KCC002525A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002525A_C01 KCC002525A_c01
GCGACTTAAACGACCTACGTCGCCTTACTGTGTGCGCGTACGTGTTTGTAGCTGTGAGAT
AGTTTTGTCCGCAGCGTACCCGCAAATAGAATGCTCGCGAGCACTTACACGCCCTGTGGC
GTTCGCCAGTGTGGCAGGCCGCACGGTTGCAGTGCCCAGCAGCTTGGTCGCGCCAGTGGC
AGTCGCTCGGTCGCTGGGGTTGGCGCCCTACGTCCCTGTATGTGAGCCTTCTGCGGCGCT
TCCGGCCTGCCAGCAGCCTAGCTGGGCGTCGTCATGTTCAGACTGCTGCCACTCTCCGTG
CCGACAACCCCAGCTCGGTCGCGCAGCTGGTGCATCAGAATGGAAAGGGGATGAAGGTTA
TTATCGCCGGCGCGGGCATCGGCGGCCTGGTGCTAGCCGTTGCACTTCTGAAGCAGGGCT
TCCAGGTTCAGGTCTTTGAGCGCGACCTGACGGCCATCCGCGGCGAGGGCAAGTACCGTG
GACCCATCCAGGTTCACAGCAATGCGCTCGCTGCGCTGGAGGCTATCGATCCCGAGGTGG
CCGCGGAGGTGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002525A_C01 KCC002525A_c01
         (552 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO34404.1| zeaxanthin epoxidase precursor [Chlamydomonas rei...   183  2e-69
gb|AAO48941.1| zeaxanthin epoxidase precursor [Chlamydomonas sp....   113  1e-24
emb|CAE01570.1| OSJNBa0064H22.20 [Oryza sativa (japonica cultiva...   105  4e-22
dbj|BAB39765.1| zeaxanthin epoxidase [Oryza sativa (japonica cul...   103  2e-21
dbj|BAB11934.1| CpABA1 [Vigna unguiculata]                            100  1e-20

>gb|AAO34404.1| zeaxanthin epoxidase precursor [Chlamydomonas reinhardtii]
           gi|28883201|gb|AAO48940.1| zeaxanthin epoxidase
           precursor [Chlamydomonas reinhardtii]
          Length = 763

 Score =  183 bits (465), Expect(3) = 2e-69
 Identities = 95/97 (97%), Positives = 96/97 (98%)
 Frame = +3

Query: 261 AGRRHVQTAATLRADNPSSVAQLVHQNGKGMKVIIAGAGIGGLVLAVALLKQGFQVQVFE 440
           +GRRHVQTAATLRADNPSSVAQLVHQNGKGMKVIIAGAGIGGLVLAVALLKQGFQVQVFE
Sbjct: 57  SGRRHVQTAATLRADNPSSVAQLVHQNGKGMKVIIAGAGIGGLVLAVALLKQGFQVQVFE 116

Query: 441 RDLTAIRGEGKYRGPIQVHSNALAALEAIDPEVAAEV 551
           RDLTAIRGEGKYRGPIQV SNALAALEAIDPEVAAEV
Sbjct: 117 RDLTAIRGEGKYRGPIQVQSNALAALEAIDPEVAAEV 153

 Score = 90.9 bits (224), Expect(3) = 2e-69
 Identities = 45/50 (90%), Positives = 45/50 (90%)
 Frame = +2

Query: 113 PVAFASVAGRTVAVPSSLVAPVAVARSLGLAPYVPVCEPSAALPACQQPS 262
           P     VAGRTVAVPSSLVAPVAVARSLGLAPYVPVCEPSAALPACQQPS
Sbjct: 8   PCGVRQVAGRTVAVPSSLVAPVAVARSLGLAPYVPVCEPSAALPACQQPS 57

 Score = 31.6 bits (70), Expect(3) = 2e-69
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +1

Query: 91  MLASTYTPCGVRQ 129
           MLASTYTPCGVRQ
Sbjct: 1   MLASTYTPCGVRQ 13

>gb|AAO48941.1| zeaxanthin epoxidase precursor [Chlamydomonas sp. W80]
          Length = 727

