Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002507A_C01 KCC002507A_c01
(900 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175645.1| coatomer protein complex, subunit beta 2 (beta ... 441 e-123
ref|NP_178116.2| coatomer protein complex, subunit beta 2 (beta ... 439 e-122
ref|NP_188219.2| coatomer protein complex, subunit beta 2 (beta ... 439 e-122
ref|NP_850592.1| coatomer protein complex, subunit beta 2 (beta ... 439 e-122
gb|AAG52258.1|AC011717_26 putative coatomer protein complex, sub... 426 e-118
>ref|NP_175645.1| coatomer protein complex, subunit beta 2 (beta prime), putative
[Arabidopsis thaliana] gi|25312791|pir||G96563 probable
coatomer complex subunit, 33791-27676 [imported] -
Arabidopsis thaliana
gi|12323125|gb|AAG51545.1|AC037424_10 coatomer complex
subunit, putative; 33791-27676 [Arabidopsis thaliana]
Length = 926
Score = 441 bits (1135), Expect = e-123
Identities = 192/253 (75%), Positives = 228/253 (89%)
Frame = +2
Query: 140 MPLRLDIKKQLVQRTDRVKGVDVHPTEPWVLANLYNGNVYIWNYLDQTLVKSFEVTELPV 319
MPLRL+IK++L QR++RVK VD+HPTEPW+LA+LY+G + IWNY Q + KSFEVTELPV
Sbjct: 1 MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPV 60
Query: 320 RAAKFVSRKQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDD 499
R+AKFV+RKQWV+ G+DDM+IRVYNYNTMDKVK FEAH+DYIRC+ + PT+PY+L+SSDD
Sbjct: 61 RSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 500 MLIKLWDWEKGWNCVQVFEGHSHYVMQVSFNPKDTNTFASASLDRTIKVWSLGQPTPNFT 679
MLIKLWDWEKGW C Q+FEGHSHYVMQV+FNPKDTNTFASASLDRTIK+W+LG P PNFT
Sbjct: 121 MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 680 LEGHEKGVNCVDYFNGGDRPFLISGADDKLVKVWDYQTKACVTTLEGHQHNISSAIFHPE 859
L+ H+KGVNCVDYF GGD+P+LI+G+DD KVWDYQTK+CV TLEGH HN+S+ FHPE
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 860 LPIIVTGSEDGTV 898
LPII+TGSEDGTV
Sbjct: 241 LPIIITGSEDGTV 253
Score = 54.3 bits (129), Expect = 3e-06
Identities = 22/58 (37%), Positives = 36/58 (61%)
Frame = +2
Query: 344 KQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDDMLIKLW 517
K ++ITGSDD +V++Y T V+T E HT + + P +P I+T S+D +++W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>ref|NP_178116.2| coatomer protein complex, subunit beta 2 (beta prime), putative
[Arabidopsis thaliana] gi|25312792|pir||C96831
hypothetical protein F18B13.7 [imported] - Arabidopsis
thaliana gi|5902363|gb|AAD55465.1|AC009322_5 Putative
coatomer protein complex, subunit beta 2 (beta prime)
[Arabidopsis thaliana] gi|20259354|gb|AAM14001.1|
putative coatomer protein complex, subunit beta 2 (beta
prime) [Arabidopsis thaliana]
Length = 920
Score = 439 bits (1130), Expect = e-122
Identities = 191/253 (75%), Positives = 227/253 (89%)
Frame = +2
Query: 140 MPLRLDIKKQLVQRTDRVKGVDVHPTEPWVLANLYNGNVYIWNYLDQTLVKSFEVTELPV 319
MPLRL+IK++ QR++RVK VD+HPTEPW+LA+LY+G + IWNY QT+VKSF+VTELPV
Sbjct: 1 MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPV 60
Query: 320 RAAKFVSRKQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDD 499
