KCC002568A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002568A_C01 KCC002568A_c01
gaagttccacatacgatagaaatgGCTTCGCTCGCTCAGCGCGTGAGCGTTCCGCTGGGC
GTCACTTCCCGGCGGCCTGCTGTGGCCCCTGTGGCGCTGCTGGGCGCTCTGCCGGTCCGG
CCTTCGCAGGTCTCCGTTGGCTCGCGCCTGGCAGTGAAGCCGGTTGCGCCGGTCCGTGCT
CGCCAGACCCTTGTTACCAAGGCTTCTGCCGCGGATGCCCCCAAGGAGCTCGATGCGCTT
GAGACGACTGTCTCCAAGGTCGTTGGCGCAAAGCTGGCGCCTACTGTGGTCACGCTGAGC
TTCATTACCATCTGGTACGCCCTGAACATCGGCTTCAACCTGCTGAACAAGACCATCTTC
AAGTACTTCCCCTACCCCTACACCGTGTCCACCATCCACGTGGTGGTCGGCCTGGTCTAC
TGCGTGCTCGTGTACGCCGTGGGCCTCAAGACCTGGTCCTTCGGCCGCCCCGTGACCAAG
CAGGAGTTCAAGAACATCTTCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002568A_C01 KCC002568A_c01
         (503 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK27373.1| triose phosphate/phosphate translocator [Oryza sa...    82  4e-15
sp|P49133|CPTR_MAIZE TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CH...    80  1e-14
dbj|BAB17213.1| putative triose phosphate/phosphate translocator...    79  2e-14
gb|AAK01174.2|AF314182_1 triose phosphate translocator [Triticum...    79  2e-14
gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator...    79  4e-14

>gb|AAK27373.1| triose phosphate/phosphate translocator [Oryza sativa]
          Length = 417

 Score = 82.0 bits (201), Expect = 4e-15
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +1

Query: 73  RPAVAPVALLGAL--PVRPSQVSVGSRLAVKPVAPVRARQTLVTKASAADAPKELDALET 246
           RPA+   A  G L  P  PS    G R A++P A           A+ +   K    LE 
Sbjct: 62  RPALLLPAAGGLLQPPTSPSSSQAGRRQALRPPA-----------AATSGEAKPAGFLEK 110

Query: 247 TVSKVVGAKLAPTVVTLSFITIWYALNIGFNLLNKTIFKYFPYPYTVSTIHVVVGLVYCV 426
                      P ++T  F  +WY LN+ FN+LNK I+ YFPYPY VS IH++VG+VYC+
Sbjct: 111 Y----------PALITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCL 160

Query: 427 LVYAVGL 447
           L +AVGL
Sbjct: 161 LSWAVGL 167

>sp|P49133|CPTR_MAIZE TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLAST PRECURSOR
           (CTPT) gi|480909|pir||S37497 triose
           phosphate/3-phosphoglycerate/phosphate translocator -
           maize gi|405635|emb|CAA81349.1| triose
           phosphate/phosphate translocator [Zea mays]
          Length = 409

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +1

Query: 151 AVKPVAPVRARQTLVTKASAADAPKELDALETTVSKVVG-AKLAPTVVTLSFITIWYALN 327
           A+ P      R TL   A+AA++  E        +K VG  +  P +VT  F  +WY LN
Sbjct: 68  ALLPSLQPARRHTLQPPAAAAESAGE--------AKSVGFLEKYPALVTGFFFFMWYFLN 119

Query: 328 IGFNLLNKTIFKYFPYPYTVSTIHVVVGLVYCVLVYAVGL 447
           + FN+LNK I+ YFPYPY VS IH+VVG+VYC++ ++VGL
Sbjct: 120 VIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGL 159

>dbj|BAB17213.1| putative triose phosphate/phosphate translocator [Oryza sativa
           (japonica cultivar-group)] gi|13486862|dbj|BAB40092.1|
           putative triose phosphate/phosphate translocator [Oryza
           sativa (japonica cultivar-group)]
          Length = 417

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
 Frame = +1

Query: 73  RPAVAPVALLGAL--PVRPSQVSVGSRLAVKPVAPVRARQTLVTKASAADAPKELDALET 246
           RPA+   A  G L  P  PS    G R A++P A           A+ +   K    LE 
Sbjct: 62  RPALLLPAAGGLLQPPTSPSSSQAGRRQALRPPA-----------AATSGEAKPAGFLEK 110

Query: 247 TVSKVVGAKLAPTVVTLSFITIWYALNIGFNLLNKTIFKYFPYPYTVSTIHVVVGLVYCV 426
                      P ++T  F  +WY LN+ FN+LNK I+ YFPYPY VS IH++VG+VYC+
Sbjct: 111 Y----------PALITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCL 160

Query: 427 LVYAVGL 447
           + + VGL
Sbjct: 161 VSWTVGL 167

>gb|AAK01174.2|AF314182_1 triose phosphate translocator [Triticum aestivum]
          Length = 402

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 51/133 (38%), Positives = 72/133 (53%), Gaps = 1/133 (0%)
 Frame = +1

Query: 52  PLGVTSRRPAVAPVA-LLGALPVRPSQVSVGSRLAVKPVAPVRARQTLVTKASAADAPKE 228
           PL   +R  AV   A L+    +RP+ V     L      P++A + L  +  AA A   
Sbjct: 31  PLPAAARAGAVHDGAQLVWGRQLRPALVLPAGLL------PLQASKRLTLRPPAASAEPA 84

Query: 229 LDALETTVSKVVGAKLAPTVVTLSFITIWYALNIGFNLLNKTIFKYFPYPYTVSTIHVVV 408
            +A    + +       P + T  F  +WY LN+ FN+LNK I+ YFPYPY VS IH++V
Sbjct: 85  GEAKSPGLLEKY-----PAITTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLV 139

Query: 409 GLVYCVLVYAVGL 447
           G+VYC+L +AVGL
Sbjct: 140 GVVYCLLSWAVGL 152

>gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator precursor [Mesembryanthemum
           crystallinum]
          Length = 404

 Score = 78.6 bits (192), Expect = 4e-14
 Identities = 53/149 (35%), Positives = 75/149 (49%), Gaps = 9/149 (6%)
 Frame = +1

Query: 28  SLAQRVSVPLGVTSRRPAVAPV---------ALLGALPVRPSQVSVGSRLAVKPVAPVRA 180
           S  +R +  LG+ + +P  A            L   L + P Q    SR     V P RA
Sbjct: 19  SRPRREAASLGIAAVKPVGAVKDGGNLIWGRQLRPVLLLEPVQTGPVSRKESTAVQPCRA 78

Query: 181 RQTLVTKASAADAPKELDALETTVSKVVGAKLAPTVVTLSFITIWYALNIGFNLLNKTIF 360
                  A  +D+  E        +KV   +  P +VT  F  +WY LN+ FN+LNK I+
Sbjct: 79  A------AEGSDSAGE--------AKVGFLQKYPALVTGFFFFMWYFLNVIFNILNKKIY 124

Query: 361 KYFPYPYTVSTIHVVVGLVYCVLVYAVGL 447
            YFPYPY VS IH++VG++YC++ +AVGL
Sbjct: 125 NYFPYPYFVSVIHLLVGVIYCLVSWAVGL 153



EST assemble image


clone accession position
1 HCL061a12_r AV642949 1 503
2 MXL046a02_r BP095697 25 427




Chlamydomonas reinhardtii
Kazusa DNA Research Institute