KCC002523A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002523A_C01 KCC002523A_c01
gtaagttgtctgcgtgataaagccagatgccgtcgcttgaagcggcttgttggccggcaa
cgaccggcgaggagttaatcAACGGCGTTGATCTGCCGGTTTGCAAATGTTGCGCTGCAT
CAGCAACCCCTACTGACCCAAAACTGCACACCTACATTATTGAGAAGTGCTGGATGCACT
GGATGCAAAAGGGTCCCTGCGATTCGCAGTTCGTGCTCGAAAGTTCACTTGCCAGTACTT
GTTGCGGGCGCTTTGCTTGCCACGCCACTCCAACAGTCGTAAAACATAATAAAAATGCAG
CAGCTGGCTCAGCGCCGCGTTGTCAAGGGCGCCCCCCGCAGCCCTGCGGTGCACCGCGCG
ACTCATGGAGCGTTGCGCGTGACTCGCAAGCCGGTTGCGCTCGCGGCAGCTGCAACCACA
GCAGCTACCACAGTGGTAGAGCCGGTGCAGACAGATGCAGTGGCTGCGAGCGGCGAGGGC
GCTGTGGCTCCCGCGGTGTCGCCCGCCCCCGCCAGCAACACCTTCCAGTGGCACAGCGAG
TGGTACCCGGTGGGCATCATCGAGGACCTGGACCCCCGGCGGACGCACGCCACGCATCTG
CTGGGCATTCCACTGGCGCTGTGGAAGGATGCGCAGGGCCAGTGGCGCGCCGTGGAGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002523A_C01 KCC002523A_c01
         (659 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_486137.1| cell death suppressor protein [Nostoc sp. PCC 7...    64  2e-09
gb|AAP21408.1| putative cell death suppressor protein [Oryza sat...    56  4e-07
ref|NP_567725.1| Rieske [2Fe-2S] domain-containing protein [Arab...    55  1e-06
pir||T09557 probable Rieske iron-sulfur protein L73G19.30 - Arab...    55  1e-06
ref|NP_849444.1| Rieske [2Fe-2S] domain-containing protein [Arab...    55  1e-06

>ref|NP_486137.1| cell death suppressor protein [Nostoc sp. PCC 7120]
           gi|25354462|pir||AC2068 cell death suppressor protein
           [imported] - Nostoc sp.  (strain PCC 7120)
           gi|17131188|dbj|BAB73796.1| cell death suppressor
           protein [Nostoc sp. PCC 7120]
          Length = 499

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 25/47 (53%), Positives = 30/47 (63%)
 Frame = +1

Query: 517 NTFQWHSEWYPVGIIEDLDPRRTHATHLLGIPLALWKDAQGQWRAVE 657
           N FQW  +WYPV ++E LDP R HA  LLG  + LW+D   QWR  E
Sbjct: 30  NIFQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFE 76

>gb|AAP21408.1| putative cell death suppressor protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 525

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 27/73 (36%), Positives = 37/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 442 PVQTDAVAASGEGAVAPAVSPAPASNTFQWHSEWYPVGIIEDLDPRRTHATHLLGIPLAL 621
           PV   A  A    AV    +PA     F W  +WYPV  + DLD R+ H   ++GI + +
Sbjct: 51  PVSAVAAEAPLPRAVDEKETPAAGEERFDWLDQWYPVAPVRDLDKRKPHGKMVMGISVVV 110

Query: 622 WKD-AQGQWRAVE 657
           W D   G+WR V+
Sbjct: 111 WFDGGGGEWRVVD 123

>ref|NP_567725.1| Rieske [2Fe-2S] domain-containing protein [Arabidopsis thaliana]
           gi|15810259|gb|AAL07017.1| unknown protein [Arabidopsis
           thaliana] gi|15983402|gb|AAL11569.1|AF424575_1
           AT4g25650/L73G19_30 [Arabidopsis thaliana]
          Length = 536

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 391 PVALAAAATTAATTVVEPVQTDAVAASGEGAVAPAVSPAPASNTFQWHSEWYPVGIIEDL 570
           P +L    ++  TT V    + + A S      P     P S+ F W++ WYPV  I DL
Sbjct: 35  PNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDL 94

Query: 571 DPRRTHATHLLGIPLALWKDA-QGQWRAVE 657
           D +  H   ++GI L +W D  + QW+ ++
Sbjct: 95  DKKVPHGKKVMGIDLVVWWDRNEKQWKVMD 124

>pir||T09557 probable Rieske iron-sulfur protein L73G19.30 - Arabidopsis
           thaliana gi|4914457|emb|CAB43696.1| putative protein
           [Arabidopsis thaliana] gi|7269415|emb|CAB81375.1|
           putative protein [Arabidopsis thaliana]
          Length = 548

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 391 PVALAAAATTAATTVVEPVQTDAVAASGEGAVAPAVSPAPASNTFQWHSEWYPVGIIEDL 570
           P +L    ++  TT V    + + A S      P     P S+ F W++ WYPV  I DL
Sbjct: 35  PNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDL 94

Query: 571 DPRRTHATHLLGIPLALWKDA-QGQWRAVE 657
           D +  H   ++GI L +W D  + QW+ ++
Sbjct: 95  DKKVPHGKKVMGIDLVVWWDRNEKQWKVMD 124

>ref|NP_849444.1| Rieske [2Fe-2S] domain-containing protein [Arabidopsis thaliana]
           gi|17065310|gb|AAL32809.1| Unknown protein [Arabidopsis
           thaliana] gi|27311961|gb|AAO00946.1| Unknown protein
           [Arabidopsis thaliana]
          Length = 559

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 391 PVALAAAATTAATTVVEPVQTDAVAASGEGAVAPAVSPAPASNTFQWHSEWYPVGIIEDL 570
           P +L    ++  TT V    + + A S      P     P S+ F W++ WYPV  I DL
Sbjct: 35  PNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDL 94

Query: 571 DPRRTHATHLLGIPLALWKDA-QGQWRAVE 657
           D +  H   ++GI L +W D  + QW+ ++
Sbjct: 95  DKKVPHGKKVMGIDLVVWWDRNEKQWKVMD 124



EST assemble image


clone accession position
1 HCL061g02_r AV642987 1 485
2 HCL051d04_r AV642412 161 659




Chlamydomonas reinhardtii
Kazusa DNA Research Institute