KCC002641A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002641A_C01 KCC002641A_c01
caaccatgcaggtggacgaCGACGTGAGCCGCTCGCCAGCACCCTCGCCCCGCGCAATGA
AGCGGCCACGGCCGCTGAAGGTGCTGCCAGGCAACATGGACGATGAGGTCAGCAGCCAGA
GCCAGAGCCAAAGTCGGTCTGTCGGCGAGCCCAGCACGTGTAGCAAGGCGCTTTCAGGCC
GGCCGCCCATCCCCAAGCTGCGCGAGGTGCAGCCTCCCATGCCGCGCAACCCCTACCTGG
TGCGGGCGGATGACGACAACCACGTGTTCCAGGCGTCACAGTCCTGCCTCAACCGCGGCA
ACTACAGCCGCTTCCTGTGGGACTACCACCAGGAGGCGGAGCTGGGCCACGGCAATTTCA
GCAAGGTGTACAAAGCGGTGCACCGCCTCACCGGCATCGCGTACGCAGTGAAAACCAACA
AGGTGCCCATCACCACGCTACAAGCGCGCAACATGTGGCTGAACGAGATGCAAGCGCTGG
CGGCAGTTCAGCCCCACCCCAACATCGTGGGCTTGTATGACACGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002641A_C01 KCC002641A_c01
         (525 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||C86160 hypothetical protein F22D16.3 - Arabidopsis thaliana...    65  7e-10
ref|NP_171796.1| protein kinase, putative [Arabidopsis thaliana]...    65  7e-10
emb|CAA12274.1| wee1-like kinase [Platynereis dumerilii]               64  1e-09
gb|AAD52983.1|AF123594_1 Wee1-like protein [Zea mays]                  62  3e-09
gb|AAM34286.1|AF509327_1 putative cell cycle regulatory protein ...    55  7e-07

>pir||C86160 hypothetical protein F22D16.3 - Arabidopsis thaliana
           gi|6056405|gb|AAF02869.1|AC009525_3 Similar to Wee1
           protein kinase [Arabidopsis thaliana]
          Length = 519

 Score = 64.7 bits (156), Expect = 7e-10
 Identities = 40/119 (33%), Positives = 62/119 (51%), Gaps = 9/119 (7%)
 Frame = +3

Query: 195 KLREVQPPMPRNPYLVR-----ADDDNHVFQASQSCL----NRGNYSRFLWDYHQEAELG 347
           + R + PP  +NPY++       D   H      S L    +    SR+L D+H+  ++G
Sbjct: 197 RCRAMPPPCLKNPYVLNQSETATDPFGHQRSKCASFLPVSTSGDGLSRYLTDFHEIRQIG 256

Query: 348 HGNFSKVYKAVHRLTGIAYAVKTNKVPITTLQARNMWLNEMQALAAVQPHPNIVGLYDT 524
            G+FS+V+K + R+ G  YAVK +   +     R   + E+QALAA+  H NIVG Y +
Sbjct: 257 AGHFSRVFKVLKRMDGCLYAVKHSTRKLYLDSERRKAMMEVQALAALGFHENIVGYYSS 315

>ref|NP_171796.1| protein kinase, putative [Arabidopsis thaliana]
           gi|21953366|emb|CAD28679.1| protein kinase [Arabidopsis
           thaliana] gi|22761819|dbj|BAC11716.1| Wee1 kinase
           [Arabidopsis thaliana]
          Length = 500

 Score = 64.7 bits (156), Expect = 7e-10
 Identities = 40/119 (33%), Positives = 62/119 (51%), Gaps = 9/119 (7%)
 Frame = +3

Query: 195 KLREVQPPMPRNPYLVR-----ADDDNHVFQASQSCL----NRGNYSRFLWDYHQEAELG 347
           + R + PP  +NPY++       D   H      S L    +    SR+L D+H+  ++G
Sbjct: 197 RCRAMPPPCLKNPYVLNQSETATDPFGHQRSKCASFLPVSTSGDGLSRYLTDFHEIRQIG 256

