KCC002684A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002684A_C01 KCC002684A_c01
agtcgcaatctttgcctgcaaacaaatcatcgctaccttagaaaGCCAGCACGAACCAAG
ACACACATAGCGCGCTTGTTGCAAAGCCACCGACATGGCTCTGGCCCAGCGCCAAGTTTC
CTGCCGCATTGAGCGGTCTACAGGAGCATCGACATCGCAGCCTGTTGGGTCATGCCTACT
TGTGCAGCGGCGGCCGGGCCAGCGGCGAGGCGTGCCGGCGCGAGCGACACCCGAGTTCAT
CGATGCGCTCAGCGCCCTGGTGCCAAACCTCCCGCTGGAGCAGATTGCAGCACCGTGTCA
AGTCATGAAGTGCGGTGACATCGTCTACCGCAGTACGCTGGATCCGTCCCTCTACAACGA
GGCCGGCTTTGACGAGAAGACTGTCGCGCTGTTGGCCCCCGTGCTTGCGTATCTCTTCCT
CCCACCGGGCGTGCTACCAGGCGCCATCGACTATTACATTCGCGCGCCCCTCAAGCGCAA
GCAGACCAAGGCCATTGACAAAAATGACATTGTCCTGGGCAAGCGCTTGGCGCACGGGCT
GGCTTCGGCACCGTGTTCAAGGGGGAGCTCAAGGAGGAGGGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002684A_C01 KCC002684A_c01
         (583 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO63768.1| protein kinase [Chlamydomonas reinhardtii]             290  2e-81
ref|NP_564946.1| protein kinase family [Arabidopsis thaliana] gi...    67  2e-10
ref|NP_068239.1| PxORF20 peptide [Plutella xylostella granulovir...    39  0.040
ref|NP_060806.1| hypothetical protein FLJ11136 [Homo sapiens] gi...    39  0.069
emb|CAC83675.1| mucin 5 [Homo sapiens]                                 38  0.12

>gb|AAO63768.1| protein kinase [Chlamydomonas reinhardtii]
          Length = 754

 Score =  290 bits (742), Expect(2) = 2e-81
 Identities = 146/148 (98%), Positives = 146/148 (98%)
 Frame = +2

Query: 95  MALAQRQVSCRIERSTGASTSQPVGSCLLVQRRPGQRRGVPARATPEFIDALSALVPNLP 274
           MALAQRQVSCRIERSTGASTSQPVGSCLLVQRRPGQRRGVPARATPEFIDALSALVPNLP
Sbjct: 1   MALAQRQVSCRIERSTGASTSQPVGSCLLVQRRPGQRRGVPARATPEFIDALSALVPNLP 60

Query: 275 LEQIAAPCQVMKCGDIVYRSTLDPSLYNEAGFDEKTVALLAPVLAYLFLPPGVLPGAIDY 454
           LEQIAAPCQVMKCGDIVYRSTLDPSLYNEAGFDEKTVALLAPVLAYLFLPPGVLPGAIDY
Sbjct: 61  LEQIAAPCQVMKCGDIVYRSTLDPSLYNEAGFDEKTVALLAPVLAYLFLPPGVLPGAIDY 120

Query: 455 YIRAPLKRKQTKAIDKNDIVLGKRLAHG 538
           YIRAPLKRKQTKAIDKNDIVLGKRL  G
Sbjct: 121 YIRAPLKRKQTKAIDKNDIVLGKRLGTG 148

 Score = 34.7 bits (78), Expect(2) = 2e-81
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 517 GQALGARAGFGTVFKGELKEEG 582
           G+ LG   GFGTVFKGELKEEG
Sbjct: 142 GKRLGT-GGFGTVFKGELKEEG 162

>ref|NP_564946.1| protein kinase family [Arabidopsis thaliana]
           gi|25404782|pir||A96713 hypothetical protein T6L1.2
           [imported] - Arabidopsis thaliana
           gi|12323224|gb|AAG51596.1|AC011665_17 putative protein
           kinase; tRNA-Met; tRNA-Phe; tRNA-Ile [Arabidopsis
           thaliana] gi|12324136|gb|AAG52037.1|AC011914_7 putative
           protein kinase; 22015-24834 [Arabidopsis thaliana]
          Length = 562

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 37/100 (37%), Positives = 53/100 (53%)
 Frame = +2

