Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002621A_C01 KCC002621A_c01
(644 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_043391.1| regulatory protein E2 [Human papillomavirus typ... 40 0.038
ref|NP_641686.1| conserved hypothetical protein [Xanthomonas axo... 36 0.55
ref|NP_041361.1| ORF E2 [Human papillomavirus type 47] gi|137682... 34 2.1
gb|AAA23802.1| folylpolyglutamate-dihydrofolate synthetase gi|14... 33 3.6
ref|NP_754744.1| FolC bifunctional protein; Folylpolyglutamate s... 33 3.6
>ref|NP_043391.1| regulatory protein E2 [Human papillomavirus type 36]
gi|1718125|sp|P50809|VE2_HPV36 REGULATORY PROTEIN E2
gi|1020222|gb|AAA79439.1| regulatory protein E2
Length = 509
Score = 39.7 bits (91), Expect = 0.038
Identities = 26/69 (37%), Positives = 38/69 (54%), Gaps = 3/69 (4%)
Frame = -1
Query: 341 RMSRSRSRTRSRATRGGPMIMLTQVKRTVLLSSGVSELAAEAK---TSKRCQRRLRRRSP 171
R SRSRSR++SR+ T+ + L +GV ++ ++ TS+R RR R RSP
Sbjct: 272 RSSRSRSRSQSRSHTPTTRSATTRSRSPSLAKTGVQRVSTRSRSRSTSRRGGRRRRSRSP 331
Query: 170 STTSRNLYT 144
ST+S T
Sbjct: 332 STSSSTTTT 340
>ref|NP_641686.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21107513|gb|AAM36222.1| conserved
hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 273
Score = 35.8 bits (81), Expect = 0.55
Identities = 30/94 (31%), Positives = 39/94 (40%), Gaps = 13/94 (13%)
Frame = +2
Query: 338 CGAFLTSSQGPFSVLCFLPGTAIRAVTQGNHTLSHGRLPEPHGSVGGRR---C------- 487
C + P SVLC+ PG RA L G + + G R+ C
Sbjct: 153 CAQLPLAHAEPLSVLCYAPGEQYRA---HRDYLPPGTIAADRPTAGNRQRTVCVYLNDVG 209
Query: 488 --GHTPAPVEPYR-RPRRQPLKPGTIVCDENIHA 580
G T P+ R RPR PGT+VC +N+HA
Sbjct: 210 AGGDTEFPIAGVRVRPR-----PGTLVCFDNLHA 238
>ref|NP_041361.1| ORF E2 [Human papillomavirus type 47] gi|137682|sp|P22420|VE2_HPV47
REGULATORY PROTEIN E2 gi|73406|pir||W2WL47 E2 protein -
human papillomavirus type 47 gi|333067|gb|AAA46979.1|
ORF E2 [Human papillomavirus type 47]
Length = 506
Score = 33.9 bits (76), Expect = 2.1
Identities = 29/90 (32%), Positives = 41/90 (45%)
Frame = -1
Query: 365 PVS*SRKPRMSRSRSRTRSRATRGGPMIMLTQVKRTVLLSSGVSELAAEAKTSKRCQRRL 186
P S +R+P+ + RSR+RSR+ T T ++ S + KT R + R
Sbjct: 254 PSSRTRRPQTHQRRSRSRSRSRSSSQ----THSSTTTTTTTYRSRSTSLNKTRARSRSRS 309
Query: 185 RRRSPSTTSRNLYTGYLGIVCVQRFQEPGS 96
RS STTSR G G QR + P +
Sbjct: 310 TSRSTSTTSRR---GGRGSSTRQRSRSPST 336
>gb|AAA23802.1| folylpolyglutamate-dihydrofolate synthetase
gi|146020|gb|AAA23808.1| folypolyglutamate
synthetase-dihydrofolate synthetase
Length = 422
Score = 33.1 bits (74), Expect = 3.6
Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Frame = +3
Query: 255 YSSLHL----------GQHYHWSAARGSAPRAATRPGHAGLS*LAHRALSAFCAFSQGQL 404
YSS HL GQ SA S + G L+ + LSA F Q QL
Sbjct: 81 YSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQL 140
Query: 405 SAQ*HRAITH*AMGGCLSRTEVSEVDVAVTPRRRSSRTGGRGGNRSNRGQ 554
I +GG L T + + DVAV T G +R + G+
Sbjct: 141 DV----VILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPDRESIGR 186
>ref|NP_754744.1| FolC bifunctional protein; Folylpolyglutamate synthase;
Dihydrofolate synthase [Escherichia coli CFT073]
gi|26109109|gb|AAN81312.1|AE016763_271 FolC bifunctional
protein; Folylpolyglutamate synthase; Dihydrofolate
synthase [Escherichia coli CFT073]
Length = 422
Score = 33.1 bits (74), Expect = 3.6
Identities = 32/110 (29%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Frame = +3
Query: 255 YSSLHL----------GQHYHWSAARGSAPRAATRPGHAGLS*LAHRALSAFCAFSQGQL 404
YSS HL GQ SA S + G L+ + LSA F Q QL
Sbjct: 81 YSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQL 140
Query: 405 SAQ*HRAITH*AMGGCLSRTEVSEVDVAVTPRRRSSRTGGRGGNRSNRGQ 554
I +GG L T + + DVAV T G +R + G+
Sbjct: 141 DV----VILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPDRESIGR 186