R+AKF++RKQWV+ G+DDMFIRVYNYNTMDK+K FEAH DYIRC+ + PT+PY+L+SSDD
Sbjct: 61 RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDD 120
Query: 500 MLIKLWDWEKGWNCVQVFEGHSHYVMQVSFNPKDTNTFASASLDRTIKVWSLGQPTPNFT 679
MLIKLWDWEKGW C Q+FEGHSHYVMQV+FNPKDTNTFASASLDRTIK+W+LG P PNFT
Sbjct: 121 MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 680 LEGHEKGVNCVDYFNGGDRPFLISGADDKLVKVWDYQTKACVTTLEGHQHNISSAIFHPE 859
L+ H KGVNCVDYF GGD+P+LI+G+DD KVWDYQTK+CV TLEGH HN+S+ FHPE
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 860 LPIIVTGSEDGTV 898
LPII+TGSEDGTV
Sbjct: 241 LPIIITGSEDGTV 253
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/58 (37%), Positives = 37/58 (62%)
Frame = +2
Query: 344 KQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDDMLIKLW 517
K ++ITGSDD +V++Y T V+T E HT + ++ P +P I+T S+D +++W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>ref|NP_188219.2| coatomer protein complex, subunit beta 2 (beta prime), putative
[Arabidopsis thaliana] gi|30683868|ref|NP_850593.1|
coatomer protein complex, subunit beta 2 (beta prime),
putative [Arabidopsis thaliana]
Length = 918
Score = 439 bits (1129), Expect = e-122
Identities = 191/253 (75%), Positives = 225/253 (88%)
Frame = +2
Query: 140 MPLRLDIKKQLVQRTDRVKGVDVHPTEPWVLANLYNGNVYIWNYLDQTLVKSFEVTELPV 319
MPLRLDIK++ QR++RVK VD+HPTEPW+LA+LY+G V IWNY QT+ KSFEVTELPV
Sbjct: 1 MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPV 60
Query: 320 RAAKFVSRKQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDD 499
R+AKF+ RKQWV+ G+DDM+IRVYNYNTMDKVK FEAH+DYIRC+ + PT+PY+L+SSDD
Sbjct: 61 RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 500 MLIKLWDWEKGWNCVQVFEGHSHYVMQVSFNPKDTNTFASASLDRTIKVWSLGQPTPNFT 679
MLIKLWDWE GW C Q+FEGHSHYVMQV FNPKDTNTFASASLDRTIK+W+LG P PNFT
Sbjct: 121 MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 680 LEGHEKGVNCVDYFNGGDRPFLISGADDKLVKVWDYQTKACVTTLEGHQHNISSAIFHPE 859
L+ H+KGVNCVDYF GGD+P+LI+G+DD KVWDYQTK+CV TL+GH HN+S+ FHPE
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 860 LPIIVTGSEDGTV 898
LPII+TGSEDGTV
Sbjct: 241 LPIIITGSEDGTV 253
Score = 53.1 bits (126), Expect = 6e-06
Identities = 21/58 (36%), Positives = 36/58 (61%)
Frame = +2
Query: 344 KQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDDMLIKLW 517
K ++ITGSDD +V++Y T V+T + HT + + P +P I+T S+D +++W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>ref|NP_850592.1| coatomer protein complex, subunit beta 2 (beta prime), putative
[Arabidopsis thaliana] gi|21539583|gb|AAM53344.1|
putative coatomer complex subunit [Arabidopsis thaliana]
gi|24899747|gb|AAN65088.1| putative coatomer complex
subunit [Arabidopsis thaliana]
Length = 909
Score = 439 bits (1129), Expect = e-122
Identities = 191/253 (75%), Positives = 225/253 (88%)
Frame = +2
Query: 140 MPLRLDIKKQLVQRTDRVKGVDVHPTEPWVLANLYNGNVYIWNYLDQTLVKSFEVTELPV 319
MPLRLDIK++ QR++RVK VD+HPTEPW+LA+LY+G V IWNY QT+ KSFEVTELPV
