KCC002682A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002682A_C01 KCC002682A_c01
CAGGGGTCGGTGAAATTACAATGCCGCCCTTCAATGGTCGGGCTAATTCTTATCCGGGTG
GCTATCATACACAGAAATCGTTCTCTCAATCCAAGGAGTTCACAACCAATCAGACTAAAA
CATTCCGAGTCCAGGGGGCTGGTCGCGCCTCGCACGCAAAGACGCCCTCCACCGCAAGAA
TTAGCATCGCTCTCTCAAAGCATGTAAACACTCGAAAGTCGACAACGAAACCCACACACG
TACACATGCGGCACATACACACACACACACACACACACACACAGCTTCGCGCGTAGGCTC
CCACAGACGTGCAGACACCGCCCAGCGCCGCGCCCTCGCCCCACCCAGTTCGTATGGTCC
GGGAGTGCCAGCGAGTGCACGCAGGAGCGCGCCGGGCCAGGGAAAACGCAGTCCGCATCG
TAGCCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002682A_C01 KCC002682A_c01
         (426 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_042981.1| Hypothetical protein [Human herpesvirus 6] gi|8...    39  1e-04
ref|XP_316923.1| ENSANGP00000023986 [Anopheles gambiae] gi|30175...    44  7e-04
dbj|BAC31276.1| unnamed protein product [Mus musculus]                 42  0.002
dbj|BAC35524.1| unnamed protein product [Mus musculus]                 42  0.002
ref|XP_310629.1| ENSANGP00000023115 [Anopheles gambiae] gi|30177...    42  0.003

>ref|NP_042981.1| Hypothetical protein [Human herpesvirus 6]
           gi|854065|emb|CAA58337.1| U88 [Human herpesvirus 6]
          Length = 413

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMC-RMCTCVGFVVDFRVFTC 200
           VC  V      CVCVCVCVC+C  +C CV   V   V  C
Sbjct: 237 VCVCVCVCVCVCVCVCVCVCLCVCVCLCVCLCVCLCVCVC 276

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMC-RMCTCVGFVVDFRVFTC 200
           VC  V      CVCVCVCVC+C  +C CV   V   V  C
Sbjct: 233 VCVCVCVCVCVCVCVCVCVCVCVCLCVCVCLCVCLCVCLC 272

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVCVCVCVC+C +C CV   V   V  C
Sbjct: 261 VCLCVCLCVCLCVCVCVCVCLC-VCLCVCLCVCVCVCVC 298

 Score = 38.9 bits (89), Expect = 0.017
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTCFERAMLILAVEGVFAC 152
           VC      AR CVC CVCVC C +C C    V   +  C    + + A   V AC
Sbjct: 105 VCVCARVCARVCVCACVCVCAC-LCVCACLCVCACLCVC--ACLCVCACLCVCAC 156

 Score = 38.5 bits (88), Expect = 0.022
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVCVCVCVC+C +C CV   V   +  C
Sbjct: 229 VCLCVCVCVCVCVCVCVCVCVC-VCVCVCLCVCVCLCVC 266

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMC-RMCTCVGFVVDFRVFTC 200
           VC  V      CVCVCVCVC+C  +C CV   V   V  C
Sbjct: 223 VCLCVCVCLCVCVCVCVCVCVCVCVCVCVCVCVCLCVCVC 262

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  +      CVCVCVCVC+C +C CV   V   V  C
Sbjct: 221 VCVCLCVCVCLCVCVCVCVCVC-VCVCVCVCVCVCVCLC 258

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVC+CVCVC+C +C CV   V   V  C
Sbjct: 217 VCLCVCVCLCVCVCLCVCVCVC-VCVCVCVCVCVCVCVC 254

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 18/49 (36%), Positives = 26/49 (52%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTCFERAMLILAV 170
           +C  V      CVC+CVCVC+C +C CV   V   V  C    +L +++
Sbjct: 257 LCVCVCLCVCLCVCLCVCVCVC-VCLCVCLCVCLCVCVCVCVCLLCMSL 304

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           VC  +   A  CVCVCVC+C+C +C CV
Sbjct: 159 VCACLCVCACLCVCVCVCLCVC-VCLCV 185

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVC+CVCVC+C +C C+   V   V  C
Sbjct: 175 VCLCVCVCLCVCVCLCVCVCLC-VCVCLCVCVCLCVCVC 212

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVC+CVCVC+C +C C+   V   V  C
Sbjct: 187 VCLCVCVCLCVCVCLCVCVCLC-VCVCLCVCVCLCVCVC 224

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVC+CVCVC+C +C C+   V   V  C
Sbjct: 199 VCLCVCVCLCVCVCLCVCVCLC-VCVCLCVCVCLCVCVC 236

