KCC002674A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002674A_C01 KCC002674A_c01
ccggcgcgtggggcaacctcaccgttgccaacttcaccaacactaactggatcaggggcc
tggtcattcccgcccagggcACCCGCGATGACAACATGATCGTGGTCAACGTGGGCGCTG
AGAGCACCCAGATCGGAGCAGCGAAGGCTACCGGCGCTCAGGCCTACTACTTCTCCTACC
GCATTAAGAACACCACCGCAGGTGGCTACGACTCTGGCCTGACCTCAGACTTCCATAAGA
AGGTGCTGGTCCACGCCTACAACGGCATCCAGTCGGAGCGCGTGTTTGGCTTCAAGTCCA
ACCTGCTGGACTGGGGCCCGAACTTCCAGTCCAGGAGCAACACCTGGACTTCACCCTTCC
TGGCGGTTACCAACGATCTGGGCGGTGGCGTGAGGCTAGTGGTGCAGAGCACTTCTGACA
CACAGGCCGTGGTTGACATCTGCCGCATCACTGAGAACGGCAAGGAGCTGTCGTGCGACG
ATGGTATTGACAACGACTGCGACGGCTTGCAGGATACTGAGGATCCCGACTGCCAGTAAA
GCCGTGCCACCAATTACCGTACCGTAGTGTGCATGCTGCTGCAGTAGTATCTAGTTTATA
AGACTACGGTTTCTGGTGTGGTCGTCATGCATTGCCTGCGCATGAGGGAGATGCAATTGC
TTTGTGCAAGTCTGCCCTATGTCTGATACAACTGACGGCGGTCCTGTGCAAGCTGCGGTT
GGCGTGACTGTTGTGTAGAGGTGGCCGGGTCCATCCAACTCACGCCCATGGCCAGTTGTG
ACAGTTGCGGTGTTGCTGTTGATTTTGGTACATAGACTTAAGAGGCCGCAAGGTCTTTCG
TTCGTCTGGCTCGTAATATGGCGCTAACGCCCTTCAGCAGGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002674A_C01 KCC002674A_c01
         (883 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718...   370  e-101
sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete ly...   342  6e-93
dbj|BAB68383.1| matrix metalloprotease 2 [Chlamydomonas reinhard...   293  3e-78
dbj|BAB85218.1| matrix metalloproteinase [Volvox carteri f. naga...    76  8e-13
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil...    47  4e-04

>dbj|BAB68382.1| gametolysin [Chlamydomonas reinhardtii] gi|15718395|dbj|BAB68384.1|
           gametolysin [Chlamydomonas reinhardtii]
          Length = 639

 Score =  370 bits (951), Expect = e-101
 Identities = 178/178 (100%), Positives = 178/178 (100%)
 Frame = +3

Query: 3   GAWGNLTVANFTNTNWIRGLVIPAQGTRDDNMIVVNVGAESTQIGAAKATGAQAYYFSYR 182
           GAWGNLTVANFTNTNWIRGLVIPAQGTRDDNMIVVNVGAESTQIGAAKATGAQAYYFSYR
Sbjct: 462 GAWGNLTVANFTNTNWIRGLVIPAQGTRDDNMIVVNVGAESTQIGAAKATGAQAYYFSYR 521

Query: 183 IKNTTAGGYDSGLTSDFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL 362
           IKNTTAGGYDSGLTSDFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL
Sbjct: 522 IKNTTAGGYDSGLTSDFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL 581

Query: 363 AVTNDLGGGVRLVVQSTSDTQAVVDICRITENGKELSCDDGIDNDCDGLQDTEDPDCQ 536
           AVTNDLGGGVRLVVQSTSDTQAVVDICRITENGKELSCDDGIDNDCDGLQDTEDPDCQ
Sbjct: 582 AVTNDLGGGVRLVVQSTSDTQAVVDICRITENGKELSCDDGIDNDCDGLQDTEDPDCQ 639

>sp|P31178|GLE_CHLRE Autolysin precursor (Gametolysin) (Gamete lytic enzyme) (GLE)
           gi|541537|pir||A45287 gamete lytic enzyme (EC 3.4.24.-)
           precursor - Chlamydomonas reinhardtii
           gi|167439|gb|AAA33094.1| cell wall lytic enzyme
           gi|217895|dbj|BAA01400.1| GLE preproprotein
           [Chlamydomonas reinhardtii]
          Length = 638

 Score =  342 bits (876), Expect = 6e-93
 Identities = 164/178 (92%), Positives = 167/178 (93%)
 Frame = +3

