Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002694A_C01 KCC002694A_c01
(526 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 42 0.004
gb|AAP79264.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 42 0.005
ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium vi... 42 0.006
pir||C34768 ORF2 protein - Orf virus (strain NZ2) gi|332565|gb|A... 40 0.014
ref|NP_642475.1| histidine kinase-response regulator hybrid prot... 40 0.014
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 42.4 bits (98), Expect = 0.004
Identities = 27/70 (38%), Positives = 35/70 (49%), Gaps = 6/70 (8%)
Frame = +2
Query: 308 PLTTASRPTAACVMPMPRGSVW----TRSTPCPAKPSASPRTWSPATRRARPAVTPRRST 475
P + + PTA P W T S CPA PSA+ RT + A+R A PA TP S+
Sbjct: 405 PAASPAGPTACRSTPSATTRAWPASATTSPSCPASPSAARRTTASASRPASPARTPPWSS 464
Query: 476 F--TSSSWMS 499
+ T+ W S
Sbjct: 465 WAATARGWTS 474
Score = 31.2 bits (69), Expect = 8.4
Identities = 37/114 (32%), Positives = 46/114 (39%), Gaps = 10/114 (8%)
Frame = +2
Query: 209 RTPT-WGDAQQRCCWRSCALAWRRPLLIVTSCNLPLTTASRPTAACVMPM--PRGSVWTR 379
RTPT W CC R RR T+ P + SR T P PR S
Sbjct: 358 RTPTCW------CCARRSGGTARRRSSAGTT---PASWTSRATTCARRPAWPPRRSPAAS 408
Query: 380 S---TPCPAKPSASPRTWSPATRRARPAV----TPRRSTFTSSSWMSSPPATAP 520
T C + PSA+ R W PA+ P+ + R T S+S +SP T P
Sbjct: 409 PAGPTACRSTPSATTRAW-PASATTSPSCPASPSAARRTTASASRPASPARTPP 461
>gb|AAP79264.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[uncultured bacterium]
Length = 157
Score = 42.0 bits (97), Expect = 0.005
Identities = 41/119 (34%), Positives = 49/119 (40%), Gaps = 16/119 (13%)
Frame = +2
Query: 215 PTWGDAQQRCCWRSC---ALAWRRPLLIVTSCN--LPLTTASRPTAACVMPMPRGSVWTR 379
P W + C RSC A A + C LP A+ C P R SV TR
Sbjct: 37 PPWASSTS-CASRSCRKTAAAATSSIRTGDRCPVCLPWPPAASTCGTCP-PWWRSSVTTR 94
Query: 380 STPCPAKPSASPRT-----------WSPATRRARPAVTPRRSTFTSSSWMSSPPATAPS 523
P+A+P W PA+R A PAV R + TSS W PP+TAPS
Sbjct: 95 CCSSVVAPTATPGVRPPAPPPTVWPWKPASRPATPAVRSRGNRATSS-W--KPPSTAPS 150
>ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium violaceum ATCC 12472]
gi|34103761|gb|AAQ60122.1| hypothetical protein CV2451
[Chromobacterium violaceum ATCC 12472]
Length = 247
Score = 41.6 bits (96), Expect = 0.006
Identities = 38/102 (37%), Positives = 43/102 (41%), Gaps = 2/102 (1%)
Frame = -1
Query: 520 WRGCRW-GRHPARACKSRPSWRHSRASPSCCRGPRAR*SRWFGRTRCRAG-PNGTARHRH 347
WR CR GR C+ RPS + S CR R+R RW R R RAG R R
Sbjct: 59 WRWCRLPGRRIRSICRRRPSQPPGPRNRSPCRTARSR--RW--RCRRRAGAARALPRRRS 114
Query: 346 HARSRRAGSGCQREIAGGHDQQRSTPRQRTRAPAAALLRVAP 221
A SR A GC S R+R+R AA R P
Sbjct: 115 GAGSRPAAPGCWPR------TDCSRARRRSRRSAAGCRRARP 150
>pir||C34768 ORF2 protein - Orf virus (strain NZ2) gi|332565|gb|AAA46789.1| ORF2
Length = 221
Score = 40.4 bits (93), Expect = 0.014
Identities = 39/112 (34%), Positives = 45/112 (39%), Gaps = 2/112 (1%)
Frame = -1
Query: 514 GCRWGRHPARACKSRPSWRHSRASPSCCR--GPRAR*SRWFGRTRCRAGPNGTARHRHHA 341
GCRW R AR C + W +R C R GPR R R A G R A
Sbjct: 47 GCRWRRCCARRCAAAARW--TRGCRCCWRGAGPRPR--------RAPAAARGARRRGCCA 96
Query: 340 RSRRAGSGCQREIAGGHDQQRSTPRQRTRAPAAALLRVAPCWGPHLAQRCDK 185
R R G G R ++ S P RAPAAAL AP P + D+
Sbjct: 97 RRARGGGGWPRRWRPRAARRGSGP--PARAPAAAL---APDQAPRSKVKKDR 143
>ref|NP_642475.1| histidine kinase-response regulator hybrid protein [Xanthomonas
axonopodis pv. citri str. 306]
gi|21108388|gb|AAM37011.1| histidine kinase-response
regulator hybrid protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 509
Score = 40.4 bits (93), Expect = 0.014
Identities = 49/151 (32%), Positives = 55/151 (35%), Gaps = 31/151 (20%)
Frame = -1
Query: 508 RWGRHPARACKSRPSWRHSRASPSC---CRGPRAR*S--RWFGRTRCRAGPNGTA----- 359
R R R RP WR R SC C G R R R GRT A P+
Sbjct: 336 RGARERGRCAAVRPRWRRDRLPASCRCRCAGDRRRECGIRCGGRTGRLADPSQPLPRHHL 395
Query: 358 RHRHHARSRRA--GSGC-QREIAG---GHDQQRSTPR----QRTRAPAAALLRVAPCWGP 209
RHR HAR RRA G C QR AG G +R R + TR A P
Sbjct: 396 RHRAHARPRRAELGRACGQRHDAGYLHGPAPRRCAGRCIAGRHTRRHRAGRHAAGAATSP 455
Query: 208 HLAQRCDKNN-----------LGTRCYVECC 149
H R ++ G RC+V C
Sbjct: 456 HRPGRPWDDSRRAATGSAHLVAGGRCFVRSC 486
