KCC002648A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002648A_C01 KCC002648A_c01
gttcaacgatggtagcatactCCATGCCATACATGGAAATGATCTTACTTGAAGCTGTAT
TGTAAGGAGCGTTCAAACATGACCGAAGGCCTAGCGGGCCTTGGGCGTGGCGCCCGTGTG
TTTTACCGGAAGGATGCTTCAACCTGGCAACAGGGCGAGCTCGTTTCTCTGAGCGATGGG
AAGGCGGCAATTCAAGTTGGAGGGCAATCGCTGACCGTCGCTTCTGACCTCGTCGTCGCT
GCGAACCCAGTGCTTCAGGATGGTATCCCTGATGTGGTGCAGCTCTCTTACCTCAACGAG
CCGGGCATTCTCTACAACCTGGAGCACAGGTTCGCGGGGGCTACAGCTTCGATCGCTCGC
CTGGGTTTGGAGTTGTTTGCAACTACTTGTGCAACACTGGGCGTCCTTGGAGTGCACATA
CTGTCTCTGAGCGCGGGCGGCGCGTTCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002648A_C01 KCC002648A_c01
         (449 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_175453.1| myosin -related [Arabidopsis thaliana]                65  3e-10
pir||G96539 hypothetical protein F14I3.6 [imported] - Arabidopsi...    65  3e-10
dbj|BAC83394.1| putative myosin [Oryza sativa (japonica cultivar...    63  1e-09
gb|AAQ87012.1| myosin heavy chain class VIII A1 protein [Oryza s...    63  1e-09
gb|AAQ87013.1| myosin heavy chain class VIII A2 protein [Oryza s...    63  1e-09

>ref|NP_175453.1| myosin -related [Arabidopsis thaliana]
          Length = 1085

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +1

Query: 145 WQQGELVSLSDGKAAIQVG-GQSLTVASDLVVAANPVLQDGIPDVVQLSYLNEPGILYNL 321
           W+ G+++S S  ++ I V  G+ L V S+ +V ANP + DG+ D++QLSYLNEP +LYNL
Sbjct: 128 WELGKIMSTSGEESVIVVTEGKVLKVKSETLVPANPDILDGVDDLMQLSYLNEPAVLYNL 187

Query: 322 EHRF 333
           E+R+
Sbjct: 188 EYRY 191

>pir||G96539 hypothetical protein F14I3.6 [imported] - Arabidopsis thaliana
           gi|5734787|gb|AAD50052.1|AC007980_17 Highly similar to
           myosin [Arabidopsis thaliana]
          Length = 1155

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +1

Query: 145 WQQGELVSLSDGKAAIQVG-GQSLTVASDLVVAANPVLQDGIPDVVQLSYLNEPGILYNL 321
           W+ G+++S S  ++ I V  G+ L V S+ +V ANP + DG+ D++QLSYLNEP +LYNL
Sbjct: 118 WELGKIMSTSGEESVIVVTEGKVLKVKSETLVPANPDILDGVDDLMQLSYLNEPAVLYNL 177

Query: 322 EHRF 333
           E+R+
Sbjct: 178 EYRY 181

>dbj|BAC83394.1| putative myosin [Oryza sativa (japonica cultivar-group)]
          Length = 1253

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/80 (37%), Positives = 53/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 100 LGRGARVFYRKDASTWQQGELVSLS-DGKAAIQVGGQSLTVASDLVVAANPVLQDGIPDV 276
           L +  RV+     +TW+ G++ S+S D    + V G+ LT++ D ++ ANP + DG+ ++
Sbjct: 181 LQKKLRVWCSSPDATWKLGQIQSVSGDDVEILLVNGEVLTLSPDRLLPANPDILDGVDNL 240

Query: 277 VQLSYLNEPGILYNLEHRFA 336
           + LSYLNEP +LY+L+ R++
Sbjct: 241 IHLSYLNEPSVLYDLQSRYS 260

>gb|AAQ87012.1| myosin heavy chain class VIII A1 protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 1219

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/80 (37%), Positives = 53/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 100 LGRGARVFYRKDASTWQQGELVSLS-DGKAAIQVGGQSLTVASDLVVAANPVLQDGIPDV 276
           L +  RV+     +TW+ G++ S+S D    + V G+ LT++ D ++ ANP + DG+ ++
Sbjct: 181 LQKKLRVWCSSPDATWKLGQIQSVSGDDVEILLVNGEVLTLSPDRLLPANPDILDGVDNL 240

Query: 277 VQLSYLNEPGILYNLEHRFA 336
           + LSYLNEP +LY+L+ R++
Sbjct: 241 IHLSYLNEPSVLYDLQSRYS 260

>gb|AAQ87013.1| myosin heavy chain class VIII A2 protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 1128

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 30/80 (37%), Positives = 53/80 (65%), Gaps = 1/80 (1%)
 Frame = +1

Query: 100 LGRGARVFYRKDASTWQQGELVSLS-DGKAAIQVGGQSLTVASDLVVAANPVLQDGIPDV 276
           L +  RV+     +TW+ G++ S+S D    + V G+ LT++ D ++ ANP + DG+ ++
Sbjct: 181 LQKKLRVWCSSPDATWKLGQIQSVSGDDVEILLVNGEVLTLSPDRLLPANPDILDGVDNL 240

Query: 277 VQLSYLNEPGILYNLEHRFA 336
           + LSYLNEP +LY+L+ R++
Sbjct: 241 IHLSYLNEPSVLYDLQSRYS 260



EST assemble image


clone accession position
1 HCL076c10_r AV643801 1 449
2 MXL057d02_r BP096355 22 405




Chlamydomonas reinhardtii
Kazusa DNA Research Institute