Query: 3   GAWGNLTVANFTNTNWIRGLVIPAQGTRDDNMIVVNVGAESTQIGAAKATGAQAYYFSYR 182
           GAWGNLT ANFT   WIRGLVIPAQGTRDDNMIVVNVGA+ST+ GA KATGAQAYYFSYR
Sbjct: 461 GAWGNLTAANFTTDPWIRGLVIPAQGTRDDNMIVVNVGAQSTRDGAMKATGAQAYYFSYR 520

Query: 183 IKNTTAGGYDSGLTSDFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL 362
           IKNTTAGGYDSGLT DFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL
Sbjct: 521 IKNTTAGGYDSGLTLDFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL 580

Query: 363 AVTNDLGGGVRLVVQSTSDTQAVVDICRITENGKELSCDDGIDNDCDGLQDTEDPDCQ 536
           A  N LGGGVRLVVQSTSDTQAVVDICRI+ENGKELSCDDGIDNDCDGLQD EDPDCQ
Sbjct: 581 AYNNGLGGGVRLVVQSTSDTQAVVDICRISENGKELSCDDGIDNDCDGLQDNEDPDCQ 638

>dbj|BAB68383.1| matrix metalloprotease 2 [Chlamydomonas reinhardtii]
            gi|15718397|dbj|BAB68385.1| matrix metalloprotease 2
            [Chlamydomonas reinhardtii]
          Length = 635

 Score =  293 bits (750), Expect = 3e-78
 Identities = 145/193 (75%), Positives = 155/193 (80%), Gaps = 15/193 (7%)
 Frame = +3

Query: 3    GAWGNLTVANFTNTNWIRGLVIPAQGTRDDNMIVVNVGAESTQIGAAKATGAQAYYFSYR 182
            G WGNLT ANFTNTNWIRGL+IPAQGTRDDNMIVVNVGA STQ+GA  ATGAQAYYFSYR
Sbjct: 443  GVWGNLTAANFTNTNWIRGLIIPAQGTRDDNMIVVNVGARSTQVGAETATGAQAYYFSYR 502

Query: 183  IKNTTAGGYDSGLTSDFHKKVLVHAYNGIQSERVFGFKSNLLDWGPNFQSRSNTWTSPFL 362
            IKNTTAGGYDSGLTSDFHKKV+VHA+NGIQSERVFGFK +LLDWGPNFQS+S        
Sbjct: 503  IKNTTAGGYDSGLTSDFHKKVVVHAFNGIQSERVFGFKPSLLDWGPNFQSKSEPVFQNDD 562

Query: 363  AVTNDLGGGVRLV---------------VQSTSDTQAVVDICRITENGKELSCDDGIDND 497
              +   GG +                  VQSTSDTQAVVDICRITENGKELSCDDG+DND
Sbjct: 563  GTSGCHGGHLDFTLPGGYQRSGRWREAGVQSTSDTQAVVDICRITENGKELSCDDGVDND 622

Query: 498  CDGLQDTEDPDCQ 536
            C+GLQDTEDPDCQ
Sbjct: 623  CNGLQDTEDPDCQ 635

>dbj|BAB85218.1| matrix metalloproteinase [Volvox carteri f. nagariensis]
          Length = 625

 Score = 75.9 bits (185), Expect = 8e-13
 Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
 Frame = +3

Query: 147 ATGAQAYYFSYRIKNTT-----------AGGYDSGLTSDFHKKVLVHAYNGIQSERVFGF 293
           AT   A Y  Y I  T               YD+ L +  + +V VH +NG  +ER   +
Sbjct: 379 ATDTNALYLRYNINGTPFPNIFVSFRSRTSRYDNALATYMNNRVFVHNFNGSATER--DY 436

Query: 294 KSNLLDWGPNFQSRSNTWTSPFLAVT--NDLGGGVRL-VVQSTSDTQAVVDICRITENGK 464
              LL       +  + +TSPFL  T  +D G GV++ V+   + T A V++CR+TE   
Sbjct: 437 NRTLL---VAVMAAGDVYTSPFLGNTTFDDSGLGVKIRVISIAAGTSATVEVCRLTEK-V 492

Query: 465 ELSCDDGIDNDCDGLQDTEDPDC 533
           E SC DG DNDC+GL D  DP C
Sbjct: 493 ETSCFDGDDNDCNGLTDELDPAC 515

 Score = 33.9 bits (76), Expect = 3.7
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 13  ATSPLPTSPTLTGSGAWSFPPRAPAMTT*SWSTWALRAPRSEQRR-LPALRPTTSPTALR 189
           A+SP P+SP +  S + S PP  P   +   S      PRS  R  LP  RP TSP    
Sbjct: 518 ASSPPPSSPNVPPSPSKSPPPSPPPPISKPPSPRPPPRPRSPPRSPLPPPRPPTSPP--- 574

