KCC002704A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002704A_C01 KCC002704A_c01
gcgcttctagcgtcacccgtgagccccgggggtaacttatctgtggccgtgaccaagccg
ggctagctagcgctcctgccGCTGTGACTCCTCGCGCTTTGTGACACCATACTGTGACAA
CGAATGACAAGCGCACATCGGAAGCCATCGGTTCCAGGATGGCAATTCCTGGCCATCCTC
AGGATGTTTCTCCTAGCGCTTCTTGAGCTGTTTTGGGGACTGCTCACATGGCCGTTCGTG
CGGCGTCGTGAAATACCGCAACTTCTCTACGTGGATACGGAGCGAAATCGCGAGTTGGTC
GAGCGCACTCGAGGCGTGCTGAAAGGCTATTCGCCAACGCCATGGGCGAGTGGACCTAAC
GCGCAAACCTTTTTCTCAGTAATCCACCTCGGAGCACGACCGGTTCCGCGCAAGGAGCTT
GTGACAATGAGCGATGGAGTCCAAGTCATTCTTCTCTGGTTTGAGGGCCCAGGCATCAAG
CCTGACGCGCCCTGCGTCATCTCGCTGCACGGTATCGGCGGCGATGAGCACAGCGTGCGG
CCAATCATGCTGGCTGAGGAGTGTCTAAAGCGTGGCTGGCGCAGCGTGATGTATGTGCGG
CGCGGCCACGGCGACAGCTCGCTGCTCCCTGTGGGAGCTGTGGCGCCAAGCGGTGGCGGT
GCAGATGAGACTACGAAAGCCGCCGGCAGTGCCGACGGCAACACCTTTCATTCGCCGTTG
TACGCGGGGCCATCCGCCGGCAATGCCGCCGTCACCGACGCTGGCAAGGGCCAGCGCCAA
GGACCGGGGCCGATTGCGGAGGCAACGGAGGCGGACAGCCAGCGCAGGAGCGCCAGCGGC
CACGGCGACGGCTCCGCAGCAGCCATCAGCACACCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002704A_C01 KCC002704A_c01
         (876 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH46710.1| Similar to abhydrolase domain containing 3 [Xenop...    55  2e-06
ref|NP_841338.1| Esterase/lipase/thioesterase family active site...    53  8e-06
ref|ZP_00089942.1| COG0429: Predicted hydrolase of the alpha/bet...    52  1e-05
ref|NP_507863.1| putative endoplasmic reticulum protein of ancie...    52  1e-05
ref|XP_308926.1| ENSANGP00000013379 [Anopheles gambiae] gi|21292...    50  4e-05

>gb|AAH46710.1| Similar to abhydrolase domain containing 3 [Xenopus laevis]
          Length = 411

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
 Frame = +1

Query: 316 VLKGYSPTPWASGPNAQTFFSVIHLGARPVP-RKELVTMSDGVQVILLW--------FEG 468
           V + + PT W  G   QT   VI L   PV  RKE++  +DG Q+ L W        F G
Sbjct: 57  VKEKFRPTMWCFGGRIQTILRVILLSKPPVSYRKEILKTTDGGQISLDWVDNNESSQFPG 116

Query: 469 PGIKPDAPCVISLHGIGGDEHSVRPIMLAEECLKRGWRSVMYVRRGHGDSSLL 627
             ++   P VI L G+ G+      + L  +  + G+RSV++  RG G   LL
Sbjct: 117 ASLR---PTVIFLPGLTGNSRQSYILHLVHQASRDGYRSVVFNNRGFGGEELL 166

>ref|NP_841338.1| Esterase/lipase/thioesterase family active site [Nitrosomonas
           europaea ATCC 19718] gi|30180587|emb|CAD85200.1|
           Esterase/lipase/thioesterase family active site
           [Nitrosomonas europaea ATCC 19718]
          Length = 341

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 52/177 (29%), Positives = 75/177 (41%), Gaps = 9/177 (5%)
 Frame = +1

Query: 313 GVLKGYSPTPWASGPNAQTFFSV-IHLGARPVPRKELVTMSDGVQVILLWFEGPGIKPDA 489
           G+L+ Y    W  G NAQT F   I+L      R+E   M DG  + + W +G   + D 
Sbjct: 11  GLLESYRAPKWLPGGNAQTIFPYFINLSPIISYRRERWEMDDGDFIDIDWLDG---ESDK 67

