KCC002538A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002538A_C01 KCC002538A_c01
ccacccaaacatcgtgaagctattggcggtctgcctaacgccgccgCGCTTCTGCATGGT
AATGGAGCTAATGCAGCTGAACCTGGCGCAGCTGCTGCACGGCGACATCGGCCGTGTGTG
CACCTGCGGCGCGCAGGGCAGCGGCCCCTGCAGCCCCTACTGCCCCATGAGCAGCCGCGC
GTTGCCCCTGGTCATGGTGCTTGATATCGCCATTGACGTCGCACGGGCCCTGGCGTACCT
TCACCCAACCGTCAGCCATCGGGACCTGAAACCAGCGAACGTGCTGCTGACTTGGTCGGA
GAGCGCCGAGGCGCTAGCTGCATCAGCGCGCAGTGGCGGCAGCGGCAGCGCGGCCAGCGG
CGGAGGGCGTCGGCGCCGCATTGTTGCAAAGCTGTCGGACTTCGGCATTTCCCGCATGTC
GCACACGCTGCGCGCGACAATCACGCCAGAGGCCGGCACGCCCGCCTACATCGCCCCCGA
GTGCTTCAACCCAGCCAACTGGCTGGTCAGCTGCAAGAGCGACATGTACGCCTACGGGGT
GCTACTGTGGGAGCTGCTCACAAGCCTGGAGCCGTGGAAGGGCATCCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002538A_C01 KCC002538A_c01
         (589 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_663583.1| cDNA sequence BC021891; mixed lineage kinase 4 ...    95  8e-19
emb|CAC17571.1| dJ862P8.3 (Similar to MAP3K10 (mitogen-activated...    95  8e-19
ref|XP_226572.2| similar to Mixed lineage kinase 4 [Rattus norve...    91  9e-18
emb|CAC84639.1| mixed lineage kinase 4alpha [Homo sapiens]             91  9e-18
ref|NP_115811.1| mixed lineage kinase 4 [Homo sapiens] gi|177367...    91  9e-18

>ref|NP_663583.1| cDNA sequence BC021891; mixed lineage kinase 4 [Mus musculus]
           gi|18257338|gb|AAH21891.1| CDNA sequence BC021891 [Mus
           musculus]
          Length = 1001

 Score = 94.7 bits (234), Expect = 8e-19
 Identities = 67/199 (33%), Positives = 100/199 (49%), Gaps = 4/199 (2%)
 Frame = +2

Query: 2   HPNIVKLLAVCLTPPRFCMVMELMQLNLAQLLHGDIGRVCTCGAQGSGPCSPYCPMSSRA 181
           HPNI++L  VCL  P  C+V+E  +        G + R     A  S P +P  P  +R 
Sbjct: 166 HPNIIQLRGVCLRQPHLCLVLEFAR-------GGALNRALAAAA--SDPRAP-GPRRARR 215

Query: 182 LPLVMVLDIAIDVARALAYLHP----TVSHRDLKPANVLLTWSESAEALAASARSGGSGS 349
           +P  ++++ A+ +AR + YLH      + HRDLK +N+LL      + +           
Sbjct: 216 IPPQVLVNWAVQIARGMLYLHEEAVVPILHRDLKSSNILLLEKIEHDDICNK-------- 267

Query: 350 AASGGGRRRRIVAKLSDFGISRMSHTLRATITPEAGTPAYIAPECFNPANWLVSCKSDMY 529
                        K++DFG++R  H  R T    AGT A++APE    +  L S  SD++
Sbjct: 268 -----------TLKITDFGLAREWH--RTTRMSAAGTYAWMAPEVIRSS--LFSKGSDIW 312

Query: 530 AYGVLLWELLTSLEPWKGI 586
           +YGVLLWELLT   P++GI
Sbjct: 313 SYGVLLWELLTGEVPYRGI 331

>emb|CAC17571.1| dJ862P8.3 (Similar to MAP3K10 (mitogen-activated protein kinase
           kinase kinase 10)) [Homo sapiens]
          Length = 564

 Score = 94.7 bits (234), Expect = 8e-19
 Identities = 65/199 (32%), Positives = 98/199 (48%), Gaps = 4/199 (2%)
 Frame = +2

Query: 2   HPNIVKLLAVCLTPPRFCMVMELMQLNLAQLLHGDIGRVCTCGAQGSGPCSPYCPMSSRA 181
           HPNI++L  VCL  P  C+V+E  +        G + R          P +P  P  +R 
Sbjct: 180 HPNIIELRGVCLQQPHLCLVLEFAR-------GGALNRALAAANAAPDPRAP-GPRRARR 231

Query: 182 LPLVMVLDIAIDVARALAYLHP----TVSHRDLKPANVLLTWSESAEALAASARSGGSGS 349
           +P  ++++ A+ +AR + YLH      + HRDLK +N+LL      + +           
Sbjct: 232 IPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSSNILLLEKIEHDDICNK-------- 283

Query: 350 AASGGGRRRRIVAKLSDFGISRMSHTLRATITPEAGTPAYIAPECFNPANWLVSCKSDMY 529
                        K++DFG++R  H  R T    AGT A++APE    +  L S  SD++
Sbjct: 284 -----------TLKITDFGLAREWH--RTTKMSTAGTYAWMAPEVIKSS--LFSKGSDIW 328