Query: 190 TPPQVATTLA 219
            PPQ+  + A
Sbjct: 575 PPPQLKASKA 584

>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
            gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
            melanogaster]
          Length = 1225

 Score = 47.0 bits (110), Expect = 4e-04
 Identities = 55/201 (27%), Positives = 79/201 (38%), Gaps = 16/201 (7%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 813  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSCPTTTTPRST 870

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACL------------ASSPTCWTGARTSS 330
             T      T   P+++   C S PTT + RS               +++ TC +G  T++
Sbjct: 871  TTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTT 930

Query: 331  PGATPGLHPSWRLPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTT---TA 501
            P +T     S   PT              T R   T++ S  T  + R+T   TT   T 
Sbjct: 931  PRST--TKTSTCAPT------------TTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTT 976

Query: 502  TACRILRIPTASKAVPPITVP 564
            T  R    P+ S+  P  T P
Sbjct: 977  TTPRSTTTPSTSR--PTTTTP 995

 Score = 43.1 bits (100), Expect = 0.006
 Identities = 49/196 (25%), Positives = 70/196 (35%), Gaps = 13/196 (6%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 765  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 822

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLAS------------SPTCWTGARTSS 330
             T      T   P+++     S PTT + RS    S            + TC +G  T++
Sbjct: 823  TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTT 882

Query: 331  PGATPGLHPSWRLPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATAC 510
            P +T     S              C    T R   T+  S  T  + R+T    T+    
Sbjct: 883  PRSTTTTCTS--------------CPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTT 928

Query: 511  RILRIPTASKAVPPIT 558
               R  T +    P T
Sbjct: 929  TTPRSTTKTSTCAPTT 944

 Score = 43.1 bits (100), Expect = 0.006
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 717  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 774

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
             T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 775  TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 830

Query: 367  LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
              T              T R   T++ S  T  + R+T   TTT+T+C     P    T 
Sbjct: 831  TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSCPTTTTPRSTTTT 873

Query: 535  SKAVPPITVP 564
              + P  T P
Sbjct: 874  CTSGPTTTTP 883

 Score = 42.7 bits (99), Expect = 0.008
 Identities = 53/192 (27%), Positives = 73/192 (37%), Gaps = 7/192 (3%)
 Frame = +1

Query: 10   GATSPLPTSPTLTGSGA-WSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T + A  +  PR+   TT S S      PRS      +   TT+P + 
Sbjct: 925  GPTTTTPRSTTKTSTCAPTTTTPRST--TTTSTSRPTTTTPRSTTTTTTSRPTTTTPRST 982

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLAS--SPTCWTGARTSSPGATPGLHPS 360
             TP     T   P+++     S PTT + RS    S  +PT  T   T++   T    P+
Sbjct: 983  TTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPTTTTPRSTTT---TTTSRPT 1039

Query: 361  WRLPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMV----LTTTATACRILRIP 528
               P               T RP  T+  S  T  + R T       TTT T+      P
Sbjct: 1040 TTTPRSTTTT--------TTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTP 1091

Query: 529  TASKAVPPITVP 564
             ++    P T P
Sbjct: 1092 RSTTTPCPTTTP 1103

 Score = 42.4 bits (98), Expect = 0.010
 Identities = 54/209 (25%), Positives = 76/209 (35%), Gaps = 22/209 (10%)
 Frame = +1

Query: 4   ARGATSPLPTSPTLTGSGAWSFPPRAPAMTT*--------SWSTWALRAPRSEQRRLPAL 159
           A+  T+P  T+ T T     + P      TT         S +T   R P +   R    
Sbjct: 218 AQTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTT 277

Query: 160 RPTTSPTALRTPPQVATTLA*PQTSIRRCWSTPTTAS-------SRSACLASSPTCWTGA 318
             T +PT         TT + P T+  RC +T +T S       S +    S PT  T  
Sbjct: 278 TSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPTRTTPRSTTTTSTSRPTTTTPR 337

Query: 319 RTSSPGATPGLHPSWRLPTIWAVA*G*WCRA---LLTHRPWLTSAASLRTARSCRATMVL 489
            T++P  T    P+   P          C +     T R   T+  S  T  + R+T   
Sbjct: 338 CTTTPSTTCTRRPTTTTPRSTTTT----CTSGPTTTTPRSTTTTCTSGPTTTTPRST--- 390