 Score = 36.6 bits (83), Expect(2) = 1e-04
 Identities = 14/41 (34%), Positives = 23/41 (55%), Gaps = 1/41 (2%)
 Frame = -3

Query: 283 CVCVCVCVCMCR-MCTCVGFVVDFRVFTCFERAMLILAVEG 164
           C+C+C+C+CMC  MC C+   +   +  C    M +  +EG
Sbjct: 371 CMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCIIEG 411

 Score = 36.6 bits (83), Expect = 0.083
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           +C  V      CVC+CVCVC+C +C C+   V   V  C
Sbjct: 169 LCVCVCVCLCVCVCLCVCVCLC-VCVCLCVCVCLCVCVC 206

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 313 CTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           C  V      CVCVC+CVC+C +C CV   V   +  C
Sbjct: 168 CLCVCVCVCLCVCVCLCVCVC-LCVCVCLCVCVCLCVC 204

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           VC  +   A  CVC C+CVC+C +C CV
Sbjct: 153 VCACLCVCACLCVCACLCVCVC-VCLCV 179

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           VC  +   A  CVC C+CVC C +C CV
Sbjct: 147 VCACLCVCACLCVCACLCVCAC-LCVCV 173

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           +C S+      C+C+C+C+CMC MC C+
Sbjct: 324 LCMSLCMCMCMCMCMCMCICMC-MCICI 350

 Score = 35.4 bits (80), Expect = 0.18
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  +   A  CVC C+CVC C +C C    V   V  C
Sbjct: 141 VCACLCVCACLCVCACLCVCAC-LCVCACLCVCVCVCLC 178

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 14/39 (35%), Positives = 19/39 (47%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V      CVC+CVCVC+C    C+   +   +  C
Sbjct: 275 VCVCVCLCVCLCVCLCVCVCVCVCLLCMSLCMCMCMCMC 313

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 13/28 (46%), Positives = 18/28 (63%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           VC  +      C+CVCVC+C+C +C CV
Sbjct: 165 VCACLCVCVCVCLCVCVCLCVC-VCLCV 191

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+CMC MC C+
Sbjct: 347 CICICMCMCMC-MCMCM 362

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+CMC MC C+
Sbjct: 343 CMCMCICICMC-MCMCM 358

 Score = 34.3 bits (77), Expect = 0.41
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           VC  V   AR C  VCVC C+C +C C+
Sbjct: 101 VCARVCVCARVCARVCVCACVC-VCACL 127

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCV 233
           +C  +      C+C+C+C+CMC MC C+
Sbjct: 318 MCMCMSLCMSLCMCMCMCMCMC-MCICM 344

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMC-RMCTCV 233
           +C S+      C+C+C+C+CMC  MC C+
Sbjct: 320 MCMSLCMSLCMCMCMCMCMCMCICMCMCI 348

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 17/39 (43%), Positives = 18/39 (45%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V   AR CVC  VCVC  R+C C        V  C
Sbjct: 83  VCARVCVCARVCVCARVCVC-ARVCVCARVCARVCVCAC 120

 Score = 33.5 bits (75), Expect = 0.70
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 282 VCVCVCVCVCAACVRVWVSLSTFECL 205
           +CVCVCVCVC  C+ + + +    C+
Sbjct: 289 LCVCVCVCVCLLCMSLCMCMCMCMCM 314

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+CMC MC C+
Sbjct: 359 CMCMCMCMCMC-MCMCM 374

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+CMC MC C+
Sbjct: 357 CMCMCMCMCMC-MCMCM 372

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+CMC MC C+
Sbjct: 355 CMCMCMCMCMC-MCMCM 370

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+CMC MC C+
Sbjct: 353 CMCMCMCMCMC-MCMCM 368

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 9/17 (52%), Positives = 15/17 (87%)
 Frame = -3

Query: 283 CVCVCVCVCMCRMCTCV 233
           C+C+C+C+C+C MC C+
Sbjct: 341 CICMCMCICIC-MCMCM 356

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 15/32 (46%), Positives = 18/32 (55%)
 Frame = -2

Query: 317 CLHVCGSLRAKLCVCVCVCVYVPHVYVCGFRC 222
           C+ VC  L   LCVC+CVCV V    +C   C
Sbjct: 274 CVCVCVCLCVCLCVCLCVCVCVCVCLLCMSLC 305

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 12/27 (44%), Positives = 16/27 (58%)
 Frame = -3

Query: 313 CTSVGAYARSCVCVCVCVCMCRMCTCV 233
           C  V A    C C+CVC C+C +C C+
Sbjct: 138 CLCVCACLCVCACLCVCACLC-VCACL 163

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 14/22 (63%), Positives = 15/22 (67%)
 Frame = -2

