KCC002520A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002520A_C01 KCC002520A_c01
catcaatgtggacgtcgCGCACTCGGAGGTAATCACTATAATATACTGGCTTGTGCCTCA
CCCAGCGACTTGCAACTGCGAAATTATTGCCAGTGTGTTGACTCCGTGCAGCACATCGCA
AGCCACTTACGTATCGCTACACAGCATTGCAAATGCAAACTCGCGGGGTAGCACCTTCAG
CAAGGAAAAGCACTAGCAATGCGTGGGCTCGCCTGCATGCGTCCAACGCGTCGCTGATAG
CGAGAGCGCAGCAGTCAAGCACTGCAACAGCAGCGCCTCAAGCTCAGGAGGTGGCCAAGC
CCGTCCTTCGTCCTGTGCCCACGGCCGGCGCTCCTCAGACGGGTCTGTCGGTGGAGCCCA
GCCAGTACCCCCAGGTCCGTCGCGGCGAGGTGGTCGAGACGCTTCACGGCGTGCGGGTGG
CGGACCCCTACCGCTGGCTGGAGGACCCGGACTCGGAGGAGACACGCGAGTTCGTGGACG
CGCAGAACGCCCTGACGGCCCGTGTGCTGGAGCAGTGTGACACGCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002520A_C01 KCC002520A_c01
         (527 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF17627.1|AC009978_3 T23E18.7 [Arabidopsis thaliana]               75  7e-13
ref|NP_177741.2| prolyl endopeptidase -related [Arabidopsis thal...    75  7e-13
gb|AAL86330.1| putative prolyl endopeptidase [Arabidopsis thaliana]    75  7e-13
ref|NP_173463.1| prolyl endopeptidase -related [Arabidopsis thal...    74  1e-12
pir||F86337 F14O10.2 protein - Arabidopsis thaliana gi|9558588|g...    74  1e-12

>gb|AAF17627.1|AC009978_3 T23E18.7 [Arabidopsis thaliana]
          Length = 650

 Score = 74.7 bits (182), Expect = 7e-13
 Identities = 34/59 (57%), Positives = 44/59 (73%), Gaps = 1/59 (1%)
 Frame = +3

Query: 354 EPSQYPQVRRGE-VVETLHGVRVADPYRWLEDPDSEETREFVDAQNALTARVLEQCDTR 527
           E  QYP  RR + VV+  HGV++ DPYRWLEDPD+EE +EFV +Q  LT  VLE+C+T+
Sbjct: 73  EQLQYPATRRDDSVVDDYHGVKIGDPYRWLEDPDAEEVKEFVQSQVKLTDSVLEKCETK 131

>ref|NP_177741.2| prolyl endopeptidase -related [Arabidopsis thaliana]
          Length = 731

 Score = 74.7 bits (182), Expect = 7e-13
 Identities = 34/59 (57%), Positives = 44/59 (73%), Gaps = 1/59 (1%)
 Frame = +3

Query: 354 EPSQYPQVRRGE-VVETLHGVRVADPYRWLEDPDSEETREFVDAQNALTARVLEQCDTR 527
           E  QYP  RR + VV+  HGV++ DPYRWLEDPD+EE +EFV +Q  LT  VLE+C+T+
Sbjct: 9   EQLQYPATRRDDSVVDDYHGVKIGDPYRWLEDPDAEEVKEFVQSQVKLTDSVLEKCETK 67

>gb|AAL86330.1| putative prolyl endopeptidase [Arabidopsis thaliana]
          Length = 757

 Score = 74.7 bits (182), Expect = 7e-13
 Identities = 34/59 (57%), Positives = 44/59 (73%), Gaps = 1/59 (1%)
 Frame = +3

Query: 354 EPSQYPQVRRGE-VVETLHGVRVADPYRWLEDPDSEETREFVDAQNALTARVLEQCDTR 527
           E  QYP  RR + VV+  HGV++ DPYRWLEDPD+EE +EFV +Q  LT  VLE+C+T+
Sbjct: 35  EQLQYPATRRDDSVVDDYHGVKIGDPYRWLEDPDAEEVKEFVQSQVKLTDSVLEKCETK 93

>ref|NP_173463.1| prolyl endopeptidase -related [Arabidopsis thaliana]
          Length = 731

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = +3

Query: 354 EPSQYPQVRRGE-VVETLHGVRVADPYRWLEDPDSEETREFVDAQNALTARVLEQCDTR 527
           E  QYP  RR E VVE  HGV+V+DPYRWLEDPD+EE +EFV+ Q  L+  VL+ C+T+
Sbjct: 9   ERLQYPTARRDESVVEDYHGVKVSDPYRWLEDPDAEEVKEFVEKQVQLSDSVLKSCETK 67

>pir||F86337 F14O10.2 protein - Arabidopsis thaliana
           gi|9558588|gb|AAF88151.1|AC026234_2 Contains similarity
           to a rPOP protein from Rattus norvegicus gi|3043760 and
           is a member of the prolyl oligopeptidase family
           PF|00326.  ESTs gb|AA651190, gb|H36145 come from this
           gene. [Arabidopsis thaliana]
          Length = 739

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = +3

Query: 354 EPSQYPQVRRGE-VVETLHGVRVADPYRWLEDPDSEETREFVDAQNALTARVLEQCDTR 527
           E  QYP  RR E VVE  HGV+V+DPYRWLEDPD+EE +EFV+ Q  L+  VL+ C+T+
Sbjct: 9   ERLQYPTARRDESVVEDYHGVKVSDPYRWLEDPDAEEVKEFVEKQVQLSDSVLKSCETK 67



EST assemble image


clone accession position
1 HCL050d10_r AV642361 1 527
2 MXL025d05_r BP094592 18 413




Chlamydomonas reinhardtii
Kazusa DNA Research Institute