Query: 530 AYGVLLWELLTSLEPWKGI 586
           +YGVLLWELLT   P++GI
Sbjct: 329 SYGVLLWELLTGEVPYRGI 347

>ref|XP_226572.2| similar to Mixed lineage kinase 4 [Rattus norvegicus]
          Length = 995

 Score = 91.3 bits (225), Expect = 9e-18
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 4/199 (2%)
 Frame = +2

Query: 2   HPNIVKLLAVCLTPPRFCMVMELMQLNLAQLLHGDIGRVCTCGAQGSGPCSPYCPMSSRA 181
           HPNI++L  VCL  P  C+V+E  +        G + R     A    P  P  P  +R 
Sbjct: 166 HPNIIQLRGVCLQQPHLCLVLEFAR-------GGALNRALAAAAPD--PRVPG-PRRARR 215

Query: 182 LPLVMVLDIAIDVARALAYLHPT----VSHRDLKPANVLLTWSESAEALAASARSGGSGS 349
           +P  ++++ A+ +AR + YLH      + HRDLK +N+LL      + +           
Sbjct: 216 IPPHVLVNWAVQIARGMLYLHEEAVVPILHRDLKSSNILLLEKIEHDDICNKT------- 268

Query: 350 AASGGGRRRRIVAKLSDFGISRMSHTLRATITPEAGTPAYIAPECFNPANWLVSCKSDMY 529
                        K++DFG++R  H  R T    AGT A++APE    +  L S  SD++
Sbjct: 269 ------------LKITDFGLAREWH--RTTRMSAAGTYAWMAPEVIRSS--LFSKGSDIW 312

Query: 530 AYGVLLWELLTSLEPWKGI 586
           +YGVLLWELLT   P++GI
Sbjct: 313 SYGVLLWELLTGEVPYRGI 331

>emb|CAC84639.1| mixed lineage kinase 4alpha [Homo sapiens]
          Length = 570

 Score = 91.3 bits (225), Expect = 9e-18
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
 Frame = +2

Query: 2   HPNIVKLLAVCLTPPRFCMVMELMQLNLAQLLHGDIGRVCTCGAQGSGPCSPYCPMSSRA 181
           HPNI++L  VCL  P  C+V+E  +        G + R          P +P  P  +R 
Sbjct: 180 HPNIIELRGVCLQQPHLCLVLEFAR-------GGALNRALAAANAAPDPRAP-GPRRARR 231

Query: 182 LPLVMVLDIAIDVARALAYLHP----TVSHRDLKPANVLLTWSESAEALAASARSGGSGS 349
           +P  ++++ A+ +AR + YLH      + HRDLK +N+LL      + +           
Sbjct: 232 IPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSSNILLLEEIEHDDICNK-------- 283

Query: 350 AASGGGRRRRIVAKLSDFGISRMSHTLRATITPEAGTPAYIAPECFNPANWLVSCKSDMY 529
                        K++DFG++R  H  R T    AGT A++APE    +  L S  SD++
Sbjct: 284 -----------TLKITDFGLAREWH--RTTKMSTAGTYAWMAPEVIKSS--LFSKGSDIW 328

Query: 530 AYGVLLWELLTSLEPWKGI 586
           + GVLLWELLT   P++GI
Sbjct: 329 SCGVLLWELLTGEVPYRGI 347

>ref|NP_115811.1| mixed lineage kinase 4 [Homo sapiens] gi|17736731|emb|CAC84640.1|
           mixed lineage kinase 4beta [Homo sapiens]
          Length = 1036

 Score = 91.3 bits (225), Expect = 9e-18
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
 Frame = +2

Query: 2   HPNIVKLLAVCLTPPRFCMVMELMQLNLAQLLHGDIGRVCTCGAQGSGPCSPYCPMSSRA 181
           HPNI++L  VCL  P  C+V+E  +        G + R          P +P  P  +R 
Sbjct: 180 HPNIIELRGVCLQQPHLCLVLEFAR-------GGALNRALAAANAAPDPRAP-GPRRARR 231

Query: 182 LPLVMVLDIAIDVARALAYLHP----TVSHRDLKPANVLLTWSESAEALAASARSGGSGS 349
           +P  ++++ A+ +AR + YLH      + HRDLK +N+LL      + +           
Sbjct: 232 IPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSSNILLLEEIEHDDICNK-------- 283

Query: 350 AASGGGRRRRIVAKLSDFGISRMSHTLRATITPEAGTPAYIAPECFNPANWLVSCKSDMY 529
                        K++DFG++R  H  R T    AGT A++APE    +  L S  SD++
Sbjct: 284 -----------TLKITDFGLAREWH--RTTKMSTAGTYAWMAPEVIKSS--LFSKGSDIW 328

Query: 530 AYGVLLWELLTSLEPWKGI 586
           + GVLLWELLT   P++GI
Sbjct: 329 SCGVLLWELLTGEVPYRGI 347



EST assemble image


clone accession position
1 LC013f06_r AV619820 1 484
2 HCL053d11_r AV642530 47 589




Chlamydomonas reinhardtii
Kazusa DNA Research Institute