Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002693A_C01 KCC002693A_c01
(515 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC83807.1| putative thioredoxin [Oryza sativa (japonica cul... 49 4e-05
ref|NP_180885.1| thioredoxin family [Arabidopsis thaliana] gi|25... 46 2e-04
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 44 0.001
gb|AAH36187.1| SRRM1 protein [Homo sapiens] 43 0.003
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 43 0.003
>dbj|BAC83807.1| putative thioredoxin [Oryza sativa (japonica cultivar-group)]
Length = 279
Score = 48.9 bits (115), Expect = 4e-05
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 276 EAEARRMARAREMAEGHMLDAMG--VKWYEGSLPPNMVVVRTPACVDLLTQRAAAEGRTV 449
E +AR + R E A G M +G ++W+E L PNM + + DL A + V
Sbjct: 59 ERKARPLPRNLEAAHGQMNLTIGKAMRWWEKCLQPNMREIESAQ--DLADSLLNAGDKLV 116
Query: 450 LLNFFQDDCYACRTLHPKLKKL 515
+++FF C CR LHPK+ +L
Sbjct: 117 VVDFFSPGCGGCRALHPKIAQL 138
>ref|NP_180885.1| thioredoxin family [Arabidopsis thaliana] gi|25408254|pir||D84743
probable thioredoxin [imported] - Arabidopsis thaliana
gi|2459410|gb|AAB80645.1| putative thioredoxin
[Arabidopsis thaliana]
Length = 273
Score = 46.2 bits (108), Expect = 2e-04
Identities = 22/56 (39%), Positives = 32/56 (56%)
Frame = +3
Query: 348 KWYEGSLPPNMVVVRTPACVDLLTQRAAAEGRTVLLNFFQDDCYACRTLHPKLKKL 515
KW+E L PNM V +P DL+ A + V+++FF C C+ LHPK+ K+
Sbjct: 85 KWWEKELKPNMKSVTSPQ--DLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKI 138
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive
matrix protein 1 [Rattus norvegicus]
Length = 958
Score = 43.9 bits (102), Expect = 0.001
Identities = 26/70 (37%), Positives = 31/70 (44%)
Frame = -3
Query: 483 RRSSRPGRS*AARCGPRRRRAA*AGPRMRACALPPCWAAGSPRTILLPLHPAYGPQPSPA 304
RRS P PRRRR+ PR R + PP + SPR P+ Y P P P
Sbjct: 606 RRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK 665
Query: 303 PLPCALPPPP 274
+ PPPP
Sbjct: 666 RRTASPPPPP 675
>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
Length = 904
Score = 42.7 bits (99), Expect = 0.003
Identities = 25/67 (37%), Positives = 31/67 (45%)
Frame = -3
Query: 474 SRPGRS*AARCGPRRRRAA*AGPRMRACALPPCWAAGSPRTILLPLHPAYGPQPSPAPLP 295
+R RS + PRRRR PR R + PP + SPR P+ Y P P P
Sbjct: 555 TRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRT 614
Query: 294 CALPPPP 274
+ PPPP
Sbjct: 615 ASPPPPP 621
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 42.7 bits (99), Expect = 0.003
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = -3
Query: 438 PRRRRAA*AGPRMRACALPPCWAAGSPRTILLPLHPAYGPQPSPAPLPCALPPPP 274
PRRRR+ PR R + PP + SPR P+ Y P P P + PPPP
Sbjct: 586 PRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 640
