Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002685A_C01 KCC002685A_c01
(649 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE04676.1| OSJNBb0018A10.5 [Oryza sativa (japonica cultivar... 52 6e-06
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 49 5e-05
gb|AAM08511.1|AC068654_13 Hypothetical protein [Oryza sativa] gi... 48 1e-04
emb|CAE04658.1| OSJNBa0061G20.14 [Oryza sativa (japonica cultiva... 48 1e-04
gb|AAM08514.1|AC068654_16 Hypothetical protein [Oryza sativa] gi... 47 2e-04
>emb|CAE04676.1| OSJNBb0018A10.5 [Oryza sativa (japonica cultivar-group)]
Length = 909
Score = 52.4 bits (124), Expect = 6e-06
Identities = 30/76 (39%), Positives = 38/76 (49%), Gaps = 5/76 (6%)
Frame = -1
Query: 628 SHPAPPRGCPLP-----PP*PPRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAPAQRWWR 464
S PAPP P+P PP PP PA PAP P P+ +PP P C PAP +
Sbjct: 451 SPPAPPPPPPVPSPSGPPPPPPPPAPSPPAPPPPPPAPSPPAPPPPPPPCPPAPP----K 506
Query: 463 CRARRSPRTAGSAAAR 416
R+R +P A + A +
Sbjct: 507 TRSRHAPPPASTRATK 522
Score = 35.4 bits (80), Expect = 0.73
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 622 PAPPRGCPLPPP*PPRPARGRPAPDPAAPSAAPPGPS 512
P+PP P P PP P P P P+ P PP P+
Sbjct: 439 PSPPAPPSPPAPSPPAPPPPPPVPSPSGPPPPPPPPA 475
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 49.3 bits (116), Expect = 5e-05
Identities = 36/101 (35%), Positives = 41/101 (39%), Gaps = 3/101 (2%)
Frame = -1
Query: 622 PAPPRGCPLPPP*PPR---PARGRPAPDPAAPSAAPPGPSG*SRTCRPAPAQRWWRCRAR 452
PAPP+ P PP PP P P P PA P AAPP P PAPA + R
Sbjct: 64 PAPPKAAPSAPPPPPAAAPPHVAPPPPPPAPPRAAPPPP---PPAAAPAPAPK--RAEPP 118
Query: 451 RSPRTAGSAAARGPAHCASTGTASALHHGWPVAPHAQRAVA 329
P + SA P H A + P A A+R A
Sbjct: 119 PPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERPAA 159
Score = 39.3 bits (90), Expect = 0.051
Identities = 22/54 (40%), Positives = 24/54 (43%), Gaps = 6/54 (11%)
Frame = -1
Query: 622 PAPPRGCPLPPP*P------PRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAPA 479
PAP R P PPP P P P P P PA +APP + R P PA
Sbjct: 110 PAPKRAEPPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERPAAPPPA 163
Score = 37.0 bits (84), Expect = 0.25
Identities = 28/72 (38%), Positives = 32/72 (43%)
Frame = -1
Query: 622 PAPPRGCPLPPP*PPRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAPAQRWWRCRARRSP 443
P+ + PPP PRPA PAP AAPSA PP P+ P P R +P
Sbjct: 47 PSEEKAKEAPPP-GPRPA---PAPPKAAPSAPPPPPAAAPPHVAPPPPP---PAPPRAAP 99
Query: 442 RTAGSAAARGPA 407
AAA PA
Sbjct: 100 PPPPPAAAPAPA 111
Score = 36.6 bits (83), Expect = 0.33
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -1
Query: 625 HPAPPRGCPLPPP*PPRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAP 482
H APP P PP P P AP PA A PP P S + P P
Sbjct: 84 HVAPPPPPPAPPRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPP 131
Score = 36.2 bits (82), Expect = 0.43
Identities = 35/98 (35%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Frame = -1
