KCC002545A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002545A_C01 KCC002545A_c01
ctgctatggtggccgcaaccgcctggtcgcctgcgagtggaccaaggcgcagatggaggg
caagccgcgaacctttgaggACCTGGAGACGGACCTGCTCAAGGGCCAGAAGCTGCAGGG
CGTCCTCACCAGCAACGAGGTGCAGGAGATCCTCAAGGTGCGCGGCTGGGAGTCGCAGTA
CCCGCTGTTCACCACAGTCAACCGCATCATCAACGGCTACCTGCCGCCCAAGTACGTGGT
GGAGTTCGTGGCTGGCGCCAAGTACCACATCCGCCGCCCCGGCACCGACGATGAGGAGAT
TGTCCCTGTGCGGCCCAAGCGCCCCGCTGCCGCCGGTGGCGTGGCCACCGCACCCATTCT
TGCCGCCTAAGCAGCGGCAGCGGCTAGCCCTGCATTGCACCAGAGAGCAAATGGAGACTG
CGGCGGAAGTAGCTGCGGTGACAGCAGCAGGAGTGAGGAGCAGGCACTTATGCTGGTGCG
GATGTCTCATGAAGGCATGAACAAGATGTTGTTGAAGATGAGGGCAGGTTGAAGCATTTT
CTCTAGAATTGAGCGCGTCCGAGGGCTTCATGCAGCCTTGCGCGCCGTTGTAGACCCGAC
ACCGGTCGTGGCGCCGCATGGGCAAGGGCGCTCGGTAGGTGTGTGTATCATTGAGCGGGA
TCACATTCGGTCCCTTCAGATGTGTGCGCGCGCAAAGCGCGCGTTGTTGCTTGCGCACGA
CACCCGTATTCACCTACCATGTAGATTATACGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002545A_C01 KCC002545A_c01
         (754 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P52425|GPDA_CUPLA GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD+] g...    86  8e-16
dbj|BAB63674.1| putative glycerol-3-phosphate dehydrogenase (NAD...    82  1e-14
gb|AAL87336.1| putative dihydroxyacetone 3-phosphate reductase d...    80  3e-14
ref|NP_198877.1| dihydroxyacetone 3-phosphate reductase (dhaprd)...    80  3e-14
dbj|BAA74841.1| G-3-P dehydrogenase [Drosophila novamexicana]          71  2e-11

>sp|P52425|GPDA_CUPLA GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD+] gi|840731|emb|CAA56125.1|
           glycerol-3-phosphate dehydrogenase (NAD+) [Cuphea
           lanceolata]
          Length = 372

 Score = 85.5 bits (210), Expect = 8e-16
 Identities = 43/82 (52%), Positives = 56/82 (67%)
 Frame = +2

Query: 2   CYGGRNRLVACEWTKAQMEGKPRTFEDLETDLLKGQKLQGVLTSNEVQEILKVRGWESQY 181
           C GGRNR VA  + K    G  R+F+DLE ++L+GQKLQGV T+ EV E+L  RGW   +
Sbjct: 285 CLGGRNRKVAEAFAK---NGGKRSFDDLEAEMLRGQKLQGVSTAKEVYEVLGHRGWLELF 341

Query: 182 PLFTTVNRIINGYLPPKYVVEF 247
           PLF+TV+ I  G LPP  +VE+
Sbjct: 342 PLFSTVHEISTGRLPPSAIVEY 363

>dbj|BAB63674.1| putative glycerol-3-phosphate dehydrogenase (NAD+) [Oryza sativa
           (japonica cultivar-group)]
          Length = 333

 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 40/82 (48%), Positives = 55/82 (66%)
 Frame = +2

Query: 2   CYGGRNRLVACEWTKAQMEGKPRTFEDLETDLLKGQKLQGVLTSNEVQEILKVRGWESQY 181
           C GGRNR VA  + +    G  R+F++LE ++L GQKLQGV T+ EV E+L  RGW+  +
Sbjct: 238 CLGGRNRRVAEAFAR---NGGKRSFDELEAEMLHGQKLQGVSTAKEVYEVLTYRGWQELF 294

Query: 182 PLFTTVNRIINGYLPPKYVVEF 247
           PL +TV+ I  G LPP  +VE+
Sbjct: 295 PLLSTVHEICIGQLPPTSIVEY 316

>gb|AAL87336.1| putative dihydroxyacetone 3-phosphate reductase dhaprd [Arabidopsis
           thaliana]
          Length = 395

 Score = 80.5 bits (197), Expect = 3e-14
 Identities = 41/82 (50%), Positives = 60/82 (73%)
 Frame = +2

Query: 2   CYGGRNRLVACEWTKAQMEGKPRTFEDLETDLLKGQKLQGVLTSNEVQEILKVRGWESQY 181
           C GGRNR VA  + K++  GK R+F++LE ++L+GQKLQGV T+ EV E+LK  GW   +
Sbjct: 312 CLGGRNRRVAEAFAKSR--GK-RSFDELEAEMLQGQKLQGVSTAREVYEVLKHCGWLEMF 368

Query: 182 PLFTTVNRIINGYLPPKYVVEF 247
           PLF+TV++I  G L P+ +V++
Sbjct: 369 PLFSTVHQICTGRLQPEAIVQY 390

>ref|NP_198877.1| dihydroxyacetone 3-phosphate reductase (dhaprd) [Arabidopsis
           thaliana] gi|6686813|emb|CAB64726.1| dihydroxyacetone
           3-phosphate reductase [Arabidopsis thaliana]
           gi|9758088|dbj|BAB08532.1| dihydroxyacetone 3-phosphate
           reductase [Arabidopsis thaliana]
           gi|24030418|gb|AAN41367.1| putative dihydroxyacetone
           3-phosphate reductase dhaprd [Arabidopsis thaliana]
          Length = 400

 Score = 80.5 bits (197), Expect = 3e-14
 Identities = 41/82 (50%), Positives = 60/82 (73%)
 Frame = +2

Query: 2   CYGGRNRLVACEWTKAQMEGKPRTFEDLETDLLKGQKLQGVLTSNEVQEILKVRGWESQY 181
           C GGRNR VA  + K++  GK R+F++LE ++L+GQKLQGV T+ EV E+LK  GW   +
Sbjct: 317 CLGGRNRRVAEAFAKSR--GK-RSFDELEAEMLQGQKLQGVSTAREVYEVLKHCGWLEMF 373

Query: 182 PLFTTVNRIINGYLPPKYVVEF 247
           PLF+TV++I  G L P+ +V++
Sbjct: 374 PLFSTVHQICTGRLQPEAIVQY 395

>dbj|BAA74841.1| G-3-P dehydrogenase [Drosophila novamexicana]
          Length = 353

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 36/91 (39%), Positives = 56/91 (60%)
 Frame = +2

Query: 2   CYGGRNRLVACEWTKAQMEGKPRTFEDLETDLLKGQKLQGVLTSNEVQEILKVRGWESQY 181
           CYGGRNR V+  +  +      +T EDLE ++L GQKLQG  T+ EV  +LK +G E ++
Sbjct: 266 CYGGRNRRVSEAFVTSG-----KTIEDLEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKF 320

Query: 182 PLFTTVNRIINGYLPPKYVVEFVAGAKYHIR 274
           PLFT +++I    L PK +++ +     H++
Sbjct: 321 PLFTAIHKICTNQLKPKDLIDCIRNHPEHMQ 351



EST assemble image


clone accession position
1 LC028h01_r AV620936 1 465
2 HCL055h03_r AV642675 244 754




Chlamydomonas reinhardtii
Kazusa DNA Research Institute