KCC002562A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002562A_C01 KCC002562A_c01
TGCACGTGCCCAAGTTCGAGGTCAAGCCCGGCCAGGTCGTTGCTGTGGTGGGCCGCATCG
CCGCCGGCAAGTCGTCCCTGGTGCAGGCCATCCTCGGCAACATGGTCAAGGAGCACGGCA
GCTTCAACGTGGGCGGCCGCATCTCCTACGTGCCGCAGAACCCCTGGCTGCAGAACCTGT
CCCTGCGTGACAACGTGCTGTTTGGCGAGCAGTTCGATGAGAACAAGTACACCGACGTCA
TCGAGTCCTGCGCCCTGACCCTGGACCTGCAGATCCTGTCCAACGGTGACCAGTCCAAGG
CCGGCATCCGCGGTGTCAACTTCTCCGGTGGCCAGCGCCAGCGCGTGAACCTGGCCCGCT
GCGCCTACGCCGACGCCGACCTGGTGCTGCTCGACAACGCCCTGTCCGCCGTGGACCACC
ACACCGTCCACCACATCTTCGACAAGTGCATCAAGGGCCTGTTCTCCGACAAGGCCGTGG
TGCTGGTCACCCACCAGATCGAGTTCATGCCCCGCTGCGACAACGTGGCCATCATGGACG
AGGGCCGCTGCCTGTACTTCGGCAAGTGGAACGAGGAGGCCCAGCACCTGCTCGGCAAGC
TGCTGCCCATCACCCACCTGCTGCACGCCGCCGGCTCCCAGGAGGCTCCCCCCGCCCCCA
AGAAGAAGGCCGAGGACAAGGCCGGCCCCCAGAAGTCGCAGTCGCTGCAGCTGACCCTGG
CCCCCACCTCCATCGGCAAGCCCACCGAGAAGCCCAAGGACGTCCAGAAGCTGACTGCCT
ACCAGGCCGCCCTCATCTACACCTGGTACGGCAACCTGTTCCTGGTTGGCGTGTGCTTCT
TCTTCTTCCTGGCGGCTCAGTGCTCTCGCCAGATCTCCGATTTCTGGGTGCGCTGGTGGG
TGAACGACGAGTACAAGAAGTTCCCCGTGAAGGGCGAGCAGGACTCGGCCGCCACCACCT
TCTACTGCCTCATCTACCTGCTGCTGGTGGGCCTGTTCTACATCTTCATGATCTTCCGCG
GCGCCACTTTCCTGTGGTGGGTGCTCAAGTCCTCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002562A_C01 KCC002562A_c01
         (1056 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL35383.1|AF442557_1 putative ABC transporter [Chlamydomonas...   718  0.0
ref|NP_610079.2| CG9270-PA [Drosophila melanogaster] gi|22946960...   206  4e-52
gb|AAQ22531.1| LD15381p [Drosophila melanogaster]                     206  4e-52
gb|AAL85706.1|AF474335_1 ABC transporter ABCC.3 [Dictyostelium d...   202  1e-50
ref|NP_038818.1| ATP-binding cassette, sub-family C, member 5; A...   200  4e-50

>gb|AAL35383.1|AF442557_1 putative ABC transporter [Chlamydomonas reinhardtii]
          Length = 1082

 Score =  718 bits (1854), Expect = 0.0
 Identities = 350/351 (99%), Positives = 350/351 (99%)
 Frame = +3

Query: 3    HVPKFEVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLS 182
            HVPKFEVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLS
Sbjct: 192  HVPKFEVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLS 251

Query: 183  LRDNVLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARC 362
            LRDNVLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARC
Sbjct: 252  LRDNVLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARC 311

Query: 363  AYADADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDE 542
            AYADADLVLLDNALSAVDHHT HHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDE
Sbjct: 312  AYADADLVLLDNALSAVDHHTAHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDE 371

Query: 543  GRCLYFGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLA 722
            GRCLYFGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLA
Sbjct: 372  GRCLYFGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLA 431

Query: 723  PTSIGKPTEKPKDVQKLTAYQAALIYTWYGNLFLVGVCFFFFLAAQCSRQISDFWVRWWV 902
            PTSIGKPTEKPKDVQKLTAYQAALIYTWYGNLFLVGVCFFFFLAAQCSRQISDFWVRWWV
Sbjct: 432  PTSIGKPTEKPKDVQKLTAYQAALIYTWYGNLFLVGVCFFFFLAAQCSRQISDFWVRWWV 491

