KCC002444A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002444A_C01 KCC002444A_c01
gttgataTAGAATGTCGCTACGTAACCTGATCTTAGCTGACAACACAGGAAGCGGAAGTG
CTTAAACATTTAGACTGCGTGGAACGCTGCGTTAGTATCCAGCCATGTCGCAAGGACACA
GGGATGCGGGTGCTGCGGCATGCCGGACGATAATCGTCACCAACCATTGCCCGCCCATAA
TGCGGAAACGCGACATATGGCGTGTGGACCAGTTCCACCTGCTTAGGAAGGTTGGAAGTG
GATATGCATCCACCGTGTACCTTGGGACGTGTCGGACGTCAGGAAACCAGGTCGCGGTGA
AGCTGTATCATAAGCAAAAACTGAGTGAGCTGAATCATTTCCAAGTCGCTCGCGAAATTA
CCATTCATTCCTCACTTGATCACAAGAACATCATCCAACTGTGGGCGGCCTTTGAGGACC
AATATGGCATCTACCTGGTGTTTGAGTACGCAAGCAAGGGCGACGTGTTCACGGAGGTGG
AGCGGAGAGGTGGTCAACTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002444A_C01 KCC002444A_c01
         (500 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF97501.1|AF199021_1 CALK protein [Chlamydomonas reinhardtii]     273  7e-73
ref|NP_585964.1| SER/THR/TYR PROTEIN KINASE [Encephalitozoon cun...    73  2e-12
ref|NP_446201.1| serine/threonine kinase 12 [Rattus norvegicus] ...    69  3e-11
gb|AAP50960.1| putative aurora-related kinase [Oryza sativa (jap...    69  4e-11
ref|NP_569972.1| CG4290-PA [Drosophila melanogaster] gi|7290249|...    68  6e-11

>gb|AAF97501.1|AF199021_1 CALK protein [Chlamydomonas reinhardtii]
          Length = 769

 Score =  273 bits (699), Expect = 7e-73
 Identities = 132/132 (100%), Positives = 132/132 (100%)
 Frame = +3

Query: 105 MSQGHRDAGAAACRTIIVTNHCPPIMRKRDIWRVDQFHLLRKVGSGYASTVYLGTCRTSG 284
           MSQGHRDAGAAACRTIIVTNHCPPIMRKRDIWRVDQFHLLRKVGSGYASTVYLGTCRTSG
Sbjct: 1   MSQGHRDAGAAACRTIIVTNHCPPIMRKRDIWRVDQFHLLRKVGSGYASTVYLGTCRTSG 60

Query: 285 NQVAVKLYHKQKLSELNHFQVAREITIHSSLDHKNIIQLWAAFEDQYGIYLVFEYASKGD 464
           NQVAVKLYHKQKLSELNHFQVAREITIHSSLDHKNIIQLWAAFEDQYGIYLVFEYASKGD
Sbjct: 61  NQVAVKLYHKQKLSELNHFQVAREITIHSSLDHKNIIQLWAAFEDQYGIYLVFEYASKGD 120

Query: 465 VFTEVERRGGQL 500
           VFTEVERRGGQL
Sbjct: 121 VFTEVERRGGQL 132

>ref|NP_585964.1| SER/THR/TYR PROTEIN KINASE [Encephalitozoon cuniculi]
           gi|19069100|emb|CAD25568.1| SER/THR/TYR PROTEIN KINASE
           [Encephalitozoon cuniculi]
          Length = 272

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 38/103 (36%), Positives = 61/103 (58%), Gaps = 1/103 (0%)
 Frame = +3

Query: 192 DIWRVDQFHLLRKVGSGYASTVYLGTCRTSGNQVAVKLYHKQKLSELNHF-QVAREITIH 368
           + W +D+F + R +G G    V+L   R  G  VA+K+   +++  +    Q+ REI IH
Sbjct: 3   EYWTLDRFEIGRLLGRGKFGQVWLAREREKGFIVALKIIPIKEIQTVETARQIRREIEIH 62