Query: 284 IAAPCQVMKCGDIVYRSTLDPSLYNEAGFDEKTVALLAPVLAYLFLPPGVLPGAIDYYIR 463
           +  PC VM+CGD++YRSTL  S  N        VAL    L+YL+  PGV PG  D ++ 
Sbjct: 61  VGLPCTVMECGDMIYRSTLPKS--NGLTITAPGVALALTALSYLWATPGVAPGFFDMFVL 118

Query: 464 APLKRKQTKAIDKNDIVLGKRLAHGLASAPCSRGSSRRRA 583
           A ++R       K+D V+GK+L  G          S++R+
Sbjct: 119 AFVERLFRPTFRKDDFVVGKKLGEGSFGVVYKVSLSKKRS 158

>ref|NP_068239.1| PxORF20 peptide [Plutella xylostella granulovirus]
           gi|11036815|gb|AAG27318.1|AF270937_20 PxORF20 peptide
           [Plutella xylostella granulovirus]
          Length = 235

 Score = 39.3 bits (90), Expect = 0.040
 Identities = 29/85 (34%), Positives = 35/85 (41%)
 Frame = +3

Query: 237 SSMRSAPWCQTSRWSRLQHRVKS*SAVTSSTAVRWIRPSTTRPALTRRLSRCWPPCLRIS 416
           S +RS P CQ + W  L+  + S     SS AVR +  + T P   RR S    P  R  
Sbjct: 44  SGIRSLPKCQKALWKELEPEINSEKLFISSLAVRMLIANLTSPHRRRRRSAPRCPSPRRC 103

Query: 417 SSHRACYQAPSTITFARPSSASRPR 491
            S R C   PS      P     PR
Sbjct: 104 PSPRRC---PSPRRCPSPRRCPSPR 125

>ref|NP_060806.1| hypothetical protein FLJ11136 [Homo sapiens]
           gi|7023614|dbj|BAA92027.1| unnamed protein product [Homo
           sapiens]
          Length = 166

 Score = 38.5 bits (88), Expect = 0.069
 Identities = 42/140 (30%), Positives = 52/140 (37%), Gaps = 9/140 (6%)
 Frame = +1

Query: 187 AAAGPAARRAGASDTRVHRCAQRPGAKPPAGADCSTVSSHEVR*HRLPQYAGSVPLQRGR 366
           A  GPA R  G    R    A  PGA     AD           HR+ +    + L  GR
Sbjct: 3   ARQGPALRGGGPRGRRGAASAAAPGALVAVRADYGACRQLRHLPHRV-RGCRRLLLVPGR 61

Query: 367 L*REDCRAVGPRAC--------VSLP-PTGRATRRHRLLHSRAPQAQADQGH*QK*HCPG 519
                CR  G +AC        V LP   G+  R+ R+L  RAP  Q +           
Sbjct: 62  PRSRGCRLAGAKACGQAVTEEGVELPVDVGQGHRKRRVLRPRAPWRQRE----------- 110

Query: 520 QALGARAGFGTVFKGELKEE 579
              G +AGF T   G L +E
Sbjct: 111 --AGPKAGFCTAPGGRLLKE 128

>emb|CAC83675.1| mucin 5 [Homo sapiens]
          Length = 1349

 Score = 37.7 bits (86), Expect = 0.12
 Identities = 31/103 (30%), Positives = 49/103 (47%)
 Frame = +3

Query: 231  PSSSMRSAPWCQTSRWSRLQHRVKS*SAVTSSTAVRWIRPSTTRPALTRRLSRCWPPCLR 410
            P++S  SAP   TS  S   HR  S    TS+T    + P+T+  +     +   P    
Sbjct: 1101 PTTSTTSAP--TTSTTSAPTHRTTS-GPTTSTT----LAPTTSTTSAPTTSTNSAPTTST 1153

Query: 411  ISSSHRACYQAPSTITFARPSSASRPRPLTKMTLSWASAWRTG 539
            IS+S  +   AP+T T + P+S++   P T  T +  S+  +G
Sbjct: 1154 ISASTTSTISAPTTSTISSPTSSTTSTPQTSKTSAATSSTTSG 1196



EST assemble image


clone accession position
1 HCL086h07_r AV644353 1 504
2 HCL088b08_r AV644419 45 507
3 MXL039b01_r BP095265 261 583




Chlamydomonas reinhardtii
Kazusa DNA Research Institute