KCC002636A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002636A_C01 KCC002636A_c01
cggggctggcagcgctgcaatcgctgctgacgtgcctgcatgaggtggcggaGGGCATGG
CACACCTGCACTCCCTCAACATGATACACGGCGACCTGAAGCCCGGCAACGTACTGCTGA
CGTCGGACGAGTCCTCGCCGCTGGGCTACCAGTGCAAGGTGTCAGACTTTGGCCTGGCCA
CGGCGCTGGAGGCCAGCGAGCAGACCATCACTCACGAGAACTGGGGCACGGTGGTGTACA
TGGCGCCCGAGTCCTGCGCCGGCCGCTGCCGCAAGGCCTCGGACGTGTACTCGTTTGGTG
TGCTGCTGTGGCAGATGTGCACCGGGCAGCGCCCCTACGCCGGCCTGCATGCGGGGCAGG
TACTGCTCGGCGTCATAACCGGCACGCTCAAACTGCAGTGGCCGCCCTCGGCCAACAAGA
GCCTGGTCAACGTGGGGCAGGCCTGCATGCGCTTCGAGCCCAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002636A_C01 KCC002636A_c01
         (463 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_493187.1| dual Leucine zipper Kinase related (dlk-1) [Cae...    91  8e-18
pir||B87950 protein F33E2.2 [imported] - Caenorhabditis elegans        91  8e-18
ref|NP_171964.1| protein kinase family [Arabidopsis thaliana]          89  2e-17
ref|NP_181050.1| protein kinase family [Arabidopsis thaliana] gi...    88  4e-17
ref|NP_178075.1| protein kinase family [Arabidopsis thaliana] gi...    88  5e-17

>ref|NP_493187.1| dual Leucine zipper Kinase related (dlk-1) [Caenorhabditis elegans]
           gi|7500407|pir||T20082 hypothetical protein F33E2.2 -
           Caenorhabditis elegans gi|5824416|emb|CAA18635.2| C.
           elegans DLK-1 protein (corresponding sequence F33E2.2)
           [Caenorhabditis elegans] gi|5824486|emb|CAB06544.2| C.
           elegans DLK-1 protein (corresponding sequence F33E2.2)
           [Caenorhabditis elegans]
          Length = 855

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 52/137 (37%), Positives = 79/137 (56%), Gaps = 1/137 (0%)
 Frame = +3

Query: 42  EVAEGMAHLHSLNMIHGDLKPGNVLLTSDESSPLGYQCKVSDFGLATALEASEQTITHEN 221
           E+A+GM +LH   +IH DLK  N+L+++++S       K+ DFG +   +  + T+    
Sbjct: 156 EIADGMHYLHQNKVIHRDLKSPNILISAEDS------IKICDFGTSHMQKKMDSTMM-SF 208

Query: 222 WGTVVYMAPESCAGR-CRKASDVYSFGVLLWQMCTGQRPYAGLHAGQVLLGVITGTLKLQ 398
            GTV +MAPE    + C +  DVYSFGV+LW+M T + PYA +    ++ GV T  L L 
Sbjct: 209 CGTVSWMAPEMIKKQPCNEKVDVYSFGVVLWEMLTRETPYANIAQMAIIFGVGTNILSLP 268

Query: 399 WPPSANKSLVNVGQACM 449
            P  A K LV + + C+
Sbjct: 269 MPEEAPKGLVLLIKQCL 285

>pir||B87950 protein F33E2.2 [imported] - Caenorhabditis elegans
          Length = 848

 Score = 90.5 bits (223), Expect = 8e-18
 Identities = 52/137 (37%), Positives = 79/137 (56%), Gaps = 1/137 (0%)
 Frame = +3

Query: 42  EVAEGMAHLHSLNMIHGDLKPGNVLLTSDESSPLGYQCKVSDFGLATALEASEQTITHEN 221
           E+A+GM +LH   +IH DLK  N+L+++++S       K+ DFG +   +  + T+    
Sbjct: 156 EIADGMHYLHQNKVIHRDLKSPNILISAEDS------IKICDFGTSHMQKKMDSTMM-SF 208

Query: 222 WGTVVYMAPESCAGR-CRKASDVYSFGVLLWQMCTGQRPYAGLHAGQVLLGVITGTLKLQ 398
            GTV +MAPE    + C +  DVYSFGV+LW+M T + PYA +    ++ GV T  L L 
Sbjct: 209 CGTVSWMAPEMIKKQPCNEKVDVYSFGVVLWEMLTRETPYANIAQMAIIFGVGTNILSLP 268

