Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002530A_C01 KCC002530A_c01
(530 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL87160.1|AF480496_14 putative carbamoyl phosphate synthetas... 135 4e-31
emb|CAC85725.1| putative carbamoyl phosphate synthase small subu... 124 8e-28
gb|AAC25961.1| carbamoyl phosphate synthetase small subunit [Ara... 120 8e-27
ref|NP_566824.1| carbamoyl-phosphate synthase [glutamine-hydroly... 120 8e-27
ref|NP_459071.1| carbamoyl-phosphate synthetase, glutamine-hydro... 106 2e-22
>gb|AAL87160.1|AF480496_14 putative carbamoyl phosphate synthetase small subunit [Oryza sativa
(japonica cultivar-group)]
Length = 462
Score = 135 bits (339), Expect = 4e-31
Identities = 76/156 (48%), Positives = 99/156 (62%), Gaps = 3/156 (1%)
Frame = +1
Query: 70 AAGATQSTRSCVVDAHAQASSRQVITPFAPRASGKTACLGF---ARSAASVSGGRARSLV 240
A + S R A A++R V P PR G G R+A +VSG ++ ++V
Sbjct: 6 ATASAPSLRPSAASPRA-AAARSVAVPSGPRTVGPRRDGGRFLGVRAAKAVSGVQSGTVV 64
Query: 241 VRAAASASPFPKRNARLVLEDGSVWHATAFGATGTEIGEVVFNTSLSGYQEIMTDPSYKG 420
P+ +ARLVLEDGSVW A +FGA+GT++GEVVFNTSL+GYQEI+TDPSY G
Sbjct: 65 DDGVQR--PWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAG 122
Query: 421 QFVAFTCPHIGNVGINLEDMESTKCHLGAIIVRDLS 528
QFV T PHIGN G+N +D ES +C L +I+R+LS
Sbjct: 123 QFVLMTNPHIGNTGVNPDDEESNRCFLAGLIIRNLS 158
>emb|CAC85725.1| putative carbamoyl phosphate synthase small subunit [Nicotiana
tabacum]
Length = 432
Score = 124 bits (311), Expect = 8e-28
Identities = 56/88 (63%), Positives = 70/88 (78%)
Frame = +1
Query: 265 PFPKRNARLVLEDGSVWHATAFGATGTEIGEVVFNTSLSGYQEIMTDPSYKGQFVAFTCP 444
P+ +ARLVLEDGS+W A +FGA+GT++GEVVFNTSL+GYQEI+TDPSY GQFV T P
Sbjct: 54 PWKVADARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 113
Query: 445 HIGNVGINLEDMESTKCHLGAIIVRDLS 528
HIGN G+N D ES +C L +++R LS
Sbjct: 114 HIGNTGVNFGDEESMQCFLAGLVIRSLS 141
>gb|AAC25961.1| carbamoyl phosphate synthetase small subunit [Arabidopsis thaliana]
Length = 428
Score = 120 bits (302), Expect = 8e-27
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Frame = +1
Query: 217 GGRARSLVVRAAASASPFPKR----------NARLVLEDGSVWHATAFGATGTEIGEVVF 366
GG R V+R + S FP NARLVLEDGS+W A +FGA GT I E+VF
Sbjct: 24 GGGFRVSVIRCSTSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVF 83
Query: 367 NTSLSGYQEIMTDPSYKGQFVAFTCPHIGNVGINLEDMESTKCHLGAIIVRDLS 528
NTSL+GYQEI+TDPSY GQFV T P IGN G+N +D ES +C L +++R+LS
Sbjct: 84 NTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDEESGQCFLTGLVIRNLS 137
>ref|NP_566824.1| carbamoyl-phosphate synthase [glutamine-hydrolyzing]
(glutamine-dependent carbamoyl-phosphate synthase) small
subunit [Arabidopsis thaliana]
gi|9294479|dbj|BAB02698.1| carbamoyl-phosphate
synthetase small subunit [Arabidopsis thaliana]
gi|15028109|gb|AAK76678.1| putative carbamoyl phosphate
synthetase small subunit [Arabidopsis thaliana]
gi|19310631|gb|AAL85046.1| putative carbamoyl phosphate
synthetase small subunit [Arabidopsis thaliana]
Length = 430
Score = 120 bits (302), Expect = 8e-27
Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 10/114 (8%)
Frame = +1
Query: 217 GGRARSLVVRAAASASPFPKR----------NARLVLEDGSVWHATAFGATGTEIGEVVF 366
GG R V+R + S FP NARLVLEDGS+W A +FGA GT I E+VF
Sbjct: 26 GGGFRVSVIRCSTSPLTFPTSGVVEKPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVF 85
Query: 367 NTSLSGYQEIMTDPSYKGQFVAFTCPHIGNVGINLEDMESTKCHLGAIIVRDLS 528
NTSL+GYQEI+TDPSY GQFV T P IGN G+N +D ES +C L +++R+LS
Sbjct: 86 NTSLTGYQEILTDPSYAGQFVLMTNPQIGNTGVNPDDEESGQCFLTGLVIRNLS 139
>ref|NP_459071.1| carbamoyl-phosphate synthetase, glutamine-hydrolysing small subunit
[Salmonella typhimurium LT2]
gi|20143902|sp|P14845|CARA_SALTY Carbamoyl-phosphate
synthase small chain (Carbamoyl-phosphate synthetase
glutamine chain) gi|16418562|gb|AAL19030.1|
carbamoyl-phosphate synthetase, glutamine-hydrolysing
small subunit [Salmonella typhimurium LT2]
Length = 382
Score = 106 bits (265), Expect = 2e-22
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +1
Query: 277 RNARLVLEDGSVWHATAFGATGTEIGEVVFNTSLSGYQEIMTDPSYKGQFVAFTCPHIGN 456
++A LVLEDG+ +H A GATG+ +GEVVFNTS++GYQEI+TDPSY Q V T PHIGN
Sbjct: 3 KSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGN 62
Query: 457 VGINLEDMESTKCHLGAIIVRDL 525
VG N D ES++ H +++RDL
Sbjct: 63 VGTNKADEESSQVHAQGLVIRDL 85