Sbjct: 1 MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPV 60
Query: 320 RAAKFVSRKQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDD 499
R+AKF+ RKQWV+ G+DDM+IRVYNYNTMDKVK FEAH+DYIRC+ + PT+PY+L+SSDD
Sbjct: 61 RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD 120
Query: 500 MLIKLWDWEKGWNCVQVFEGHSHYVMQVSFNPKDTNTFASASLDRTIKVWSLGQPTPNFT 679
MLIKLWDWE GW C Q+FEGHSHYVMQV FNPKDTNTFASASLDRTIK+W+LG P PNFT
Sbjct: 121 MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT 180
Query: 680 LEGHEKGVNCVDYFNGGDRPFLISGADDKLVKVWDYQTKACVTTLEGHQHNISSAIFHPE 859
L+ H+KGVNCVDYF GGD+P+LI+G+DD KVWDYQTK+CV TL+GH HN+S+ FHPE
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 860 LPIIVTGSEDGTV 898
LPII+TGSEDGTV
Sbjct: 241 LPIIITGSEDGTV 253
Score = 53.1 bits (126), Expect = 6e-06
Identities = 21/58 (36%), Positives = 36/58 (61%)
Frame = +2
Query: 344 KQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDDMLIKLW 517
K ++ITGSDD +V++Y T V+T + HT + + P +P I+T S+D +++W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>gb|AAG52258.1|AC011717_26 putative coatomer protein complex, subunit beta 2 (beta prime);
18270-12231 [Arabidopsis thaliana]
Length = 913
Score = 426 bits (1094), Expect = e-118
Identities = 184/245 (75%), Positives = 219/245 (89%)
Frame = +2
Query: 164 KQLVQRTDRVKGVDVHPTEPWVLANLYNGNVYIWNYLDQTLVKSFEVTELPVRAAKFVSR 343
++ QR++RVK VD+HPTEPW+LA+LY+G + IWNY QT+VKSF+VTELPVR+AKF++R
Sbjct: 2 RKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIAR 61
Query: 344 KQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCITISPTMPYILTSSDDMLIKLWDW 523
KQWV+ G+DDMFIRVYNYNTMDK+K FEAH DYIRC+ + PT+PY+L+SSDDMLIKLWDW
Sbjct: 62 KQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDW 121
Query: 524 EKGWNCVQVFEGHSHYVMQVSFNPKDTNTFASASLDRTIKVWSLGQPTPNFTLEGHEKGV 703
EKGW C Q+FEGHSHYVMQV+FNPKDTNTFASASLDRTIK+W+LG P PNFTL+ H KGV
Sbjct: 122 EKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGV 181
Query: 704 NCVDYFNGGDRPFLISGADDKLVKVWDYQTKACVTTLEGHQHNISSAIFHPELPIIVTGS 883
NCVDYF GGD+P+LI+G+DD KVWDYQTK+CV TLEGH HN+S+ FHPELPII+TGS
Sbjct: 182 NCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGS 241
Query: 884 EDGTV 898
EDGTV
Sbjct: 242 EDGTV 246
Score = 78.6 bits (192), Expect = 1e-13
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Frame = +2
Query: 152 LDIKKQLVQRTDRVKGVDVHPTEPWVLANLYNGNVYIWNYLDQTL-VKSFEVTELPVRAA 328
+D K D ++ V VHPT P+VL++ + + +W++ L + FE V
Sbjct: 82 MDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQV 141
Query: 329 KFVSR-KQWVITGSDDMFIRVYNYNTMDKVKTFEAHTDYIRCIT--ISPTMPYILTSSDD 499
F + + S D I+++N + D T +AH + C+ PY++T SDD
Sbjct: 142 TFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDD 201
Query: 500 MLIKLWDWEKGWNCVQVFEGHSHYVMQVSFNPKDTNTFASASLDRTIKVWSLG----QPT 667
K+WD++ +CVQ EGH+H V VSF+P + + S D T+++W + T
Sbjct: 202 HTAKVWDYQTK-SCVQTLEGHTHNVSAVSFHP-ELPIIITGSEDGTVRIWHATTYRLENT 259
Query: 668 PNFTLE-----GHEKG 700
N+ LE GH KG
Sbjct: 260 LNYGLERVWAIGHIKG 275
