Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002570A_C01 KCC002570A_c01
(459 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 46 2e-04
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 46 2e-04
ref|NP_628967.1| conserved hypothetical protein SCD63A.21c [Stre... 45 3e-04
ref|ZP_00136439.1| COG0642: Signal transduction histidine kinase... 45 3e-04
ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty ... 45 4e-04
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive
matrix protein 1 [Rattus norvegicus]
Length = 958
Score = 45.8 bits (107), Expect = 2e-04
Identities = 32/88 (36%), Positives = 41/88 (46%)
Frame = -1
Query: 420 APAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCSCCP 241
+P+ PPARRR SP P PP RRR +P PP R R + P
Sbjct: 597 SPSPPPARRRRSPSPAPPPPP----------PPPPRRRRSPTPPPRRR--------TPSP 638
Query: 240 PPSRQSPRPRSHGSSAAGEQRVAPLGRP 157
PP R+SP PR + S ++R +P P
Sbjct: 639 PPRRRSPSPRRY--SPPIQRRYSPSPPP 664
Score = 40.4 bits (93), Expect = 0.009
Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Frame = -1
Query: 441 AEASRCPAPAGPP-------ARRRPSPHPR----SPPTATRYQRAVRRRQQLRRRRSNPA 295
A R P+PA PP RR P+P PR SPP R R ++RR S
Sbjct: 603 ARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSP 662
Query: 294 PPHRLRWRRRWQLCSCCPPPSRQ---SPRPRSHGS-SAAGEQRVAPL 166
PP R + S PPP R+ SP P+ S S +QR P+
Sbjct: 663 PPKR-------RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPV 702
Score = 37.0 bits (84), Expect = 0.10
Identities = 29/88 (32%), Positives = 36/88 (39%), Gaps = 5/88 (5%)
Frame = -1
Query: 408 PPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRS-----NPAPPHRLRWRRRWQLCSCC 244
P PSP R T+ R +R RRRRS P PP R RR S
Sbjct: 574 PSRSASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPRRRR-----SPT 628
Query: 243 PPPSRQSPRPRSHGSSAAGEQRVAPLGR 160
PPP R++P P S + + P+ R
Sbjct: 629 PPPRRRTPSPPPRRRSPSPRRYSPPIQR 656
Score = 34.7 bits (78), Expect = 0.52
Identities = 23/87 (26%), Positives = 32/87 (36%)
Frame = -1
Query: 429 RCPAPAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCS 250
+ P P P + PSP S + + R R + R R + +P H RR
Sbjct: 305 KAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSR 364
Query: 249 CCPPPSRQSPRPRSHGSSAAGEQRVAP 169
P R SPR R +R+ P
Sbjct: 365 SYSPRRRPSPRRRPSPRRRTPPRRMPP 391
Score = 34.3 bits (77), Expect = 0.68
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = -1
Query: 408 PPARRRPSPHPRS---PPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCSCCPP 238
P +R R R+ P+ TR +R R R + R P+P R RRR P
Sbjct: 333 PRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRR-------TP 385
Query: 237 PSRQSPRPRSHGSSAAGEQR 178
P R P PR S + G +R
Sbjct: 386 PRRMPPPPRHRRSRSPGRRR 405
Score = 32.3 bits (72), Expect = 2.6
Identities = 33/108 (30%), Positives = 40/108 (36%), Gaps = 17/108 (15%)
Frame = -1
Query: 429 RCPAPAGPPARRRPSPHP-------RSPPTATRYQRAVRRRQQ--LRRRRSNPAPPHRLR 277
R A PP +RR SP P SPP R +RR + R +P R
Sbjct: 666 RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTR 725
Query: 276 WRRRWQLCSCCPP------PSRQSPRPRSHGSSAA--GEQRVAPLGRP 157
R Q P P SP P G+SA+ G Q +P RP
Sbjct: 726 EARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRP 773
Score = 30.8 bits (68), Expect = 7.5
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 14/77 (18%)
Frame = +1
Query: 157 GSAQRRHALLPSGAASV*PRARRLA--------------GRRRAARAQLPSPPPPQAMRR 294
