Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002468A_C01 KCC002468A_c01
(626 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199332.2| cyclin family [Arabidopsis thaliana] 86 4e-16
ref|NP_193695.2| cyclin family [Arabidopsis thaliana] gi|2645010... 81 1e-14
dbj|BAB11392.1| contains similarity to cyclin~gene_id:K18C1.7 [A... 80 2e-14
gb|AAH44435.1| similar to cyclin T1 [Danio rerio] 73 3e-12
gb|AAH57477.1| Unknown (protein for IMAGE:5612747) [Danio rerio] 73 4e-12
>ref|NP_199332.2| cyclin family [Arabidopsis thaliana]
Length = 579
Score = 85.9 bits (211), Expect = 4e-16
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +2
Query: 176 YFTRAQLEAHNPSRKEGIDGATEARWRTTTSRLVKTSIKTLKLPDWVYETAMNYINRFFL 355
YF R ++E ++PSR +GID E R + ++ LK+P TA+ + +RFF
Sbjct: 34 YFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFF 93
Query: 356 TRSIAKNDRHCVVGGAILLASKVQESPRPVQD---VAYVLLQAKNANKQQKQKQAPDQTT 526
+S AKNDR + + LA KV+E+PRP++D V+Y ++ K+ QK KQ +
Sbjct: 94 RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIKQ---KEV 150
Query: 527 LEQFKDAVVLAEQAMLFAVNFNLNV 601
EQ K+ ++ E+ +L + F+LNV
Sbjct: 151 YEQQKELILNGEKIVLSTLGFDLNV 175
>ref|NP_193695.2| cyclin family [Arabidopsis thaliana] gi|26450105|dbj|BAC42172.1|
unknown protein [Arabidopsis thaliana]
Length = 541
Score = 81.3 bits (199), Expect = 1e-14
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = +2
Query: 176 YFTRAQLEAHNPSRKEGIDGATEARWRTTTSRLVKTSIKTLKLPDWVYETAMNYINRFFL 355
YF R ++E ++PSR + ID E R + ++ LK+P TA+ + +RFF+
Sbjct: 34 YFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFI 93
Query: 356 TRSIAKNDRHCVVGGAILLASKVQESPRPVQD---VAYVLLQAKNANKQQKQKQAPDQTT 526
+S A+NDR + + LA KV+E+PRP++D V+Y ++ K+ QK KQ +
Sbjct: 94 RQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQ---KEV 150
Query: 527 LEQFKDAVVLAEQAMLFAVNFNLNV 601
EQ K+ ++ E+ +L + F+ NV
Sbjct: 151 YEQQKELILNGEKIVLSTLGFDFNV 175
>dbj|BAB11392.1| contains similarity to cyclin~gene_id:K18C1.7 [Arabidopsis
thaliana]
Length = 583
Score = 80.1 bits (196), Expect = 2e-14
Identities = 51/149 (34%), Positives = 82/149 (54%), Gaps = 7/149 (4%)
Frame = +2
Query: 176 YFTRAQLEAHNPSRKEGIDGATEARWRTTTSRLVKTSIKTLKL----PDWVYETAMNYIN 343
YF R ++E ++PSR +GID E R + ++ LK+ P TA+ + +
Sbjct: 34 YFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVFPISPQVTIATAIIFCH 93
Query: 344 RFFLTRSIAKNDRHCVVGGAILLASKVQESPRPVQD---VAYVLLQAKNANKQQKQKQAP 514
RFF +S AKNDR + + LA KV+E+PRP++D V+Y ++ K+ QK KQ
Sbjct: 94 RFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIKQ-- 151
Query: 515 DQTTLEQFKDAVVLAEQAMLFAVNFNLNV 601
+ EQ K+ ++ E+ +L + F+LNV
Sbjct: 152 -KEVYEQQKELILNGEKIVLSTLGFDLNV 179
>gb|AAH44435.1| similar to cyclin T1 [Danio rerio]
Length = 679
Score = 73.2 bits (178), Expect = 3e-12
Identities = 47/152 (30%), Positives = 80/152 (51%), Gaps = 3/152 (1%)
Frame = +2
Query: 167 NTKYFTRAQLEAHNPSRKEGIDGATEARWRTTTSRLVKTSIKTLKLPDWVYETAMNYINR 346
N YFTR Q+E ++PSR+ G+D E +R + L++ + L + TA+ Y++R
Sbjct: 18 NKWYFTREQIE-NSPSRRAGLDPDKELLYRQQAANLLQDMGQRLNVSQLTINTAIVYMHR 76
Query: 347 FFLTRSIAKNDRHCVVGGAILLASKVQESPRPVQDVAYVLLQAKNANKQQKQKQAPDQTT 526
F++ +S + R+ + A+ LA+KV+E PR ++ V V N Q T
Sbjct: 77 FYMVQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVTHAC--LNPQDPSPDTRSDTY 134
Query: 527 LEQFKDAVVLAEQAMLFAVNFNLNVE---THV 613
L+Q +D V+L E +L + F + ++ THV
Sbjct: 135 LQQAQDLVIL-ESIILQTLGFEITIDHPHTHV 165
>gb|AAH57477.1| Unknown (protein for IMAGE:5612747) [Danio rerio]
Length = 683
Score = 72.8 bits (177), Expect = 4e-12
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
Frame = +2
Query: 167 NTKYFTRAQLEAHNPSRKEGIDGATEARWRTTTSRLVKTSIKTLKLPDWVYETAMNYINR 346
N YFTR Q+E ++PSR+ G+D E +R + L++ + L + TA+ Y++R
Sbjct: 22 NKWYFTREQIE-NSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHR 80
Query: 347 FFLTRSIAKNDRHCVVGGAILLASKVQESPRPVQDVAYVLLQAKNANKQQKQKQAPDQTT 526
F++ +S + R + A+ LA+KV+E PR ++ V V N Q T
Sbjct: 81 FYMVQSFTRFHRDVIAPAALFLAAKVEEQPRKLEHVIKVTHAC--LNPQDPSPDTRSDTY 138
Query: 527 LEQFKDAVVLAEQAMLFAVNFNLNVE---THV 613
L+Q +D V+L E +L + F + ++ THV
Sbjct: 139 LQQAQDLVIL-ESIILQTLGFEITIDHPHTHV 169