Query: 348 HGNFSKVYKAVHRLTGIAYAVKTNKVPITTLQARNMWLNEMQALAAVQPHPNIVGLYDT 524
            G+FS+V+K + R+ G  YAVK +   +     R   + E+QALAA+  H NIVG Y +
Sbjct: 257 AGHFSRVFKVLKRMDGCLYAVKHSTRKLYLDSERRKAMMEVQALAALGFHENIVGYYSS 315

>emb|CAA12274.1| wee1-like kinase [Platynereis dumerilii]
          Length = 614

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 31/94 (32%), Positives = 50/94 (52%)
 Frame = +3

Query: 237 LVRADDDNHVFQASQSCLNRGNYSRFLWDYHQEAELGHGNFSKVYKAVHRLTGIAYAVKT 416
           L+  D ++ +    +  L   N  R+  ++HQ ++LG G F  VYK +HRL G  YA+K 
Sbjct: 229 LIEEDLEDDMPSTKKIALREINTFRYNEEFHQVSKLGDGEFGSVYKCIHRLDGCCYAIKK 288

Query: 417 NKVPITTLQARNMWLNEMQALAAVQPHPNIVGLY 518
           +K P+         +NE+ A A +  HP++V  Y
Sbjct: 289 SKKPVAGSAYERQAMNEVYAHAVLGKHPHVVRYY 322

>gb|AAD52983.1|AF123594_1 Wee1-like protein [Zea mays]
          Length = 403

 Score = 62.4 bits (150), Expect = 3e-09
 Identities = 48/194 (24%), Positives = 86/194 (43%), Gaps = 29/194 (14%)
 Frame = +3

Query: 15  DDDVSRSPAP-------SPRAMK-----RPRPLKVLPGNMDDEVS-------SQSQSQSR 137
           DDD    P P       +PR+ +      P+  +V   + D +++       ++  S+  
Sbjct: 19  DDDKENIPCPKSPEKSANPRSKRYRTDCSPKAREVTDFSFDHQITPVLFDSLTRDDSEEE 78

Query: 138 SVGEPSTCSKA--LSGRPPIPKLREVQPPMPRNPYLVRADDDNHVFQASQSC-------- 287
              +P+   +   +S      + R + PP  +NPYL      +      + C        
Sbjct: 79  QPKQPALEKRGGYVSQSAVALRCRVMPPPCVKNPYLNTDPCIDAAVYGGRQCNSAVFSPS 138

Query: 288 LNRGNYSRFLWDYHQEAELGHGNFSKVYKAVHRLTGIAYAVKTNKVPITTLQARNMWLNE 467
           +     SR+  D+H+  ++G+GNFS V+K ++R+ G  YAVK +   +     R   + E
Sbjct: 139 IGGNGLSRYRTDFHEIEKIGYGNFSVVFKVLNRIDGCLYAVKRSIKQLHNDMERRQAVKE 198

Query: 468 MQALAAVQPHPNIV 509
           +QA+AA+  H NIV
Sbjct: 199 VQAMAALGSHENIV 212

>gb|AAM34286.1|AF509327_1 putative cell cycle regulatory protein kinase  Wee1 [Oryza sativa]
          Length = 180

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = +3

Query: 306 SRFLWDYHQEAELGHGNFSKVYKAVHRLTGIAYAVKTNKVPITTLQARNMWLNEMQALAA 485
           SR+  D+H+  ++G+GNFS V+K ++R+ G  YA K +   +     R   + E+QA+AA
Sbjct: 34  SRYRTDFHEIEKIGYGNFSVVFKVLNRIDGCLYAAKRSIKQLHNDMERRQAVKEVQAMAA 93

Query: 486 VQPHPNIV 509
           +  H NIV
Sbjct: 94  LGSHENIV 101



EST assemble image


clone accession position
1 HCL075a04_r AV643731 1 263
2 LCL084d06_r AV630793 20 525
3 LCL084d05_r AV630792 20 489




Chlamydomonas reinhardtii
Kazusa DNA Research Institute