Query: 619 APPRGCPLPPP*PPRPARGRPAPDP-AAPSAAPPGPSG*SRTCRPAPAQRWWRCRARRSP 443
AP RG P PP P P P P AAP AAP P+ S PA A
Sbjct: 241 APRRGPPPPPAAANPPPAAAPTPAPSAAPQAAPTSPANPS---GPAVAP----------- 286
Query: 442 RTAGSAAARGPAHCASTGTASALHHGWPVAPHAQRAVA 329
A + RGP A G P AP A AVA
Sbjct: 287 -VARPSGERGPQPGAPAGGPPPRPQAGPGAPGAGPAVA 323
Score = 35.4 bits (80), Expect = 0.73
Identities = 28/82 (34%), Positives = 32/82 (38%)
Frame = -1
Query: 628 SHPAPPRGCPLPPP*PPRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAPAQRWWRCRARR 449
SH APP P P PP PA AP AAP+ P P + RP PA RR
Sbjct: 124 SHSAPPPPPPHAAP-PPPPAPKPSAPPTAAPAERPAAPPPAAAPVRP-PAPPAGEAPQRR 181
Query: 448 SPRTAGSAAARGPAHCASTGTA 383
P P + A+ A
Sbjct: 182 GPPPGAVPPNAVPPNAAAPDAA 203
Score = 35.0 bits (79), Expect = 0.95
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -1
Query: 622 PAPPRGCPL--PPP*PPRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAPA 479
P P P PPP P+P +P PA P+ APP P + T PA
Sbjct: 313 PGAPGAGPAVAPPPGQPQPVPPQPGQPPAGPAVAPPAPPPPAVTAPIPPA 362
Score = 32.7 bits (73), Expect = 4.7
Identities = 18/43 (41%), Positives = 19/43 (43%), Gaps = 9/43 (20%)
Frame = -1
Query: 616 PPRGCPLPPP*PPRPARGRPAP---------DPAAPSAAPPGP 515
PP G + PP PP PA P P P AP A PGP
Sbjct: 339 PPAGPAVAPPAPPPPAVTAPIPPAPPPPQALTPIAPGAQAPGP 381
>gb|AAM08511.1|AC068654_13 Hypothetical protein [Oryza sativa] gi|31429821|gb|AAP51816.1|
hypothetical protein [Oryza sativa (japonica
cultivar-group)]
Length = 797
Score = 48.1 bits (113), Expect = 1e-04
Identities = 29/71 (40%), Positives = 38/71 (52%), Gaps = 2/71 (2%)
Frame = -1
Query: 622 PAPPRGCP-LPPP*PPRPARGRPAPDPAAPS-AAPPGPSG*SRTCRPAPAQRWWRCRARR 449
P+PP P +PPP PP P+ P P P APS APP P C PAP + R+R+
Sbjct: 381 PSPPAPSPPVPPPCPPTPSPLAPPPPPHAPSPPAPPPPPPPPPPCPPAPP----KTRSRQ 436
Query: 448 SPRTAGSAAAR 416
+P A + A +
Sbjct: 437 APPPASTRATK 447
>emb|CAE04658.1| OSJNBa0061G20.14 [Oryza sativa (japonica cultivar-group)]
Length = 540
Score = 47.8 bits (112), Expect = 1e-04
Identities = 30/78 (38%), Positives = 40/78 (50%), Gaps = 5/78 (6%)
Frame = -1
Query: 634 LVSHPAPPRGC-PLPPP*PPRPARGRPAPDPAAPS----AAPPGPSG*SRTCRPAPAQRW 470
L + P+PP P+PPP PP P+ P P P APS APP P C PAP
Sbjct: 149 LPAPPSPPAPSPPVPPPRPPAPSPPAPPPPPPAPSPPAPPAPPPPPPPPPPCPPAPP--- 205
Query: 469 WRCRARRSPRTAGSAAAR 416
+ R+R++P A + A +
Sbjct: 206 -KTRSRQAPPLARTRATK 222
>gb|AAM08514.1|AC068654_16 Hypothetical protein [Oryza sativa] gi|31429824|gb|AAP51819.1|
hypothetical protein [Oryza sativa (japonica
cultivar-group)]
Length = 773
Score = 47.0 bits (110), Expect = 2e-04
Identities = 28/71 (39%), Positives = 34/71 (47%)
Frame = -1
Query: 628 SHPAPPRGCPLPPP*PPRPARGRPAPDPAAPSAAPPGPSG*SRTCRPAPAQRWWRCRARR 449
S PAPP P P P P P PAP P AP PP P C PAP + R+R+
Sbjct: 426 SPPAPPPPPPAPSPPAPPPPPPPPAPSPPAPPPPPPPPP----PCPPAPP----KTRSRQ 477
Query: 448 SPRTAGSAAAR 416
+P A + A +
Sbjct: 478 APPPASTRATK 488
