Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002646A_C01 KCC002646A_c01
(478 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF68967.1|AF246705_1 putative serine-rich protein [Homo sapi... 37 0.12
emb|CAC39317.1| VMP2 protein [Volvox carteri f. nagariensis] 37 0.12
ref|NP_060102.1| collaborates/cooperates with ARF (alternate rea... 37 0.12
emb|CAD31316.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti] 37 0.15
ref|NP_502696.1| DNA-binding SAP containing protein (4O841) [Cae... 36 0.20
>gb|AAF68967.1|AF246705_1 putative serine-rich protein [Homo sapiens]
Length = 631
Score = 37.0 bits (84), Expect = 0.12
Identities = 28/76 (36%), Positives = 35/76 (45%), Gaps = 2/76 (2%)
Frame = -2
Query: 465 SSGMRKQARSALVRPTQASSTSRNDAPRRIEAGLEGHAS-AEAPEKQAPAPFTSRSASGS 289
SSG+ Q S SS S + ++ G AS AEAP+K A F S S
Sbjct: 244 SSGISSQNSSTSDGDRSVSSQSSSSVSSQVTTAGSGKASEAEAPDKHGSASFVSLLKSSV 303
Query: 288 AVHMLK-TDSMEQDGS 244
HM + TDS +Q GS
Sbjct: 304 NSHMTQSTDSRQQSGS 319
>emb|CAC39317.1| VMP2 protein [Volvox carteri f. nagariensis]
Length = 588
Score = 37.0 bits (84), Expect = 0.12
Identities = 22/58 (37%), Positives = 26/58 (43%)
Frame = +3
Query: 228 PPPQLSSRPAPCCPSSACAPRYRWRSVT*TAPAPASQEPPRWRAPPNRLRYAVGRRSS 401
PPP P PS P WRS P P + PP WR+PP+R R R+ S
Sbjct: 524 PPPPTKPPPKSPPPSRMPPP---WRS----PPPPRTSPPPPWRSPPHRRRQPPPRKVS 574
>ref|NP_060102.1| collaborates/cooperates with ARF (alternate reading frame) protein
[Homo sapiens] gi|7019869|dbj|BAA90902.1| unnamed
protein product [Homo sapiens]
Length = 580
Score = 37.0 bits (84), Expect = 0.12
Identities = 28/76 (36%), Positives = 35/76 (45%), Gaps = 2/76 (2%)
Frame = -2
Query: 465 SSGMRKQARSALVRPTQASSTSRNDAPRRIEAGLEGHAS-AEAPEKQAPAPFTSRSASGS 289
SSG+ Q S SS S + ++ G AS AEAP+K A F S S
Sbjct: 193 SSGISSQNSSTSDGDRSVSSQSSSSVSSQVTTAGSGKASEAEAPDKHGSASFVSLLKSSV 252
Query: 288 AVHMLK-TDSMEQDGS 244
HM + TDS +Q GS
Sbjct: 253 NSHMTQSTDSRQQSGS 268
>emb|CAD31316.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti]
Length = 111
Score = 36.6 bits (83), Expect = 0.15
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +3
Query: 18 SAPTAQTHSSRHPCNSFANSK--RARDCQLVSAPACCTFLWALQQSLLAFKQGSSGSKS- 188
S P AQ H S++ S+ RA+ +L C F +L + + + G K+
Sbjct: 12 SGPRAQAWVRSHSAASYSRSRLCRAQANELERTAPGCGFRQSLMELAGELARSAFGWKTG 71
Query: 189 VQGSAVINNAR-RWPPPQLSSRPAPCCPSSACAP 287
++G+ A+ RW P L SRP CC ++ P
Sbjct: 72 LRGANETELAKPRWSMPSLGSRPCTCCSAAFAKP 105
>ref|NP_502696.1| DNA-binding SAP containing protein (4O841) [Caenorhabditis elegans]
gi|7509538|pir||T22490 hypothetical protein Y37A1B.1 -
Caenorhabditis elegans gi|3877428|emb|CAB05201.1|
Hypothetical protein Y37A1B.1a [Caenorhabditis elegans]
gi|3880782|emb|CAA19496.1| Hypothetical protein
Y37A1B.1a [Caenorhabditis elegans]
Length = 1222
Score = 36.2 bits (82), Expect = 0.20
Identities = 24/72 (33%), Positives = 31/72 (42%), Gaps = 3/72 (4%)
Frame = -3
Query: 419 HRHPPHRGTTPHGVSKPVWRGTPARRLLRSRRRRRSRHAPP---AVARCTC*RRTAWSRT 249
H PP R + P S P PAR + SR R R +PP A + +A ++
Sbjct: 227 HSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPSAPAKN 286
Query: 248 ARKLGRGPSSGV 213
RK R PS V
Sbjct: 287 DRKRERSPSGSV 298