G RR PS +AS PR R+ RRR + + P PPPP RR
Sbjct: 564 GEVGRRRRHSPSRSASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPRR 623
Query: 295 RWV*PAAPELLPPAHSP 345
R P P+ P
Sbjct: 624 RRSPTPPPRRRTPSPPP 640
Score = 30.4 bits (67), Expect = 9.8
Identities = 22/80 (27%), Positives = 30/80 (37%)
Frame = -1
Query: 408 PPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCSCCPPPSR 229
PP ++P SPP TR + R R S+PA P PP +R
Sbjct: 427 PP--KKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATP---------------PPKTR 469
Query: 228 QSPRPRSHGSSAAGEQRVAP 169
SP P+ + V+P
Sbjct: 470 HSPTPQQSNRARKSRVSVSP 489
Score = 30.4 bits (67), Expect = 9.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 429 RCPAPAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAP 292
R A PP RR P +PP TR+ ++ + R+ R + +P
Sbjct: 444 RLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNRARKSRVSVSP 489
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 45.8 bits (107), Expect = 2e-04
Identities = 32/88 (36%), Positives = 41/88 (46%)
Frame = -1
Query: 420 APAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCSCCP 241
+P+ PPARRR SP P PP RRR +P PP R R + P
Sbjct: 561 SPSPPPARRRRSPSPAPPPPPP---------PPPPRRRRSPTPPPRRR--------TPSP 603
Query: 240 PPSRQSPRPRSHGSSAAGEQRVAPLGRP 157
PP R+SP PR + S ++R +P P
Sbjct: 604 PPRRRSPSPRRY--SPPIQRRYSPSPPP 629
Score = 39.7 bits (91), Expect = 0.016
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Frame = -1
Query: 441 AEASRCPAPAGPP--------ARRRPSPHPR----SPPTATRYQRAVRRRQQLRRRRSNP 298
A R P+PA PP RR P+P PR SPP R R ++RR S
Sbjct: 567 ARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPS 626
Query: 297 APPHRLRWRRRWQLCSCCPPPSRQ---SPRPRSHGSSAAGEQRVAP 169
PP R + S PPP R+ SP P+ S + ++ +P
Sbjct: 627 PPPKR-------RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSP 665
Score = 37.0 bits (84), Expect = 0.10
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = -1
Query: 408 PPARRRPSPHPRSPPTATRYQRAVRRRQQL---RRRRSNPAPPHRLRWRRRWQLCSCCPP 238
P PSP R T+ R Q R + + RRR +P+PP RR + S PP
Sbjct: 523 PSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPP----ARRRRSPSPAPP 578
Query: 237 PSRQSPRPRSHGSSAAGEQRVAPLGRP 157
P P PR S +R P P
Sbjct: 579 PPPPPPPPRRRRSPTPPPRRRTPSPPP 605
Score = 35.4 bits (80), Expect = 0.31
Identities = 24/95 (25%), Positives = 35/95 (36%)
Frame = -1
Query: 453 AACCAEASRCPAPAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRW 274
A ++ + P P P + PSP S + + R R + R R + +P H
Sbjct: 238 ATSTSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPR 297
Query: 273 RRRWQLCSCCPPPSRQSPRPRSHGSSAAGEQRVAP 169
RR P R SPR R +R+ P
Sbjct: 298 RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPP 332
Score = 33.1 bits (74), Expect = 1.5
Identities = 28/71 (39%), Positives = 30/71 (41%), Gaps = 12/71 (16%)
Frame = +1
Query: 157 GSAQRRHALLPSGAASV*PRARRLAGRRR---AARAQLP---------SPPPPQAMRRRW 300
G RR L PS +AS PR R+ R R Q P SP PP A RRR
Sbjct: 513 GEVGRRRRLSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRRRS 572
Query: 301 V*PAAPELLPP 333
PA P PP
Sbjct: 573 PSPAPPPPPPP 583
Score = 32.7 bits (73), Expect = 2.0
Identities = 33/108 (30%), Positives = 40/108 (36%), Gaps = 17/108 (15%)
Frame = -1
Query: 429 RCPAPAGPPARRRPSPHP-------RSPPTATRYQRAVRRRQQ--LRRRRSNPAPPHRLR 277
R A PP +RR SP P SPP R +RR + R +P R
