Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002547A_C01 KCC002547A_c01
(507 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00050789.1| COG1629: Outer membrane receptor proteins, mo... 43 0.002
sp|P20186|YT35_STRFR Hypothetical 35.5 kDa protein in transposon... 40 0.017
gb|AAO62939.1| glycoprotein D [Pseudorabies virus] 39 0.049
ref|NP_442522.1| unknown protein [Synechocystis sp. PCC 6803] gi... 38 0.083
ref|XP_160538.2| hypothetical protein XP_160538 [Mus musculus] 37 0.11
>ref|ZP_00050789.1| COG1629: Outer membrane receptor proteins, mostly Fe transport
[Magnetospirillum magnetotacticum]
Length = 464
Score = 43.1 bits (100), Expect = 0.002
Identities = 23/64 (35%), Positives = 29/64 (44%), Gaps = 2/64 (3%)
Frame = -3
Query: 499 APAGSPQPTAPAPGLPGRRWLRWRIVACGASPESYHA--LRRERPSAPRMPSAAPPSRRG 326
A + +P A P P RRW R+R C P + + RR RPSA + RR
Sbjct: 401 ATSRTPSTPATPPSAPSRRWTRFRSSGCPTPPRTAASPRARRSRPSAGSASCSNRRRRRR 460
Query: 325 WWQR 314
WW R
Sbjct: 461 WWSR 464
>sp|P20186|YT35_STRFR Hypothetical 35.5 kDa protein in transposon Tn4556
gi|80759|pir||JQ0431 hypothetical 35.5K protein -
Streptomyces fradiae transposon Tn4556
gi|1196912|gb|AAA88561.1| unknown protein [Streptomyces
fradiae]
Length = 348
Score = 40.0 bits (92), Expect = 0.017
Identities = 28/86 (32%), Positives = 35/86 (40%)
Frame = -3
Query: 505 RPAPAGSPQPTAPAPGLPGRRWLRWRIVACGASPESYHALRRERPSAPRMPSAAPPSRRG 326
RP + + P A AP P L R P S RP+ P +P+A PP R
Sbjct: 236 RPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSS-------RPARPPIPAARPPPR-- 286
Query: 325 WWQRTPGSVPERTLPCPAGAGCTQHR 248
RTPG+ A AGC+ R
Sbjct: 287 ---RTPGTPRPAAARARAPAGCSPAR 309
Score = 31.2 bits (69), Expect = 7.7
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = -3
Query: 502 PAPAGSPQPTAPAPGLPGRRWLRWRIVACGASPE-------SYHALRRERPSAPRMPSAA 344
P PA P P PG P R R A G SP + R R +PR P+A
Sbjct: 277 PIPAARPPPRR-TPGTPRPAAARARAPA-GCSPARRTPSAPTDRRCRAARRGSPRPPAAR 334
Query: 343 PPSRRG 326
PP R+G
Sbjct: 335 PPGRQG 340
>gb|AAO62939.1| glycoprotein D [Pseudorabies virus]
Length = 402
Score = 38.5 bits (88), Expect = 0.049
Identities = 29/87 (33%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = -3
Query: 505 RPAPAGSPQPTAPAPGLPGR-RWLRWRIVACGASPESYHALRRERPSAPRMPSAAPPSRR 329
RP P P+PT P PGR R A G P R RP P P A P
Sbjct: 274 RPRPRPKPEPTPATPAPPGRLPEPATRDHAAGGRPTP----RPPRPETPHRPFAPPAVVP 329
Query: 328 GWWQRTPGSVPERTLPCPAGAGCTQHR 248
W + P RT P G ++HR
Sbjct: 330 SGWPQPAEPFPPRTTAAP---GVSRHR 353
>ref|NP_442522.1| unknown protein [Synechocystis sp. PCC 6803] gi|7469676|pir||S76648
hypothetical protein - Synechocystis sp. (strain PCC
6803) gi|1001754|dbj|BAA10592.1| slr0514 [Synechocystis
sp. PCC 6803]
Length = 295
Score = 37.7 bits (86), Expect = 0.083
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -3
Query: 502 PAPAGSPQPTAPAPGLPGRRWLRWRIVACGASPESYHALRRERPSAPRMPSAAPPSRRGW 323
P P SPQ AP PG R + ++A SP L + P A + P P R+
Sbjct: 100 PPPKKSPQVLAPLPGSQSVREVVPDVIAPPPSPPQTTPLPKASPKAVKAPQGEPNQRQDN 159
Query: 322 WQRTPGSVPE 293
+ P SVPE
Sbjct: 160 EKIEPESVPE 169
>ref|XP_160538.2| hypothetical protein XP_160538 [Mus musculus]
Length = 639
Score = 37.4 bits (85), Expect = 0.11
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = -3
Query: 505 RPAPAGSPQPTAPAPGLP-GRRWLRWRIVACGASPESYHALRRERPSAPR-MPSAAPPSR 332
RPA A S +PTAP G P R W A + + Y ++ RP+ P PPS+
Sbjct: 154 RPAAALSLRPTAPDRGQPLNPRGHIWLCFALNLASQHYLTNKKRRPATTHPSPPPLPPSQ 213
Query: 331 RGWWQRTPGSVPERTLPCPAGAGCTQHRLH*GHRP*LY 218
PG+ P + GAG + R H P LY
Sbjct: 214 GLALSHNPGTSPRQARGPTPGAGQPRVRTGQSH-PQLY 250