Query: 903  NDEYKKFPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLWWVLKSS 1055
            NDEYKKFPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLWWVLKSS
Sbjct: 492  NDEYKKFPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLWWVLKSS 542

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
 Frame = +3

Query: 15   FEVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGG-------------RISYVP 155
            F++  G+ V  VGR  +GKS+ + A+        G   V G              +S +P
Sbjct: 841  FKINDGEKVGAVGRTGSGKSTTLLALYRMFELGKGRILVDGVDIATLSLKRLRTGLSIIP 900

Query: 156  QNPWLQNLSLRDNV-LFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGG 332
            Q P +   ++R N+  FGE  D+    +V++   L    Q     D    G  G  +S G
Sbjct: 901  QEPVMFTGTVRSNLDPFGEFKDDAILWEVLKKVGLEDQAQHAGGLDGQVDGTGGKAWSLG 960

Query: 333  QRQRVNLARCAYADADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMP 512
            Q Q V LAR A     ++ LD A +A+D HT   I  + IK +F D+  + + H+++ + 
Sbjct: 961  QMQLVCLARAALRAVPILCLDEATAAMDPHT-EAIVQQTIKKVFDDRTTITIAHRLDTII 1019

Query: 513  RCDNVAIMDEGRCLYFGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAED 677
              D + +M++G  + +    E    LL     +   L       A  A +K AED
Sbjct: 1020 ESDKIIVMEQGSLMEY----ESPSKLLANRDSMFSKLVDKTGPAAAAALRKMAED 1070

>ref|NP_610079.2| CG9270-PA [Drosophila melanogaster] gi|22946960|gb|AAF53950.2|
            CG9270-PA [Drosophila melanogaster]
          Length = 1145

 Score =  206 bits (525), Expect = 4e-52
 Identities = 129/358 (36%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
 Frame = +3

Query: 21   VKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLSLRDNVL 200
            + P Q+VAV+G + +GKSSL+QAILG +  E G   V G ISY  Q PWL N S+RDN+L
Sbjct: 290  LSPPQLVAVIGPVGSGKSSLIQAILGELPGESGKLKVQGDISYASQEPWLFNASVRDNIL 349

Query: 201  FGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARCAYADAD 380
            FG   D+++Y +VI +CAL  D ++L +GD++  G RG + SGGQR R++LAR  Y  AD
Sbjct: 350  FGLPMDKHRYRNVIRNCALERDFELL-HGDRTFVGERGASLSGGQRARISLARAVYRQAD 408

Query: 381  LVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDEGRCLYF 560
              LLD+ LSAVD H   H+F++C++G   DK V+LVTHQ++F+   D + IMD+G+    
Sbjct: 409  TYLLDDPLSAVDTHVGRHLFEECMRGFLRDKLVILVTHQLQFLEHADLIVIMDKGKISAV 468

Query: 561  GKWNE--EAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLAPTSI 734
            G + E  ++    GKLL          +QE   A      DK+   +  S    ++ TS+
Sbjct: 469  GTYEEMLKSGQDFGKLLATEAQEMGDSNQEQVNAEGDSRNDKSTYSRQSSRVSRVSVTSV 528

Query: 735  GKPTEKPKDVQKLTAY----QAALIYTWYGNLFLVG-------VCFFFFLAAQCSRQISD 881
               TE   D ++  A     Q  +    YG  F  G       +  FF L  Q      D
Sbjct: 529  DSSTESILDNERQPAQESRSQGKIGLGIYGKYFSAGSGWLMVILVAFFCLGTQILASGGD 588

Query: 882  FWVRWWVNDEYKKFPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLWWVLKSS 1055
            +++ +W         VK    S++T  Y  I+  +     IF + R   F    + SS
Sbjct: 589  YFLSYW---------VKNNDSSSSTDIY--IFSGINAALVIFALLRTLLFFSMAMHSS 635

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
 Frame = +3

Query: 15   FEVKPGQVVAVVGRIAAGKSSLVQAIL------GNMVKEH------GSFNVGGRISYVPQ 158
            F + P + + +VGR  AGKSSL+ A+       G++V ++      G  ++  +IS +PQ
Sbjct: 908  FIIMPREKIGIVGRTGAGKSSLINALFRLSYNEGSLVIDNTDILGIGLHDLRSKISIIPQ 967

Query: 159  NPWLQNLSLRDNVLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQR 338
             P L + +LR N+   EQ+ + K  + +E   L  ++  L NG +S     G N+S GQR
Sbjct: 968  EPVLFSGTLRCNLDPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQR 1027

Query: 339  QRVNLARCAYADADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRC 518
            Q V LAR    +  ++++D A + VD  T   +    I+  F D  V+ + H++  +   
Sbjct: 1028 QLVCLARAILRENRILVMDEATANVDPQT-DALIQSTIRRKFRDCTVLTIAHRLNTIIDS 1086

Query: 519  DNVAIMDEGRCLYFG 563
            D V ++D G  + FG
Sbjct: 1087 DRVMVLDAGTLVEFG 1101

>gb|AAQ22531.1| LD15381p [Drosophila melanogaster]
          Length = 1145

 Score =  206 bits (525), Expect = 4e-52
 Identities = 129/358 (36%), Positives = 187/358 (52%), Gaps = 13/358 (3%)
 Frame = +3

Query: 21   VKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLSLRDNVL 200
            + P Q+VAV+G + +GKSSL+QAILG +  E G   V G ISY  Q PWL N S+RDN+L
Sbjct: 290  LSPPQLVAVIGPVGSGKSSLIQAILGELPGESGKLKVQGDISYASQEPWLFNASVRDNIL 349

Query: 201  FGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARCAYADAD 380
            FG   D+++Y +VI +CAL  D ++L +GD++  G RG + SGGQR R++LAR  Y  AD
Sbjct: 350  FGLPMDKHRYRNVIRNCALERDFELL-HGDRTFVGERGASLSGGQRARISLARAVYRQAD 408

Query: 381  LVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDEGRCLYF 560
              LLD+ LSAVD H   H+F++C++G   DK V+LVTHQ++F+   D + IMD+G+    
Sbjct: 409  TYLLDDPLSAVDTHVGRHLFEECMRGFLRDKLVILVTHQLQFLEHADLIVIMDKGKISAV 468

Query: 561  GKWNE--EAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLAPTSI 734
            G + E  ++    GKLL          +QE   A      DK+   +  S    ++ TS+
Sbjct: 469  GTYEEMLKSGQDFGKLLATEAQEMGDSNQEQVNAEGDSRNDKSTYSRQSSRVSRVSVTSV 528

Query: 735  GKPTEKPKDVQKLTAY----QAALIYTWYGNLFLVG-------VCFFFFLAAQCSRQISD 881
               TE   D ++  A     Q  +    YG  F  G       +  FF L  Q      D
Sbjct: 529  DSSTESILDNERQPAQESRSQGKIGLGIYGKYFSAGSGWLMVILVAFFCLGTQILASGGD 588

Query: 882  FWVRWWVNDEYKKFPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLWWVLKSS 1055
            +++ +W         VK    S++T  Y  I+  +     IF + R   F    + SS
Sbjct: 589  YFLSYW---------VKNNDSSSSTDIY--IFSGINAALVIFALLRTLLFFSMAMHSS 635

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 12/195 (6%)
 Frame = +3

Query: 15   FEVKPGQVVAVVGRIAAGKSSLVQAIL------GNMVKEH------GSFNVGGRISYVPQ 158
            F + P + + +VGR  AGKSSL+ A+       G++V ++      G  ++  +IS +PQ
Sbjct: 908  FIIMPREKIGIVGRTGAGKSSLINALFRLSYNEGSLVIDNTDILGIGLHDLRSKISIIPQ 967

Query: 159  NPWLQNLSLRDNVLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQR 338
             P L + +LR N+   EQ+ + K  + +E   L  ++  L NG +S     G N+S GQR
Sbjct: 968  EPVLFSGTLRCNLDPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVAEGGSNYSVGQR 1027

Query: 339  QRVNLARCAYADADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRC 518
            Q V LAR    +  ++++D A + VD  T   +    I+  F D  V+ + H++  +   
Sbjct: 1028 QLVCLARAILRENRILVMDEATANVDPQT-DALIQSTIRRKFRDCTVLTIAHRLNTIIDS 1086

Query: 519  DNVAIMDEGRCLYFG 563
            D V ++D G  + FG
Sbjct: 1087 DRVMVLDAGTLVEFG 1101

>gb|AAL85706.1|AF474335_1 ABC transporter ABCC.3 [Dictyostelium discoideum]
          Length = 1390

