Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC002438A_C01 KCC002438A_c01
(514 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_636916.1| conserved hypothetical protein [Xanthomonas cam... 42 0.005
ref|NP_898836.1| cyclin B3 [Mus musculus] gi|29603430|emb|CAD881... 37 0.11
ref|ZP_00007166.1| COG0389: Nucleotidyltransferase/DNA polymeras... 37 0.15
dbj|BAC06974.1| hypothetical protein [Oryza sativa (japonica cul... 35 0.43
ref|ZP_00137634.1| COG2141: Coenzyme F420-dependent N5,N10-methy... 35 0.43
>ref|NP_636916.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913] gi|21112621|gb|AAM40840.1|
conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 756
Score = 42.0 bits (97), Expect = 0.005
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +3
Query: 351 HRRGASPQLLRSQPRGEESAPSATPSGWVSFFATCHPGLEQVVANELLSLG 503
HR + L RS P S+PS +V FFA+C GLE ++A+ELL+LG
Sbjct: 20 HRHRPAVLLPRSPPAARSSSPSIP--AYVKFFASCAKGLEYLLADELLALG 68
>ref|NP_898836.1| cyclin B3 [Mus musculus] gi|29603430|emb|CAD88194.1| cyclin B3 [Mus
musculus]
Length = 1396
Score = 37.4 bits (85), Expect = 0.11
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 350 PSSGWPECLAANHAPPGVLPPQERRHSRSKHFRTNGHEYWADRA 219
P S WP L H PG L Q+++H KH + W D A
Sbjct: 482 PPSQWPSALPKKHISPGELSKQKKQHVSPKHNMEEDSQCWLDSA 525
>ref|ZP_00007166.1| COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA
repair [Rhodobacter sphaeroides]
Length = 534
Score = 37.0 bits (84), Expect = 0.15
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Frame = +1
Query: 250 VLKCLEREC------LRSWGGSTPGGAWFAARHSGQPLEGTA-GEPVPSFCARNQGVKSL 408
VL +E +C +R+ TPG AW ARH+G+ L+G G+ + + S
Sbjct: 124 VLGVVEADCAGLGLTVRAAVADTPGAAWALARHAGRALQGNLNGDAIEQEAHATRSRASR 183
Query: 409 RPAQRPAAGYP----SSPPATRAWSRWWPMSCCHWGSG 510
R P +G P S+P A RA P++ G
Sbjct: 184 RRTFAPPSGGPLGLISAPGALRAALEPLPVAALRLSEG 221
>dbj|BAC06974.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 176
Score = 35.4 bits (80), Expect = 0.43
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 15/90 (16%)
Frame = +1
Query: 265 ERECLRSWGGSTPGGAWFAARHSGQPLEGTAGEPVPSFCARNQGVKSLRPAQR------- 423
+ E L + P ++F AR +P + G + + GV S P +
Sbjct: 10 DEELLPRRSDNLPSASFFHAREEAEPHDAAGGCGHRALLVSSTGVCSRSPPRSLPSCPAS 69
Query: 424 --------PAAGYPSSPPATRAWSRWWPMS 489
P PS+PP T AW WW S
Sbjct: 70 THTLPPPPPGPPPPSTPPTTTAWIWWWTTS 99
>ref|ZP_00137634.1| COG2141: Coenzyme F420-dependent N5,N10-methylene
tetrahydromethanopterin reductase and related
flavin-dependent oxidoreductases [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 171
Score = 35.4 bits (80), Expect = 0.43
Identities = 28/86 (32%), Positives = 33/86 (37%), Gaps = 19/86 (22%)
Frame = -2
Query: 501 PVTTAHWPPPAPGPGGRWR----RRIPSRWALRWAQ-TLHPLVASA-------------- 379
P++ A PPP PG R RR+ R LR Q L P V SA
Sbjct: 54 PISAADLPPPVANPGSRTHTDLLRRLIERETLRLDQLLLRPEVVSAAHWQVIGTVDDAVE 113
Query: 378 EAGDWLPCGALQRLAGVPGGKPCSAR 301
+ DW GA+ PGG S R
Sbjct: 114 QIVDWAAAGAMDGFIAAPGGSVGSLR 139