Query: 317 CLHVCGSLRAKLCVCVCVCVYV 252
           CL VC  L   LCVC+CVCV V
Sbjct: 256 CLCVCVCLCVCLCVCLCVCVCV 277

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -1

Query: 327 RWAVSARLWEPTREAVCVCVCVCVC-AACVRVWVSLSTFECL 205
           R  V AR+        CVCVC C+C  AC+ V   L    CL
Sbjct: 104 RVCVCARVCARVCVCACVCVCACLCVCACLCVCACLCVCACL 145

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 23/60 (38%), Positives = 27/60 (44%), Gaps = 5/60 (8%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVC--VCMC-RMCTCVGFVVDFRVF--TCFERAMLILAVEGVFAC 152
           V   V   AR C  VCVC  VC+C R+C C    V  RV    C    + + A   V AC
Sbjct: 73  VSVRVSVCARVCARVCVCARVCVCARVCVCARVCVCARVCARVCVCACVCVCACLCVCAC 132

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 7/35 (20%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCR-------MCTCV 233
           +C S+      C+C+C+C+CMC        MC C+
Sbjct: 300 LCMSLCMCMCMCMCMCMCMCMCMSLCMSLCMCMCM 334

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCV-----CVCMCRMCTCVGFVVDFRVFTCFERAM 185
           VC  V      CVCVC+     C+CMC MC C+   +   +  C    M
Sbjct: 283 VCLCVCLCVCVCVCVCLLCMSLCMCMC-MCMCMCMCMCMCMSLCMSLCM 330

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 18/42 (42%), Positives = 20/42 (46%), Gaps = 1/42 (2%)
 Frame = -1

Query: 327 RWAVSARLWEPTREAVCVCVCVCVC-AACVRVWVSLSTFECL 205
           R  V AR+    R    VCVC CVC  AC+ V   L    CL
Sbjct: 98  RVCVCARVCVCARVCARVCVCACVCVCACLCVCACLCVCACL 139

 Score = 28.9 bits (63), Expect(2) = 1e-04
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 317 CLHVCGSLRAKLCVCVCVCV 258
           C+ +C SL   LC+C+C+C+
Sbjct: 317 CMCMCMSLCMSLCMCMCMCM 336

>ref|XP_316923.1| ENSANGP00000023986 [Anopheles gambiae] gi|30175226|gb|EAA12549.2|
           ENSANGP00000023986 [Anopheles gambiae str. PEST]
          Length = 123

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 20/49 (40%), Positives = 25/49 (50%)
 Frame = +2

Query: 209 HSKVDNETHTRTHAAHTHTHTHTHTASRVGSHRRADTAQRRALAPPSSY 355
           H+     THT TH  HTHTH HTHT +   +H    T  +  L+  S Y
Sbjct: 56  HTPTHTHTHTHTHT-HTHTHIHTHTHTHTHTHTHTHTHLKLPLSALSKY 103

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +2

Query: 218 VDNETHTRTHAAHTHTHTHTHTASRVGSHRRADT 319
           +   THT TH  HTHTHTHTHT + + +H    T
Sbjct: 51  IHTHTHTPTHT-HTHTHTHTHTHTHIHTHTHTHT 83

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 18/53 (33%), Positives = 25/53 (46%), Gaps = 5/53 (9%)
 Frame = +2

Query: 209 HSKVDNETHTRTHA-----AHTHTHTHTHTASRVGSHRRADTAQRRALAPPSS 352
           H+     THT TH       HTHTHTHTHT  ++     +    R  +  P++
Sbjct: 62  HTHTHTHTHTHTHIHTHTHTHTHTHTHTHTHLKLPLSALSKYIARNVIVRPTA 114

 Score = 37.7 bits (86), Expect = 0.037
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +3

Query: 150 SHAKTPSTARISIALSKHVNTRKSTTKPTHVHMR---HIHTHTHTHTQLR 290
           +H  TP+          H +T   T   TH+H     H HTHTHTHT L+
Sbjct: 53  THTHTPT--------HTHTHTHTHTHTHTHIHTHTHTHTHTHTHTHTHLK 94

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 235 HTYTCGTYTHTHTHTHSFARRLPQTCRHRPAPRPRPTQFV 354
           HT+T  T+TH HTHTH+       T  H   P    ++++
Sbjct: 66  HTHT-HTHTHIHTHTHTHTHTHTHTHTHLKLPLSALSKYI 104

>dbj|BAC31276.1| unnamed protein product [Mus musculus]
          Length = 134

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 30/82 (36%), Positives = 39/82 (46%), Gaps = 2/82 (2%)
 Frame = -2

Query: 323 GRCLHVCGSLRAKLCVCVCVCVYVPHVYVCGFRCRLSSVYML*ESDANSCGGGRLCVRGA 144
           G C+ VC  +   + VCVC CV++P VYVC   C    VY+     A+      +CVR  
Sbjct: 40  GTCVCVCACVWVPVYVCVCECVWIP-VYVCVCACLWVPVYVC--VCASVWVPLCVCVRAC 96