 Score =  202 bits (513), Expect = 1e-50
 Identities = 128/357 (35%), Positives = 190/357 (52%), Gaps = 15/357 (4%)
 Frame = +3

Query: 15   FEVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLSLRDN 194
            FE K   +  +VG + +GKSSL+QA+LG M    GS  + G ++YVPQ  W+ N +L+DN
Sbjct: 440  FEAKGKTLTMIVGSVGSGKSSLIQAMLGEMDVLDGSVAMKGNVAYVPQQAWIINATLKDN 499

Query: 195  VLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARCAYAD 374
            +LFG  +DE KY  V+E CAL  D+++   GD  + G RGVN SGGQ+QRV++AR  Y+D
Sbjct: 500  ILFGSPYDEAKYRKVLEVCALERDIELFPQGDLVEIGERGVNLSGGQKQRVSIARAVYSD 559

Query: 375  ADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDEGRCL 554
            +D+ +LD+ LSAVD H   H+F +C KG+   K V+L  +Q+ ++P   N  ++  G   
Sbjct: 560  SDVYILDDPLSAVDAHVGKHLFHRCFKGILKSKTVILAANQLNYLPFAHNTVVLKAGEIS 619

Query: 555  YFGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLAPTSI 734
              G +    Q L+      + LL A G  E+  A  +  ED    ++S ++ +       
Sbjct: 620  ERGSY----QQLINAQKEFSGLLQAYGVDES--AVNEDVEDDKEIEESDNIVV----EEK 669

Query: 735  GKPTEKPKDVQK---LTAYQ-------AALIYTWY---GNLFLVGVCFFFFLAAQCSRQI 875
             KPTEKPK   K   LT+ +       A  +Y  Y   G  FL  + F FFL    +R  
Sbjct: 670  TKPTEKPKLQNKDGVLTSQEEREEGAVAMWVYWKYITVGGGFLFLMAFIFFLMDTGTRTF 729

Query: 876  SDFWVRWWVNDEYKK--FPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLWW 1040
             D+W+  W N+  K      +G + S  T    L   + VG+  I +I  G  FL++
Sbjct: 730  VDWWLSHWQNESTKNALAVAQGLEPSGLTDTQYLGIYIGVGMTSI-LISAGRNFLFF 785

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
 Frame = +3

Query: 18   EVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGR-------------ISYVPQ 158
            E+K  + + +VGR  AGKSS+V A+   +    G+  + G              ++ +PQ
Sbjct: 1063 EIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGAILIDGENIAKFGLKDLRRNLAIIPQ 1122

Query: 159  NPWLQNLSLRDNV-LFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQ 335
            +P L + +LR+N+  F E+ D+  ++ V++   L    + L  G  SK    G N+S GQ
Sbjct: 1123 DPVLFSGTLRENIDPFNEKTDDQLWS-VLKDIQLHDVAKSLEGGLDSKVTENGDNWSVGQ 1181

Query: 336  RQRVNLARCAYADADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPR 515
            RQ + LAR    D  +++LD A ++VD H+   +    I+  FS+  ++ + H++  +  
Sbjct: 1182 RQLLCLARALLRDPKILVLDEATASVDGHS-DSLIQATIREKFSNCTILTIAHRLNTIMD 1240

Query: 516  CDNVAIMDEGRCLYFGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQK 695
             D + ++D G+   F +     Q+  G L     L+   G Q A    ++ A+ K     
Sbjct: 1241 SDRIIVLDAGKISEFDEPWTLLQNPAGLL---NWLVEETGPQNAAYL-RRLAQAKKDGVN 1296

Query: 696  SQSLQLTLAPTSIGKP 743
               +   ++PT   KP
Sbjct: 1297 IDQITPPISPTPEQKP 1312

>ref|NP_038818.1| ATP-binding cassette, sub-family C, member 5; ATP-binding cassette,
            sub-family C (CFTR/MRP), member 5a; ATP-binding cassette,
            sub-family C (CFTR/MRP), member 5b [Mus musculus]
            gi|8928229|sp|Q9R1X5|MRP5_MOUSE Multidrug
            resistance-associated protein 5 (ABC transporter MOAT-C)
            (SMRP) gi|4587085|dbj|BAA76609.1| MRP5 [Mus musculus]
          Length = 1436

