERST 357
+AA PA AA TAAP+ + P +SA A+AP S+ +AS A ++
Sbjct: 402 AAAKPAAGAAPSPATAAPAVTAANAPAPSASASATPAQAPAAAASSAETASSATATAGAS 461
Query: 356 APGTPQPGAETHRPARVLACERREPPTGSRKEP*PWPVLSAPETLENEPSISAAL 192
AP P A A E P RK PV+ AP+ E S ++L
Sbjct: 462 APAAATPAA-----ASAPVAEASAPAAAPRKA----PVVVAPQPPAEEESFFSSL 507
>gb|AAG33966.1|AF229246_1 SCAND2 [Homo sapiens] gi|11345048|gb|AAG34567.1|AF244812_1 SCAN
domain-containing protein 2 [Homo sapiens]
Length = 306
Score = 43.1 bits (100), Expect = 0.003
Identities = 40/118 (33%), Positives = 49/118 (40%), Gaps = 6/118 (5%)
Frame = -3
Query: 566 SRQQRTGGLLSAAPPAR--CAAS*APTAAPSAAGSPRPRRMSSALTNVARAPCGETSAPC 393
+R TG S A R CAA+ AP+AA SA S R R +S+ ARAP A
Sbjct: 162 ARASETGSTASCAGRWRTCCAAAAAPSAARSA--SARTGRSTSSCARAARAPSATEGA-- 217
Query: 392 SASCAPFVERSTAPGTP----QPGAETHRPARVLACERREPPTGSRKEP*PWPVLSAP 231
+ R+ AP P +PG RP R P T R+ P P P P
Sbjct: 218 -------LTRTPAPRRPLQRRRPGTGPWRPGRQRGAGTAPPGTQPRQRPSPRPTPRRP 268
>ref|NP_071333.2| SCAN domain-containing protein 2 isoform 1; SCAN domain-containing
2 [Homo sapiens] gi|15991817|ref|NP_378659.1| SCAN
domain-containing protein 2 isoform 1; SCAN
domain-containing 2 [Homo sapiens]
gi|15991819|ref|NP_378660.1| SCAN domain-containing
protein 2 isoform 1; SCAN domain-containing 2 [Homo
sapiens] gi|15991821|ref|NP_378661.1| SCAN
domain-containing protein 2 isoform 1; SCAN
domain-containing 2 [Homo sapiens]
gi|15991823|ref|NP_378662.1| SCAN domain-containing
protein 2 isoform 1; SCAN domain-containing 2 [Homo
sapiens] gi|29839632|sp|Q9GZW5|SDP2_HUMAN SCAN
domain-containing protein 2
Length = 306
Score = 43.1 bits (100), Expect = 0.003
Identities = 40/118 (33%), Positives = 49/118 (40%), Gaps = 6/118 (5%)
Frame = -3
Query: 566 SRQQRTGGLLSAAPPAR--CAAS*APTAAPSAAGSPRPRRMSSALTNVARAPCGETSAPC 393
+R TG S A R CAA+ AP+AA SA S R R +S+ ARAP A
Sbjct: 162 ARASETGSTASCAGRWRTCCAAAAAPSAARSA--SARTGRSTSSCARAARAPSATEGA-- 217
Query: 392 SASCAPFVERSTAPGTP----QPGAETHRPARVLACERREPPTGSRKEP*PWPVLSAP 231
+ R+ AP P +PG RP R P T R+ P P P P
Sbjct: 218 -------LTRTPAPRRPLQRRRPGTGPWRPGRQRGAGTAPPGTQPRQRPSPRPTPRRP 268
>dbj|BAB47431.1| KIAA1802 protein [Homo sapiens]
Length = 821
Score = 42.7 bits (99), Expect = 0.004
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Frame = -3
Query: 530 APPARCAAS*APTAAPSAAGSPRPRRMSSALTNVARAPCGETSAPCSASC--APFVERST 357
+P + A +P + + +P+P++ S ET P SAS +P + S
Sbjct: 213 SPEPQKPAPVSPESVKATLSNPKPQKQSHF---------PETLGPPSASSPESPVLAASP 263
Query: 356 APGTPQPGA--ETHRPARVLACERREPPTGSRKEP*-PWPVLSAPETLENEPSISAALRR 186
P P P A E+ + AR + E R+P EP P+P +S PE P++S
Sbjct: 264 EPWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVS-PEPRRPAPAVSPG--S 320
Query: 185 WAHAPAGRKRP 153
W P G RP
Sbjct: 321 WKPGPPGSPRP 331
