Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002766A_C01 KCC002766A_c01
(528 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00130686.1| COG0797: Lipoproteins [Desulfovibrio desulfur... 36 0.35
ref|ZP_00058150.1| COG4147: Predicted symporter [Thermobifida fu... 35 0.78
sp|P13983|EXTN_TOBAC Extensin precursor (Cell wall hydroxyprolin... 34 1.0
ref|NP_176853.1| C-x8-C-x5-C-x3-H type Zinc finger protein -rela... 34 1.3
ref|NP_056526.1| glioma tumor suppressor candidate region gene 1... 33 1.7
>ref|ZP_00130686.1| COG0797: Lipoproteins [Desulfovibrio desulfuricans G20]
Length = 377
Score = 35.8 bits (81), Expect = 0.35
Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = +3
Query: 168 GARPIVVVPLHAWYGRRKSLQRNASIAKSCAVSQGPLVSYGGPL-TCTACAGIWECMRRG 344
G P VVP R++ QRNA+ + AVSQ GG T AG +
Sbjct: 143 GEAPQAVVPAAI----RRTAQRNATGDEQKAVSQAGTAPAGGQTGTAQPAAGQHDSAETA 198
Query: 345 ACAGLFGVVLCDASCRWRAGVNLGAP*LERPVAGYRGHG-QGGGH 476
A AG + A + RA ++ AP ER H QGG H
Sbjct: 199 AAAGATQAGMTAAVSQGRADSSVAAPIAERDGVASPDHAPQGGSH 243
>ref|ZP_00058150.1| COG4147: Predicted symporter [Thermobifida fusca]
Length = 702
Score = 34.7 bits (78), Expect = 0.78
Identities = 29/84 (34%), Positives = 34/84 (39%), Gaps = 2/84 (2%)
Frame = -3
Query: 514 SSPARTGGLMLPQWPPP*PCPR*PATGLSSYGAPKFTPARQRHDASQRTTPNRPAHAPRR 335
++PAR P+ P P PR G P+ TP R R P RPA PRR
Sbjct: 37 ANPARPPARQSPR-PVAGPPPRRRRRGTCGRPLPRPTPPRTPRPHPGRRHPRRPAPRPRR 95
Query: 334 MHSQIPAHAVQVSGPPY--DTNGP 269
+ S P H V P D GP
Sbjct: 96 LAS--PRHHPSVDHPRVLADAGGP 117
>sp|P13983|EXTN_TOBAC Extensin precursor (Cell wall hydroxyproline-rich glycoprotein)
gi|82169|pir||S06733 hydroxyproline-rich glycoprotein
precursor - common tobacco gi|19867|emb|CAA32090.1|
unnamed protein product [Nicotiana tabacum]
Length = 620
Score = 34.3 bits (77), Expect = 1.0
Identities = 27/82 (32%), Positives = 35/82 (41%), Gaps = 3/82 (3%)
Frame = -3
Query: 523 IAQSSPARTGGLMLP---QWPPP*PCPR*PATGLSSYGAPKFTPARQRHDASQRTTPNRP 353
+A + + GG + P PPP + GLS AP TP + H S R P R
Sbjct: 22 VAAEATTQYGGYLPPPVTSQPPP------SSIGLSPPSAPTTTPPSRGHVPSPRHAPPRH 75
Query: 352 AHAPRRMHSQIPAHAVQVSGPP 287
A+ P H +P V GPP
Sbjct: 76 AYPP-PSHGHLPP---SVGGPP 93
>ref|NP_176853.1| C-x8-C-x5-C-x3-H type Zinc finger protein -related [Arabidopsis
thaliana] gi|12597770|gb|AAG60083.1|AC013288_17
C-x8-C-x5-C-x3-H type Zinc finger protein, putative
[Arabidopsis thaliana]
Length = 310
Score = 33.9 bits (76), Expect = 1.3
Identities = 18/51 (35%), Positives = 24/51 (46%)
Frame = +2
Query: 200 CMVWQEEVASAQCEHCKELCGVSGPVSIIRRPAYLHSVCRYLGMHASGCMC 352
C WQE A ++C+ G+ +IR P Y VCR M +G MC
Sbjct: 238 CNKWQETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCR---MMVTGAMC 285
>ref|NP_056526.1| glioma tumor suppressor candidate region gene 1 [Homo sapiens]
gi|18203330|sp|Q9NZM4|GSR1_HUMAN Glioma tumor suppressor
candidate region gene 1 protein
gi|7453547|gb|AAF62874.1| glioma tumor suppressor
candidate region protein 1 [Homo sapiens]
Length = 1509
Score = 33.5 bits (75), Expect = 1.7
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -3
Query: 520 AQSSPARTGGLMLPQWPP----P*PCPR*PATGLSSYGAPKFTPARQRHDASQRTTPNRP 353
A ++P G + PQ P P P P+ PA P +P+ H A +P+ P
Sbjct: 683 APATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLP-HQAPLGDSPHLP 741
Query: 352 AHAPRRMHSQIPAHAVQVSGPP 287
+ P R S+ P+ VS PP
Sbjct: 742 SPHPTRPPSRPPSRPQSVSRPP 763
