KCC002462A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002462A_C01 KCC002462A_c01
caaccctcccgCAGACACGTATACCATAGGTCCGCTCTCGGTCCTCAGGAAGGGGTGTTG
GCTAGTCTGAAGTCTGGAAATCAGCAAGAAGGACGCCGTGCAGGTGCAACAAAGAATGAA
ATAGGTACTCGAATATAAATACGTGCAGTCTAGCAGCTCGGAGGTGACAGCTGCGCACAA
TGGGAGTCACGGACGAACTCTTGCCAGCTGCTGTGCTCCGGCAGATTGGAGATAAGCTTT
ATGAAAAGCGAAAGGTTGCGGCGCTGGAAGTGGAGCAACTCATCAAGCGGCTCGCGGCAC
AGAACGATCAACACCGCATTCGGCTGACAGTTGACAAGCTCATCAGCGACTATGCATTTT
CAAGTCAGGCCAACCACCGCAAGGGCGCCCTCCTGTGCCTGGCGGCCAGTGCGGTGGGCC
TGGGGGACCCCACAGAGGTGCACCTGAGGCAGATCGTGCCGCCCGTGCTGGCGTCTTTCA
CAGACCAGGACGCGCGCGTGCGCTACTACGCCTGTGAGGCGCTGTACAACATCGCCAAGG
TGGCTCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002462A_C01 KCC002462A_c01
         (548 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAN05340.1| Unknown protein [Oryza sativa (japonica cultivar-...   140  9e-33
pir||H84427 hypothetical protein At2g01690 [imported] - Arabidop...   138  6e-32
ref|NP_565275.1| expressed protein [Arabidopsis thaliana] gi|201...   138  6e-32
emb|CAD60738.1| unnamed protein product [Podospora anserina]          124  1e-27
ref|XP_331185.1| hypothetical protein [Neurospora crassa] gi|289...   120  1e-26

>gb|AAN05340.1| Unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 682

 Score =  140 bits (354), Expect = 9e-33
 Identities = 70/117 (59%), Positives = 84/117 (70%)
 Frame = +3

Query: 198 LLPAAVLRQIGDKLYEKRKVAALEVEQLIKRLAAQNDQHRIRLTVDKLISDYAFSSQANH 377
           ++P AVLR + DKLYEKRK AALE+E ++K+LA   +  +I   +  L +D+  S QANH
Sbjct: 8   IIPGAVLRNLSDKLYEKRKNAALEIEGIVKQLATSGEHDKISAVIALLTNDFTMSPQANH 67

Query: 378 RKGALLCLAASAVGLGDPTEVHLRQIVPPVLASFTDQDARVRYYACEALYNIAKVAR 548
           RKG L+ LAA  VGL      HL QIVPPVL SF DQD+RVRYYACEALYNIAKV R
Sbjct: 68  RKGGLIGLAAVTVGLTSEAAQHLEQIVPPVLTSFLDQDSRVRYYACEALYNIAKVVR 124

>pir||H84427 hypothetical protein At2g01690 [imported] - Arabidopsis thaliana
          Length = 760

 Score =  138 bits (347), Expect = 6e-32
 Identities = 69/116 (59%), Positives = 85/116 (72%)
 Frame = +3

Query: 201 LPAAVLRQIGDKLYEKRKVAALEVEQLIKRLAAQNDQHRIRLTVDKLISDYAFSSQANHR 380
           +PAAV R + DKLYEKRK AALE+E ++K L +  D  +I   ++ LI ++A S QANHR
Sbjct: 8   IPAAVHRNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHR 67

Query: 381 KGALLCLAASAVGLGDPTEVHLRQIVPPVLASFTDQDARVRYYACEALYNIAKVAR 548
           KG L+ LAA  VGL      +L QIVPPV+ SF+DQD+RVRYYACEALYNIAKV R
Sbjct: 68  KGGLIGLAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAKVVR 123

>ref|NP_565275.1| expressed protein [Arabidopsis thaliana] gi|20197546|gb|AAD12702.2|
           expressed protein [Arabidopsis thaliana]
          Length = 743

 Score =  138 bits (347), Expect = 6e-32
 Identities = 69/116 (59%), Positives = 85/116 (72%)
 Frame = +3

Query: 201 LPAAVLRQIGDKLYEKRKVAALEVEQLIKRLAAQNDQHRIRLTVDKLISDYAFSSQANHR 380
           +PAAV R + DKLYEKRK AALE+E ++K L +  D  +I   ++ LI ++A S QANHR
Sbjct: 8   IPAAVHRNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHR 67

Query: 381 KGALLCLAASAVGLGDPTEVHLRQIVPPVLASFTDQDARVRYYACEALYNIAKVAR 548
           KG L+ LAA  VGL      +L QIVPPV+ SF+DQD+RVRYYACEALYNIAKV R
Sbjct: 68  KGGLIGLAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAKVVR 123

>emb|CAD60738.1| unnamed protein product [Podospora anserina]
          Length = 927

 Score =  124 bits (310), Expect = 1e-27
 Identities = 62/113 (54%), Positives = 83/113 (72%), Gaps = 1/113 (0%)
 Frame = +3

Query: 213 VLRQIGDKLYEKRKVAALEVEQLIKRLAAQNDQHRIRLTVDKLISDYAFSSQANH-RKGA 389
           + R + DKLY+KRKV AL++E++I+ + A+ D  RI   +D+L +DYA++    H R G 
Sbjct: 5   IQRALNDKLYDKRKVGALDLERVIREVVAKQDNARIEAILDQLCNDYAYAVHQPHARNGG 64

Query: 390 LLCLAASAVGLGDPTEVHLRQIVPPVLASFTDQDARVRYYACEALYNIAKVAR 548
           L+ LAA+A+ LG     +L  IVPPVLA FTDQDARVRYYACEA+YNIAKVA+
Sbjct: 65  LIGLAAAAIALGSELARYLEVIVPPVLACFTDQDARVRYYACEAMYNIAKVAK 117

>ref|XP_331185.1| hypothetical protein [Neurospora crassa] gi|28920976|gb|EAA30301.1|
           hypothetical protein [Neurospora crassa]
          Length = 941

 Score =  120 bits (301), Expect = 1e-26
 Identities = 61/113 (53%), Positives = 81/113 (70%), Gaps = 1/113 (0%)
 Frame = +3

Query: 213 VLRQIGDKLYEKRKVAALEVEQLIKRLAAQNDQHRIRLTVDKLISDYAFSSQANH-RKGA 389
           + R + DKLY+KRK+ AL++E+ I+ L A  D  +I   +D+L +DYA++    H R G 
Sbjct: 5   IQRFLNDKLYDKRKIGALDLERTIRELIAAKDYAKIEAILDQLCNDYAYAVHQPHARNGG 64

Query: 390 LLCLAASAVGLGDPTEVHLRQIVPPVLASFTDQDARVRYYACEALYNIAKVAR 548
           L+ LAA+A+ LG     +L  IVPPVLA FTDQDARVRYYACEA+YNIAKVA+
Sbjct: 65  LIGLAAAAIALGPELPKYLEVIVPPVLACFTDQDARVRYYACEAMYNIAKVAK 117



EST assemble image


clone accession position
1 HCL040b02_r AV641780 1 548
2 MXL036c04_r BP095123 12 505
3 HCL072d10_r AV643596 25 524




Chlamydomonas reinhardtii
Kazusa DNA Research Institute