Query: 490 TTTATACRILRIP----TASKAVPPITVP 564
           TTT+T+      P    T S + P  T P
Sbjct: 391 TTTSTSGPTTTTPRSTTTTSTSGPTTTTP 419

 Score = 40.4 bits (93), Expect = 0.039
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 669  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 726

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
             T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 727  TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 782

Query: 367  LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
              T              T R   T++ S  T  + R+T   TTT+T+      P    T 
Sbjct: 783  TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTT 825

Query: 535  SKAVPPITVP 564
            S + P  T P
Sbjct: 826  STSGPTTTTP 835

 Score = 40.4 bits (93), Expect = 0.039
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10  GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
           G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 445 GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 502

Query: 187 RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
            T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 503 TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 558

Query: 367 LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
             T              T R   T++ S  T  + R+T   TTT+T+      P    T 
Sbjct: 559 TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTT 601

Query: 535 SKAVPPITVP 564
           S + P  T P
Sbjct: 602 STSGPTTTTP 611

 Score = 40.4 bits (93), Expect = 0.039
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 589  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 646

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
             T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 647  TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 702

Query: 367  LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
              T              T R   T++ S  T  + R+T   TTT+T+      P    T 
Sbjct: 703  TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTT 745

Query: 535  SKAVPPITVP 564
            S + P  T P
Sbjct: 746  STSGPTTTTP 755

 Score = 40.4 bits (93), Expect = 0.039
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 557  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 614

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
             T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 615  TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 670

Query: 367  LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
              T              T R   T++ S  T  + R+T   TTT+T+      P    T 
Sbjct: 671  TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTT 713

Query: 535  SKAVPPITVP 564
            S + P  T P
Sbjct: 714  STSGPTTTTP 723

 Score = 40.4 bits (93), Expect = 0.039
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10   GATSPLPTSPTLTG-SGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
            G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 525  GPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 582

Query: 187  RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
             T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 583  TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 638

Query: 367  LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
              T              T R   T++ S  T  + R+T   TTT+T+      P    T 
Sbjct: 639  TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTT 681

Query: 535  SKAVPPITVP 564
            S + P  T P
Sbjct: 682  STSGPTTTTP 691

 Score = 40.0 bits (92), Expect = 0.051
 Identities = 35/119 (29%), Positives = 49/119 (40%), Gaps = 6/119 (5%)
 Frame = +1

Query: 22   PLPTSPTLTGSGAWSFPPRAPAMTT*SWSTWA--LRAPRSEQRRLPALRPTTSPTALRTP 195
            P  T+P  T + + S P      +T   ST A     PRS      +   TT+P +  T 
Sbjct: 990  PTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPTTTTPRSTTTTTTSRPTTTTPRSTTTT 1049

Query: 196  PQVATTLA*PQTSIRRCWSTPTTASSRS--ACLASSPTCWTGARTSS--PGATPGLHPS 360
                 T   P+++   C S PTT + RS      S PT  T   T++  P  TP   P+
Sbjct: 1050 TTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSASPT 1108

 Score = 39.7 bits (91), Expect = 0.067
 Identities = 52/190 (27%), Positives = 76/190 (39%), Gaps = 5/190 (2%)
 Frame = +1

Query: 10  GATSPLPTSPTLT-GSGAWSFPPRAPAMTT*SWSTWALRAPRSEQRRLPALRPTTSPTAL 186
           G T+  P S T T  SG  +  PR+   T+ S  T     PRS      +   TT+P + 
Sbjct: 365 GPTTTTPRSTTTTCTSGPTTTTPRSTTTTSTSGPTTT--TPRSTTTTSTSGPTTTTPRST 422

Query: 187 RTPPQVATTLA*PQTSIRRCWSTPTTASSRSACLASSPTCWTGARTSSPGATPGLHPSWR 366
            T      T   P+++     S PTT + RS    ++ T  +G  T++P +T     S  
Sbjct: 423 TTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSGP 478

Query: 367 LPTIWAVA*G*WCRALLTHRPWLTSAASLRTARSCRATMVLTTTATACRILRIP----TA 534
             T              T R   T++ S  T  + R+T   TTT+T+      P    T 
Sbjct: 479 TTT--------------TPRSTTTTSTSGPTTTTPRST---TTTSTSGPTTTTPRSTTTT 521

Query: 535 SKAVPPITVP 564
           S + P  T P
Sbjct: 522 STSGPTTTTP 531



EST assemble image


clone accession position
1 MX026f11_r BP087146 1 506
2 HCL084d10_r AV644232 352 827
3 HCL094f06_r AV644849 458 883




Chlamydomonas reinhardtii
Kazusa DNA Research Institute