Query: 399 WPPSANKSLVNVGQACM 449
            P  A K LV + + C+
Sbjct: 269 MPEEAPKGLVLLIKQCL 285

>ref|NP_171964.1| protein kinase family [Arabidopsis thaliana]
          Length = 1042

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
 Frame = +3

Query: 48   AEGMAHLHSLNMIHGDLKPGNVLLT-SDESSPLGYQCKVSDFGLATALEASEQTITHENW 224
            A GM +LH  N++H DLK  N+L+   D   P+   CKV DFGL+     +   ++    
Sbjct: 880  AFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPI---CKVGDFGLSRIKRNT--LVSGGVR 934

Query: 225  GTVVYMAPESCAGRCRKAS---DVYSFGVLLWQMCTGQRPYAGLHAGQVLLGVITGTLKL 395
            GT+ +MAPE   G   + S   DV+SFG+++W++ TG+ PYA LH G ++ G++  TL+ 
Sbjct: 935  GTLPWMAPELLNGSSNRVSEKVDVFSFGIVMWEILTGEEPYANLHCGAIIGGIVNNTLRP 994

Query: 396  QWPPSANKSLVNVGQACMRFEP 461
              P         + + C  F+P
Sbjct: 995  PVPERCEAEWRKLMEQCWSFDP 1016

>ref|NP_181050.1| protein kinase family [Arabidopsis thaliana] gi|7488331|pir||T00486
            serine/threonine-specific protein kinase homolog F19I3.28
            - Arabidopsis thaliana gi|3033400|gb|AAC12844.1| putative
            protein kinase [Arabidopsis thaliana]
          Length = 1257

 Score = 88.2 bits (217), Expect = 4e-17
 Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
 Frame = +3

Query: 42   EVAEGMAHLHSLNMIHGDLKPGNVLLT-SDESSPLGYQCKVSDFGLATALEASEQTITHE 218
            + A GM +LHS +++H DLK  N+L+   D + P+   CKV DFGL+     +   +T  
Sbjct: 1085 DAAFGMEYLHSKSIVHFDLKCDNLLVNLKDPARPI---CKVGDFGLSKIKRNT--LVTGG 1139

Query: 219  NWGTVVYMAPESCAGRCRKAS---DVYSFGVLLWQMCTGQRPYAGLHAGQVLLGVITGTL 389
              GT+ +MAPE  +G   K S   DV+SFG++LW++ TG+ PYA +H G ++ G++  TL
Sbjct: 1140 VRGTLPWMAPELLSGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1199

Query: 390  K 392
            +
Sbjct: 1200 R 1200

>ref|NP_178075.1| protein kinase family [Arabidopsis thaliana] gi|25406595|pir||B96827
            hypothetical protein T8K14.1 [imported] - Arabidopsis
            thaliana gi|4835752|gb|AAD30219.1|AC007202_1 Is a member
            of the PF|00069 Eukaryotic protein kinase family.  ESTs
            gb|T46484, gb|AF066875 and gb|N96237 come from this gene.
            [Arabidopsis thaliana]
          Length = 1248

 Score = 87.8 bits (216), Expect = 5e-17
 Identities = 49/121 (40%), Positives = 73/121 (59%), Gaps = 4/121 (3%)
 Frame = +3

Query: 42   EVAEGMAHLHSLNMIHGDLKPGNVLLT-SDESSPLGYQCKVSDFGLATALEASEQTITHE 218
            + A GM +LHS N +H DLK  N+L+   D S P+   CKV DFGL+     +   ++  
Sbjct: 1076 DAAFGMEYLHSKNTVHFDLKCDNLLVNLKDPSRPI---CKVGDFGLSKIKRNT--LVSGG 1130

Query: 219  NWGTVVYMAPESCAGRCRKAS---DVYSFGVLLWQMCTGQRPYAGLHAGQVLLGVITGTL 389
              GT+ +MAPE   G   K S   DV+SFG++LW++ TG+ PYA +H G ++ G++  TL
Sbjct: 1131 VRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTL 1190

Query: 390  K 392
            +
Sbjct: 1191 R 1191



EST assemble image


clone accession position
1 LCL002a01_r AV626072 1 424
2 HCL073a11_r AV643631 52 463




Chlamydomonas reinhardtii
Kazusa DNA Research Institute