Query: 143 T--SPLDSECFSLIGCELLGLR 84
                +D EC S  GC    LR
Sbjct: 97  VWRPEVDLECCSSDGCPTCVLR 118

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = -2

Query: 317 CLHVCGSLRAKLCVCVCVCVYVPHVYVCGFRCRLSSVYM 201
           C+ VC  +    CVCVC CV+VP VYVC   C    VY+
Sbjct: 30  CMCVCVCMCVGTCVCVCACVWVP-VYVCVCECVWIPVYV 67

 Score = 38.9 bits (89), Expect = 0.017
 Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = -3

Query: 313 CTSVGAYARSCV---CVCVCVCMC-RMCTCVGFVVDFRVFTCFERAMLILAVEGVFAC 152
           C  V  Y   CV   C+CVCVCMC   C CV   V   V+ C    + I     V AC
Sbjct: 15  CVRVPVYVCMCVGTLCMCVCVCMCVGTCVCVCACVWVPVYVCVCECVWIPVYVCVCAC 72

>dbj|BAC35524.1| unnamed protein product [Mus musculus]
          Length = 146

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 19/39 (48%), Positives = 22/39 (55%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMCRMCTCVGFVVDFRVFTC 200
           VC  V  Y   CVCVCVCVC+C +C C+   V   V  C
Sbjct: 95  VCVCVCLYVCVCVCVCVCVCVC-VCVCMRVSVYMCVCVC 132

 Score = 39.3 bits (90), Expect = 0.013
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 316 VCTSVGAYARSCVCVCVCVCMC-RMCTCVGFVVDFRVFTC 200
           VC  V  YA  CVCV VCVC+C  +C CV   V   V  C
Sbjct: 79  VCVCVCMYACVCVCVYVCVCVCLYVCVCVCVCVCVCVCVC 118

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 15/29 (51%), Positives = 18/29 (61%), Gaps = 1/29 (3%)
 Frame = -3

Query: 283 CVCVCVCVCM-CRMCTCVGFVVDFRVFTC 200
           CVCVCVCVCM   +C CV   V   ++ C
Sbjct: 76  CVCVCVCVCMYACVCVCVYVCVCVCLYVC 104

 Score = 35.0 bits (79), Expect = 0.24
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 285 AVCVCVCVCVCA-ACVRVWVSLSTFECLH 202
           ++CVCVCVCVC  ACV V V +    CL+
Sbjct: 74  SLCVCVCVCVCMYACVCVCVYVCVCVCLY 102

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = -3

Query: 283 CVCVCV----CVCMC-RMCTCVGFVVDFRVFTC 200
           CVCVCV    CVC+C  +C CV   V   V  C
Sbjct: 78  CVCVCVCMYACVCVCVYVCVCVCLYVCVCVCVC 110

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 10/21 (47%), Positives = 15/21 (70%)
 Frame = -2

Query: 317 CLHVCGSLRAKLCVCVCVCVY 255
           C+ VC  +   +CVCVC+CV+
Sbjct: 116 CVCVCMRVSVYMCVCVCMCVF 136

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -2

Query: 317 CLHVCGSLRAKLCVCVCVCVYVPHVYVCGFRC 222
           C+ VC  + A +CVCV VCV V  +YVC   C
Sbjct: 78  CVCVCVCMYACVCVCVYVCVCV-CLYVCVCVC 108

>ref|XP_310629.1| ENSANGP00000023115 [Anopheles gambiae] gi|30177896|gb|EAA45095.1|
           ENSANGP00000023115 [Anopheles gambiae str. PEST]
          Length = 83

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 18/35 (51%), Positives = 20/35 (56%), Gaps = 4/35 (11%)
 Frame = -3

Query: 343 WGEGAALGGVC----TSVGAYARSCVCVCVCVCMC 251
           WG      G+C    TS+  Y   CVCVCVCVCMC
Sbjct: 44  WGRNVGSFGICDTIVTSMCFYLCVCVCVCVCVCMC 78

 Score = 33.9 bits (76), Expect = 0.54
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -2

Query: 350 NWVGRGRGA-GRCLHVCGSLRAKLCVCVCVCVYVPHVYVCGFR 225
           NW GR  G+ G C  +  S+   LCVCVCVCV V  + VCG R
Sbjct: 43  NW-GRNVGSFGICDTIVTSMCFYLCVCVCVCVCV-CMCVCGRR 83



EST assemble image


clone accession position
1 MXL074g06_r BP097383 1 311
2 HCL086d10_r BP097383 75 500




Chlamydomonas reinhardtii
Kazusa DNA Research Institute