Sbjct: 631 RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRSPSLSSKHRKGSSPGRSTR 690
Query: 276 WRRRWQLCSCCPP------PSRQSPRPRSHGSSAA--GEQRVAPLGRP 157
R Q P P SP P G+SA+ G Q +P RP
Sbjct: 691 EARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPSTRP 738
Score = 30.4 bits (67), Expect = 9.8
Identities = 22/80 (27%), Positives = 30/80 (37%)
Frame = -1
Query: 408 PPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCSCCPPPSR 229
PP ++P SPP TR + R R S+PA P PP +R
Sbjct: 368 PP--KKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATP---------------PPKTR 410
Query: 228 QSPRPRSHGSSAAGEQRVAP 169
SP P+ + V+P
Sbjct: 411 HSPTPQQSNRTRKSRVSVSP 430
Score = 30.4 bits (67), Expect = 9.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 429 RCPAPAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAP 292
R A PP RR P +PP TR+ ++ + R+ R + +P
Sbjct: 385 RLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNRTRKSRVSVSP 430
>ref|NP_628967.1| conserved hypothetical protein SCD63A.21c [Streptomyces coelicolor
A3(2)] gi|8218211|emb|CAB92673.1| conserved hypothetical
protein SCD63A.21c [Streptomyces coelicolor A3(2)]
Length = 342
Score = 45.4 bits (106), Expect = 3e-04
Identities = 28/64 (43%), Positives = 34/64 (52%)
Frame = +1
Query: 199 ASV*PRARRLAGRRRAARAQLPSPPPPQAMRRRWV*PAAPELLPPAHSPLITRGGGRRAR 378
AS A RL R A A+LP+ PQ + RR A+ E L A P + RGG RRAR
Sbjct: 206 ASTPAAANRLLHAREAVAARLPALADPQVLHRRLAELASNERLRAAEPPAVRRGGERRAR 265
Query: 379 MR*R 390
+R R
Sbjct: 266 LRTR 269
>ref|ZP_00136439.1| COG0642: Signal transduction histidine kinase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 703
Score = 45.4 bits (106), Expect = 3e-04
Identities = 49/130 (37%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Frame = -1
Query: 438 EASRCPAPAGPPARRRPSPHPRSPPTATR-----YQRAVRRRQQLRRRRSNPAPPHRLRW 274
E R PA PP RRPS R P ++R Y R RRR+QLR RR HRL
Sbjct: 19 ENRRPPASPEPPMARRPSTASR-PAHSSRDPGHAYPRT-RRRRQLRSRRHR----HRLPR 72
Query: 273 RRRWQLCSCCPPPSRQSPRPRSH------GSSAAGEQRVAPLGRPALLSGADCELTVARP 112
RR L S P R P R G AA QR A L A AD RP
Sbjct: 73 GRRGGLRSRPRRPGRPQPGARQPLRRDPAGHHAAAHQRPAGLSPAARSRPADPGTHAHRP 132
Query: 111 AFRTAVLRRL 82
+ RRL
Sbjct: 133 GYPAGQARRL 142
Score = 38.5 bits (88), Expect = 0.036
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -1
Query: 441 AEASRCPAPAGPPARRRPSP-HPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRR 265
A+A R AGPPA +P+P P P R R+ RR + A PHRL R
Sbjct: 151 AQALRTAGAAGPPASPQPAPQRPGPAPAGRRPGDGPRQPPGQPRRHAPGAVPHRLEDPR- 209
Query: 264 WQLCSCCPPPSRQSPRPRSHGSSAAGEQRVAPLGRPA 154
P +RQ PR+ AAG QR LGR A
Sbjct: 210 -------VPDARQ---PRAGHPRAAGAQR---LGRRA 233
>ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty of prolines 101-l;
Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-like) [Homo sapiens]
gi|3005587|gb|AAC09321.1| Ser/Arg-related nuclear matrix
protein [Homo sapiens]
gi|33150824|gb|AAP97290.1|AF419855_1 Ser/Arg-related
nuclear matrix protein [Homo sapiens]
Length = 820
Score = 45.1 bits (105), Expect = 4e-04
Identities = 31/88 (35%), Positives = 39/88 (44%)
Frame = -1
Query: 420 APAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQLCSCCP 241
+P+ PP RRR SP P PP RRR P PP R R + P
Sbjct: 547 SPSPPPTRRRRSPSPAPPP----------------RRRRTPTPPPRRR--------TPSP 582
Query: 240 PPSRQSPRPRSHGSSAAGEQRVAPLGRP 157
PP R+SP PR + S ++R +P P
Sbjct: 583 PPRRRSPSPRRY--SPPIQRRYSPSPPP 608