 Score =  200 bits (508), Expect = 4e-50
 Identities = 125/366 (34%), Positives = 186/366 (50%), Gaps = 20/366 (5%)
 Frame = +3

Query: 18   EVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLSLRDNV 197
            E++ G++V + G + +GK+SLV AILG M    GS  V G  +YV Q  W+ N +LRDN+
Sbjct: 584  EIEEGKLVGICGSVGSGKTSLVSAILGQMTLLEGSIAVSGTFAYVAQQAWILNATLRDNI 643

Query: 198  LFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARCAYADA 377
            LFG++FDE +Y  V+ SC L  DL IL N D ++ G RG N SGGQRQR++LAR  Y+D 
Sbjct: 644  LFGKEFDEERYNSVLNSCCLRPDLAILPNSDLTEIGERGANLSGGQRQRISLARALYSDR 703

Query: 378  DLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDEGRCLY 557
             + +LD+ LSA+D H  +HIF+  I+     K V+ VTHQ++++  CD V  M EG C+ 
Sbjct: 704  SIYILDDPLSALDAHVGNHIFNSAIRKRLKSKTVLFVTHQLQYLVDCDEVIFMKEG-CIT 762

Query: 558  FGKWNEEAQHLLGKLLPITHLLHAAGSQEAPPAPKKKAEDKAGPQKSQSLQLTLAPTSIG 737
                +EE  +L G    I + L      E PP      ++  G QKSQ       P S+ 
Sbjct: 763  ERGTHEELMNLNGDYATIFNNLLLG---ETPPVEINSKKEATGSQKSQ--DKGPKPGSVK 817

Query: 738  K----PTEKPKDVQKLTAYQAALIYTWY-------GNLFLVGVCFFFFLAAQCSRQISDF 884
            K     +E+ + VQ     Q ++ ++ Y       G      V    F+    S   S +
Sbjct: 818  KEKAVKSEEGQLVQVEEKGQGSVPWSVYWVYIQAAGGPLAFLVIMVLFMLNVGSTAFSTW 877

Query: 885  WVRWWVN---------DEYKKFPVKGEQDSAATTFYCLIYLLLVGLFYIFMIFRGATFLW 1037
            W+ +W+             + F     +D+    +Y  IY L + +  I    RG  F+ 
Sbjct: 878  WLSYWIKQGSGNSTVYQGNRSFVSDSMKDNPFMQYYASIYALSMAVMLILKAIRGVVFVK 937

Query: 1038 WVLKSS 1055
              L++S
Sbjct: 938  GTLRAS 943

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 50/204 (24%), Positives = 100/204 (48%), Gaps = 22/204 (10%)
 Frame = +3

Query: 15   FEVKPGQVVAVVGRIAAGKSSLVQAIL-------------GNMVKEHGSFNVGGRISYVP 155
            F +KP + + +VGR  +GKSSL  A+              G  + + G  ++  +++ +P
Sbjct: 1214 FTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGIRISDIGLADLRSKLAIIP 1273

Query: 156  QNPWLQNLSLRDNVLFGEQFDENKYTDVIE---------SCALTLDLQILSNGDQSKAGI 308
            Q P L + ++R N+    Q+ E++  D +E            L L+ +++ NGD      
Sbjct: 1274 QEPVLFSGTVRSNLDPFNQYTEDQIWDALERTHMKECIAQLPLKLESEVMENGD------ 1327

Query: 309  RGVNFSGGQRQRVNLARCAYADADLVLLDNALSAVDHHTVHHIFDKCIKGLFSDKAVVLV 488
               NFS G+RQ + +AR       +++LD A +A+D  T   +  + I+  F+D  ++ +
Sbjct: 1328 ---NFSVGERQLLCIARALLRHCKILILDEATAAMDTET-DLLIQETIREAFADCTMLTI 1383

Query: 489  THQIEFMPRCDNVAIMDEGRCLYF 560
             H++  +   D + ++ +G+ + F
Sbjct: 1384 AHRLHTVLGSDRIMVLAQGQVVEF 1407



EST assemble image


clone accession position
1 MXL002g02_r BP093055 1 470
2 MXL011f03_r BP093659 5 178
3 LCL050c08_r BP093659 176 560
4 LCL029h09_r BP093659 208 684
5 MXL006c02_r BP093289 316 547
6 LCL080e10_r BP093289 517 949
7 HCL059f06_r BP093289 622 1121




Chlamydomonas reinhardtii
Kazusa DNA Research Institute