 Score =  113 bits (283), Expect = 1e-24
 Identities = 59/92 (64%), Positives = 70/92 (75%)
 Frame = +3

Query: 276 VQTAATLRADNPSSVAQLVHQNGKGMKVIIAGAGIGGLVLAVALLKQGFQVQVFERDLTA 455
           V T A+  A  P+S         + ++V+IAGAGIGGLVLAVAL+K+GF V VFERD+TA
Sbjct: 75  VATRASSVASAPASQPPAADSMKRPLRVLIAGAGIGGLVLAVALIKKGFHVTVFERDMTA 134

Query: 456 IRGEGKYRGPIQVHSNALAALEAIDPEVAAEV 551
           IRGEGKYRGPIQ+ SNAL ALEAIDP +A EV
Sbjct: 135 IRGEGKYRGPIQIQSNALGALEAIDPSIADEV 166

>emb|CAE01570.1| OSJNBa0064H22.20 [Oryza sativa (japonica cultivar-group)]
          Length = 190

 Score =  105 bits (262), Expect = 4e-22
 Identities = 59/107 (55%), Positives = 75/107 (69%), Gaps = 6/107 (5%)
 Frame = +3

Query: 249 ASSLAGRRHVQTAATLR-ADNPSSVAQLVHQNGKGM-----KVIIAGAGIGGLVLAVALL 410
           AS    R   + AA +R AD  +SVAQ     G G      +V++AG GIGGLVLA+A  
Sbjct: 38  ASGKRQRARARVAAAMRPADAAASVAQAASPGGGGEGTRRPRVLVAGGGIGGLVLALAAR 97

Query: 411 KQGFQVQVFERDLTAIRGEGKYRGPIQVHSNALAALEAIDPEVAAEV 551
           ++G++V VFERD++A+RGEG+YRGPIQ+ SNALAALEAID  VA EV
Sbjct: 98  RKGYEVTVFERDMSAVRGEGQYRGPIQIQSNALAALEAIDMSVAEEV 144

>dbj|BAB39765.1| zeaxanthin epoxidase [Oryza sativa (japonica cultivar-group)]
          Length = 626

 Score =  103 bits (256), Expect = 2e-21
 Identities = 58/107 (54%), Positives = 74/107 (68%), Gaps = 6/107 (5%)
 Frame = +3

Query: 249 ASSLAGRRHVQTAATLR-ADNPSSVAQLVHQNGKGM-----KVIIAGAGIGGLVLAVALL 410
           AS    R   + AA +R AD  +SVAQ     G G      +V++AG GIGGLVLA+A  
Sbjct: 38  ASGKRQRARARVAAAMRPADAAASVAQAASPGGGGEGTRRPRVLVAGGGIGGLVLALAAR 97

Query: 411 KQGFQVQVFERDLTAIRGEGKYRGPIQVHSNALAALEAIDPEVAAEV 551
           ++G++V VFERD++A+RGEG+YRGPIQ+ SNALAAL AID  VA EV
Sbjct: 98  RKGYEVTVFERDMSAVRGEGQYRGPIQIQSNALAALAAIDMSVAEEV 144

>dbj|BAB11934.1| CpABA1 [Vigna unguiculata]
          Length = 612

 Score =  100 bits (250), Expect = 1e-20
 Identities = 52/82 (63%), Positives = 64/82 (77%)
 Frame = +3

Query: 306 NPSSVAQLVHQNGKGMKVIIAGAGIGGLVLAVALLKQGFQVQVFERDLTAIRGEGKYRGP 485
           +PSS       + K ++V++AG GIGGLV A+A  K+GF V VFE+DL+AIRGEG+YRGP
Sbjct: 15  SPSSQGGSGAASKKQLRVLVAGGGIGGLVFALAAKKKGFDVVVFEKDLSAIRGEGQYRGP 74

Query: 486 IQVHSNALAALEAIDPEVAAEV 551
           IQ+ SNALAALEAID EVA EV
Sbjct: 75  IQIQSNALAALEAIDSEVAEEV 96



EST assemble image


clone accession position
1 HCL052a05_r AV642450 1 372
2 HCL063h10_r AV643111 1 519
3 MXL070d03_r BP097114 186 555




Chlamydomonas reinhardtii
Kazusa DNA Research Institute