Query: 490 PCVISLHGIGGDEHSVRPIMLAEECLKRGWR-SVMYVRRGHGDSSLLPVGAVAPSGGGAD 666
           P VI LHG+ G   S   + L        WR +V++ R   G S+ LP    A      D
Sbjct: 68  PLVIMLHGLEGSSQSHYALSLMNLLQMLRWRGAVVHFRGCSGYSNRLPRAYHAGDSMEID 127

Query: 667 ETTK-AAGSADGNTFHSPLY-AGPSAGNAAV-----TDAGKGQRQGPGPIAEATEAD 816
              +  A   D + +++P Y  G S G  A+         +  RQ  G +A +   D
Sbjct: 128 RMLRHIAHRNDSHEWNTPCYVVGVSLGGNALLKWLGEQGAQAARQIAGVVAVSVPLD 184

>ref|ZP_00089942.1| COG0429: Predicted hydrolase of the alpha/beta-hydrolase fold
           [Azotobacter vinelandii]
          Length = 430

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
 Frame = +1

Query: 328 YSPTPWASGPNAQTFFSVIHLGARPVP---RKELVTMSDGVQVILLWFEGPGIKPDAPCV 498
           + P  W  GP+ QT +    L  RP P   R+E + ++DG  + L W  GP   P  P V
Sbjct: 107 FRPAWWLPGPHLQTLWGP--LCRRPPPLERRRERLWLADGDFLDLDW-HGPD-DPRMPLV 162

Query: 499 ISLHGIGGDEHSVRPIMLAEECLKRGWRSVMYVRRG-HGDSSLLPVGAVAPSGGGADETT 675
           + LHG+ G   S+  + L +    RGW SV    RG  G+ + LP    A   G +D+  
Sbjct: 163 LVLHGLTGSSRSLYVLGLQQALAARGWASVALNWRGCSGEPNRLP---RAYHSGASDDLA 219

Query: 676 KAAGSADGNTFHSPLYA 726
                      H+PL+A
Sbjct: 220 ATIDHLRRRRPHAPLHA 236

>ref|NP_507863.1| putative endoplasmic reticulum protein of ancient origin (42.1 kD)
           (5U427) [Caenorhabditis elegans]
           gi|6425362|emb|CAB60395.1| Hypothetical protein Y60A3A.7
           [Caenorhabditis elegans]
          Length = 375

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
 Frame = +1

Query: 265 LYVDTERNRELVERTRGVLKGYSPTPWASGPNAQTFFSVIHLGARPVP-RKELVTMSDGV 441
           LY   + N  ++E+       Y P+ W      QT    +      +P ++E+V  SDG 
Sbjct: 38  LYEKVKANLRILEQK------YHPSWWCPFGTTQTIVRQVFRDCPTLPFKREIVEFSDGG 91

Query: 442 QVILLWFEGPGIKPDAPCVISLHGIGGDEHS----VRPIMLAEECLKRGWRSVMYVRRGH 609
              + W    G   DAP V+ L GI G  H     + P+M A +   +GWRSV+  +RG 
Sbjct: 92  AAGIDWLIPEGADDDAPIVVFLPGITGSTHDCSYVLHPVMEARD---KGWRSVVVNQRGL 148

Query: 610 GDSSL 624
           G   L
Sbjct: 149 GGVKL 153

>ref|XP_308926.1| ENSANGP00000013379 [Anopheles gambiae] gi|21292084|gb|EAA04229.1|
           ENSANGP00000013379 [Anopheles gambiae str. PEST]
          Length = 432

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
 Frame = +1

Query: 334 PTPWASGPNAQTFF-SVIHLGARPVP--RKELVTMSDGVQVILLWFEGPGIKPDAPCVIS 504
           PT W     AQT F S+I     P+   R+E+ T+ DG +V L W E  G  P++P +I 
Sbjct: 63  PTFWCVESRAQTVFASIIRSNIMPLVEYRREVFTLKDGGEVALDWLE-TGCDPESPVIII 121

Query: 505 LHGIGGDEHSVRPIMLAEECLKRGWRSVMYVRRGHGDSSL 624
           L G+ G+  +     L     + G R+V++  RG G  +L
Sbjct: 122 LPGLTGESQAEYIKCLVTAANRIGIRTVVFTNRGLGGVAL 161



EST assemble image


clone accession position
1 MXL019c10_r BP094186 1 494
2 LCL020a02_r AV627024 262 662
3 HCL093f11_r AV644782 447 876




Chlamydomonas reinhardtii
Kazusa DNA Research Institute