Score = 45.1 bits (105), Expect = 4e-04
Identities = 34/95 (35%), Positives = 44/95 (45%), Gaps = 18/95 (18%)
Frame = -1
Query: 429 RCPAPAGPPARRR----------PSPHP-RSPPTATRYQRAVRRRQQ----LRRRRSNPA 295
R P+PA PP RRR PSP P R P+ RY ++RR +RR ++P
Sbjct: 557 RSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPP 616
Query: 294 PPHRLRWRRRWQLCSCCPPPSRQ---SPRPRSHGS 199
PP + R S PPP R+ SP P+ S
Sbjct: 617 PPPKRR-------ASPSPPPKRRVSHSPPPKQRSS 644
Score = 34.7 bits (78), Expect = 0.52
Identities = 23/54 (42%), Positives = 27/54 (49%)
Frame = +1
Query: 157 GSAQRRHALLPSGAASV*PRARRLAGRRRAARAQLPSPPPPQAMRRRWV*PAAP 318
G RR PS +AS PR R+ R R + PSPPP + RRR PA P
Sbjct: 513 GEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTR--RRRSPSPAPP 564
Score = 34.3 bits (77), Expect = 0.68
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = -1
Query: 399 RRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLR---------WRRRWQLCSC 247
RRR SP + P+ + Q+ R RRRRS PP R R RRR +
Sbjct: 518 RRRHSPSRSASPSPRKRQKETSPRG--RRRRSPSPPPTRRRRSPSPAPPPRRRR----TP 571
Query: 246 CPPPSRQSPRPRSHGSSAAGEQRVAPLGR 160
PPP R++P P S + + P+ R
Sbjct: 572 TPPPRRRTPSPPPRRRSPSPRRYSPPIQR 600
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = -1
Query: 453 AACCAEASRCPAPAGPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRR-RSNPAPPHRLR 277
A ++ + P P P + PSP S + + R R + + R R+ P R
Sbjct: 238 ATSTSDILKVPKPEPIPEPKEPSPEKNSKKEQEKEKTRPRSRSRSKSRSRTRSRSPSHTR 297
Query: 276 WRRRWQLCSCCPPPSRQSPRPRSHGSSAAGEQRVAP 169
RRR + P R SPR R +R+ P
Sbjct: 298 PRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMPP 333
Score = 33.1 bits (74), Expect = 1.5
Identities = 26/86 (30%), Positives = 38/86 (43%), Gaps = 2/86 (2%)
Frame = -1
Query: 429 RCPAPA--GPPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPPHRLRWRRRWQL 256
R P+P PP +RR SP P PP +R +RR++P+PP + R +
Sbjct: 587 RSPSPRRYSPPIQRRYSPSP--PP-----KRRTASPPPPPKRRASPSPPPKRR------V 633
Query: 255 CSCCPPPSRQSPRPRSHGSSAAGEQR 178
PP R SP + S + + R
Sbjct: 634 SHSPPPKQRSSPVTKRRSPSLSSKHR 659
Score = 32.7 bits (73), Expect = 2.0
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Frame = -1
Query: 408 PPARRRPSPHPRSPPTATRYQRAVRRRQQLRRRRSNPAPP----HRLRWRRRWQLCSCCP 241
P R PSP PR+P T++ R +RR +P+P R+ +
Sbjct: 676 PNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAA 735
Query: 240 PPSRQSPRPRSHGSSAAGEQRVAPLGRPA 154
PS QS R S S +G A PA
Sbjct: 736 SPSPQSVRRVSSSRSVSGSPEPAAKKPPA 764
Score = 32.0 bits (71), Expect = 3.4
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 37/117 (31%)
Frame = -1
Query: 408 PPARRRPSPHPRSP----PTATRYQRA---VRRRQQ-------------LRRRRSNP--- 298
P RRRPSP R+P P R++R+ VRRR++ R RS P
Sbjct: 314 PSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 373
Query: 297 -----APPHRLR---------WRRRWQLCSCCPPPSRQSPRPRSHGSSAAGEQRVAP 169
+PP + R RR PP +R SP P+ + V+P
Sbjct: 374 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPKTRDSPTPQQSNRTRKSRVSVSP 430
Score = 30.8 bits (68), Expect = 7.5
Identities = 27/92 (29%), Positives = 38/92 (40%), Gaps = 12/92 (13%)
Frame = -1
Query: 429 RCPAPAGPPARRRPSPHP-------RSPPTATRYQRAVRRRQQ--LRRRRSNPAPPHRLR 277
R A PP +RR SP P SPP R +RR + R +P R
Sbjct: 610 RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTR 669
Query: 276 WRRRWQLCSCCPPPSRQ---SPRPRSHGSSAA 190
R P P+++ SPRPR+ +S++
Sbjct: 670 EAR-------SPQPNKRHSPSPRPRAPQTSSS 694