Query: 369 SSLDHKNIIQLWAAFEDQYGIYLVFEYASKGDVFTEVERRGGQ 497
           S+L H NI++++  F D+  IYL+ EYA KG+ F  +  RGG+
Sbjct: 63  SNLKHPNILRMYGHFHDKDNIYLILEYAGKGEFFKFLSDRGGK 105

>ref|NP_446201.1| serine/threonine kinase 12 [Rattus norvegicus]
           gi|27805733|sp|O55099|AURB_RAT Serine/threonine protein
           kinase 12 (Aurora- and Ipl1-like midbody-associated
           protein 1) (AIM-1) (Aurora-B) gi|2696088|dbj|BAA23794.1|
           AIM-1 [Rattus norvegicus]
          Length = 343

 Score = 68.9 bits (167), Expect = 3e-11
 Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +3

Query: 183 RKRDIWRVDQFHLLRKVGSGYASTVYLGTCRTSGNQVAVKLYHKQKLSELN-HFQVAREI 359
           + R  + +D F + R +G G    VYL   + S   VA+K+  K ++ +     Q+ REI
Sbjct: 70  QSRQPFTIDNFEIGRPLGKGKFGNVYLAREKKSRFIVALKILFKSQIEKEGVEHQLRREI 129

Query: 360 TIHSSLDHKNIIQLWAAFEDQYGIYLVFEYASKGDVFTEVERRG 491
            I + L H NI+QL+  F DQ  IYL+ EYA +G+++ E+++ G
Sbjct: 130 EIQAHLKHPNILQLYNYFYDQQRIYLILEYAPRGELYKELQKSG 173

>gb|AAP50960.1| putative aurora-related kinase [Oryza sativa (japonica
           cultivar-group)]
          Length = 279

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = +3

Query: 198 WRVDQFHLLRKVGSGYASTVYLGTCRTSGNQVAVKLYHKQKLSELN-HFQVAREITIHSS 374
           W +D F + + +G G    VYL   + SG  VA+K+  K KL +   H  + REI I   
Sbjct: 6   WSMDDFEIGKYIGEGKFGKVYLAREKQSGYVVALKVTFKAKLDKYRFHAHLRREIEIQHG 65

Query: 375 LDHKNIIQLWAAFEDQYGIYLVFEYASKGDVF 470
           LDH N+++L+A F D   + LV EYA++G+++
Sbjct: 66  LDHPNVLRLFAWFHDAERVVLVLEYAARGELY 97

>ref|NP_569972.1| CG4290-PA [Drosophila melanogaster] gi|7290249|gb|AAF45711.1|
           CG4290-PA [Drosophila melanogaster]
          Length = 1398

 Score = 68.2 bits (165), Expect = 6e-11
 Identities = 35/105 (33%), Positives = 62/105 (58%)
 Frame = +3

Query: 177 IMRKRDIWRVDQFHLLRKVGSGYASTVYLGTCRTSGNQVAVKLYHKQKLSELNHFQVARE 356
           +++ ++  RV  + + R +G G  + V L   R + N+VA+K+  K +L + N  +V RE
Sbjct: 129 LLKLKEPMRVGFYDIERTIGKGNFAVVKLARHRITKNEVAIKIIDKSQLDQTNLQKVYRE 188

Query: 357 ITIHSSLDHKNIIQLWAAFEDQYGIYLVFEYASKGDVFTEVERRG 491
           + I   L H +II+L+   E +  IY+V EYAS+G++F  + + G
Sbjct: 189 VEIMKRLKHPHIIKLYQVMETKNMIYIVSEYASQGEIFDYIAKYG 233



EST assemble image


clone accession position
1 HCL036e12_r AV641574 1 500
2 LCL092h09_r AV631378 8 260
3 LCL098h01_r AV631728 12 426
4 MXL020d11_r BP094276 14 499
5 LCL078f10_r AV630427 15 315
6 LCL075e01_r AV630213 26 355




Chlamydomonas reinhardtii
Kazusa DNA Research Institute