Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002542A_C01 KCC002542A_c01
(530 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_822499.1| putative arabinogalactan endo-1,4-beta-galactos... 38 0.093
ref|ZP_00055887.1| COG0285: Folylpolyglutamate synthase [Magneto... 27 2.7
ref|ZP_00021624.1| COG0412: Dienelactone hydrolase and related e... 32 3.9
ref|NP_523042.1| HYPOTHETICAL PROTEIN [Ralstonia solanacearum] g... 32 6.7
ref|NP_643655.1| conserved hypothetical protein [Xanthomonas axo... 31 8.7
>ref|NP_822499.1| putative arabinogalactan endo-1,4-beta-galactosidase [Streptomyces
avermitilis MA-4680] gi|29604966|dbj|BAC69034.1|
putative arabinogalactan endo-1,4-beta-galactosidase
[Streptomyces avermitilis MA-4680]
Length = 522
Score = 37.7 bits (86), Expect = 0.093
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Frame = +2
Query: 11 LHSAQLHLGARPSPRCKWAAPVCSFLKRTPIPYYSILVGKHAQANWKTPCSGGPPVAQ-- 184
++ A+L + P+ V + KR +LV H W P + P A
Sbjct: 221 MNYARLKVWVNPADGYNNKTRVLAMAKRVKAQGMKLLVDFHYSDTWADPGAQSKPAAWAG 280
Query: 185 HAYTAMLTDVYQHAQQLATPL----ATAVVEGLQLQISGIQLFK--APPNFKGLEGVAM* 346
H+Y+ + TDVY H + + L TA + + +I+G L+ + N+ L G+
Sbjct: 281 HSYSQLKTDVYNHTYDVLSALKSQGTTADMVQIGNEINGGMLWSEGSTDNWPQLAGLLNS 340
Query: 347 GLS---AVTFWE*LASRFQRSGSGPAYRAMYGGRLCFDTRIGGG 469
G S AV+ +A + G + G R FD + GG
Sbjct: 341 GYSATKAVSSSTVVALHLAKGGD------LAGTRAWFDKAVAGG 378
>ref|ZP_00055887.1| COG0285: Folylpolyglutamate synthase [Magnetospirillum
magnetotacticum]
Length = 487
Score = 26.9 bits (58), Expect(2) = 2.7
Identities = 22/71 (30%), Positives = 31/71 (42%), Gaps = 2/71 (2%)
Frame = -3
Query: 501 WTVSRVWACYCPPPIRVSKHRRPPYIAL*AGPLPERWKRLASYSQNVTADKPYIATPS-- 328
W V+ + +CPPP R + P IA P P+ + S +T P + S
Sbjct: 15 WNVTAAASGWCPPPTRAAPSPSPCRIA----PDPKFTAMIDSILDRLTRLHPKVIDLSLE 70
Query: 327 RPLKLGGALNN 295
R L+L AL N
Sbjct: 71 RVLRLLDALGN 81
Score = 24.6 bits (52), Expect(2) = 2.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 287 RISGAVGPPQQRWLRVSQVAGRAGKRP*ASQCKRAARRAGLR 162
R+ A+G PQ + V VAG GK + + AG+R
Sbjct: 74 RLLDALGNPQDKLAPVIHVAGTNGKGSTVATLRALFEAAGMR 115
>ref|ZP_00021624.1| COG0412: Dienelactone hydrolase and related enzymes [Ralstonia
metallidurans]
Length = 309
Score = 32.3 bits (72), Expect = 3.9
Identities = 27/78 (34%), Positives = 33/78 (41%), Gaps = 3/78 (3%)
Frame = +1
Query: 142 ELEDALFRRPARRAARLHCDAHGRLPARPATCDTLSHRC-CGGPTAPDIRHSIVQSTPQL 318
+LE +FR P L HG+ P +PA R TA +R V + P
Sbjct: 52 DLETTIFRPPGEGRRPLVVINHGKTPGKPA----FQRRARFAAQTAEFVRRGFVVALPMR 107
Query: 319 QG--PRGGCYVGFVRCDV 366
QG GG YVG CDV
Sbjct: 108 QGFSKSGGKYVG-GSCDV 124
>ref|NP_523042.1| HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
gi|17431957|emb|CAD18634.1| HYPOTHETICAL PROTEIN
[Ralstonia solanacearum]
Length = 219
Score = 31.6 bits (70), Expect = 6.7
Identities = 22/54 (40%), Positives = 24/54 (43%), Gaps = 1/54 (1%)
Frame = +1
Query: 136 SGELEDALFR-RPARRAARLHCDAHGRLPARPATCDTLSHRCCGGPTAPDIRHS 294
SG LED R R AR A + A PAR A D L H P D RH+
Sbjct: 54 SGLLEDYAARERMARDAGQTGSPASSAQPARGALADLLDHIASRAPARNDSRHA 107
>ref|NP_643655.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21109697|gb|AAM38191.1| conserved
hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 470
Score = 31.2 bits (69), Expect = 8.7
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 136 SGELE-DALFRRPARRAARLHCDAHG-RLPARPATCDTLSHRCCGGPTAP 279
SG+LE + RR R AAR H D A D S CCG P+AP
Sbjct: 61 SGDLECGGVSRRARRGAARCHGDRRAWTRAAHRLAADGCSAGCCGTPSAP 110
