Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002554A_C01 KCC002554A_c01
(475 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC87706.1| coatomer subunit beta [Botryococcus braunii] 159 1e-38
ref|NP_194876.1| coatomer beta subunit (beta-coat protein) (beta... 139 2e-32
pir||T10679 hypothetical protein F3L17.60 - Arabidopsis thaliana... 139 2e-32
ref|NP_194877.2| coatomer beta subunit (beta-coat protein) (beta... 139 2e-32
dbj|BAB17749.1| putative coatmer beta subunit (beta-coat protein... 130 1e-29
>dbj|BAC87706.1| coatomer subunit beta [Botryococcus braunii]
Length = 947
Score = 159 bits (403), Expect = 1e-38
Identities = 82/104 (78%), Positives = 92/104 (87%)
Frame = +1
Query: 163 MANAVERSCTMLVYNDKQASASEIREALEGNDPLAKQAAMKKAVSLLLAGEQLPALFITI 342
MA +VERSCTMLV+ DK SA+EI++ALEGND AK AM+ A+S+LL GEQLPALFITI
Sbjct: 1 MAMSVERSCTMLVHYDKPGSATEIKDALEGNDSAAKVLAMQWAISMLLNGEQLPALFITI 60
Query: 343 VRYVLPSEDHMVQKLLLLYLEAIEKTDASGKLLPEMILICQNLR 474
VRYVLPS+DH +QKLLLLYLE IEKTDASGKLLPEMILICQNLR
Sbjct: 61 VRYVLPSDDHTLQKLLLLYLETIEKTDASGKLLPEMILICQNLR 104
>ref|NP_194876.1| coatomer beta subunit (beta-coat protein) (beta-COP), putative
[Arabidopsis thaliana] gi|7447850|pir||T10678
hypothetical protein F3L17.50 - Arabidopsis thaliana
gi|5262759|emb|CAB45907.1| putative protein [Arabidopsis
thaliana] gi|7270051|emb|CAB79866.1| putative protein
[Arabidopsis thaliana]
Length = 971
Score = 139 bits (349), Expect = 2e-32
Identities = 73/102 (71%), Positives = 85/102 (82%), Gaps = 2/102 (1%)
Frame = +1
Query: 175 VERSCTMLVYNDK--QASASEIREALEGNDPLAKQAAMKKAVSLLLAGEQLPALFITIVR 348
+++S TMLV+ DK A A+EI+EALEGND AK AMKKA+ LLL GE +P LFITI+R
Sbjct: 24 MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR 83
Query: 349 YVLPSEDHMVQKLLLLYLEAIEKTDASGKLLPEMILICQNLR 474
YVLPSEDH +QKLLLLYLE IEKTD+ GK+LPEMILICQNLR
Sbjct: 84 YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLR 125
>pir||T10679 hypothetical protein F3L17.60 - Arabidopsis thaliana
gi|5262760|emb|CAB45908.1| Beta-COP-like protein
[Arabidopsis thaliana] gi|7270052|emb|CAB79867.1|
Beta-COP-like protein [Arabidopsis thaliana]
Length = 958
Score = 139 bits (349), Expect = 2e-32
Identities = 73/102 (71%), Positives = 85/102 (82%), Gaps = 2/102 (1%)
Frame = +1
Query: 175 VERSCTMLVYNDK--QASASEIREALEGNDPLAKQAAMKKAVSLLLAGEQLPALFITIVR 348
+++S TMLV+ DK A A+EI+EALEGND AK AMKKA+ LLL GE +P LFITI+R
Sbjct: 1 MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR 60
Query: 349 YVLPSEDHMVQKLLLLYLEAIEKTDASGKLLPEMILICQNLR 474
YVLPSEDH +QKLLLLYLE IEKTD+ GK+LPEMILICQNLR
Sbjct: 61 YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLR 102
>ref|NP_194877.2| coatomer beta subunit (beta-coat protein) (beta-COP), putative
[Arabidopsis thaliana]
Length = 948
Score = 139 bits (349), Expect = 2e-32
Identities = 73/102 (71%), Positives = 85/102 (82%), Gaps = 2/102 (1%)
Frame = +1
Query: 175 VERSCTMLVYNDK--QASASEIREALEGNDPLAKQAAMKKAVSLLLAGEQLPALFITIVR 348
+++S TMLV+ DK A A+EI+EALEGND AK AMKKA+ LLL GE +P LFITI+R
Sbjct: 1 MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR 60
Query: 349 YVLPSEDHMVQKLLLLYLEAIEKTDASGKLLPEMILICQNLR 474
YVLPSEDH +QKLLLLYLE IEKTD+ GK+LPEMILICQNLR
Sbjct: 61 YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLR 102
>dbj|BAB17749.1| putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza
sativa (japonica cultivar-group)]
gi|13873019|dbj|BAB44123.1| putative coatmer beta
subunit (beta-coat protein) (beta-COP) [Oryza sativa
(japonica cultivar-group)]
Length = 1036
Score = 130 bits (326), Expect = 1e-29
Identities = 70/110 (63%), Positives = 83/110 (74%), Gaps = 2/110 (1%)
Frame = +1
Query: 151 GAATMANAVERSCTMLVYNDK--QASASEIREALEGNDPLAKQAAMKKAVSLLLAGEQLP 324
G + A+E+ T+LV+ DK A A EI+ LEG+D AK AMK+AV LLL GE LP
Sbjct: 79 GGVARSGAMEKPSTLLVHFDKGSAAMAGEIKADLEGSDVAAKVDAMKRAVMLLLNGETLP 138
Query: 325 ALFITIVRYVLPSEDHMVQKLLLLYLEAIEKTDASGKLLPEMILICQNLR 474
LFIT+VRYVLPSEDH +QKLLLLYLE I+K DA+G+ LPEMILICQNLR
Sbjct: 139 TLFITVVRYVLPSEDHTIQKLLLLYLEIIDKRDAAGRGLPEMILICQNLR 188
