KCC002430A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002430A_C01 KCC002430A_c01
GTCGAGCATTTGCCCACTCACCAATAATTAAGGCCCTTGTCACGTTCTTGTTGTGGCAAA
CAACCAAAAATGGTGTCCCTGGGCCTTGAGACGGTGCTGGCGGGCACGCCCTCCAACATC
TGCAAGACCAAGGTGGTTTGCACGCTGGGCCCTAAGTCCCGCAGTGTGGAGGTGCTGGAG
GAGCTGCTGCGCGCTGGAATGAGCGTGGCGCGCTTCAACTTCTCTCACGGCTCGCACGAC
TATCACCAGGAGACCCTTGACAACCTTCGCCAGGCGATGGCCAACACCAAGGTCATGTGC
GCGGCGATGCTGGACACCAAGGGTCCTGAGATCCGCACTGGCACGCTGAAGGACGGCAAG
CCGGTGCAGCTGACCGCGGGCCAGGAGGTGACCATTACCACCGACTACGCGCTGCCCGGT
GACGAGAAGACGATTGCCATGAGCTACAAGAAGCTGGCCCAGGACGTGAAGCCCGGCTCC
CAGATCCTGTGCGCGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002430A_C01 KCC002430A_c01
         (497 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE05763.1| OSJNBa0064G10.14 [Oryza sativa (japonica cultiva...   204  5e-52
ref|NP_194369.1| pyruvate kinase, putative [Arabidopsis thaliana...   202  1e-51
ref|NP_200446.1| pyruvate kinase, putative [Arabidopsis thaliana...   200  7e-51
sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme gi|54206...   200  9e-51
ref|NP_201173.1| pyruvate kinase, putative [Arabidopsis thaliana...   200  9e-51

>emb|CAE05763.1| OSJNBa0064G10.14 [Oryza sativa (japonica cultivar-group)]
          Length = 511

 Score =  204 bits (519), Expect = 5e-52
 Identities = 100/145 (68%), Positives = 120/145 (81%), Gaps = 3/145 (2%)
 Frame = +1

Query: 70  MVSLGLETVLAGTPSN---ICKTKVVCTLGPKSRSVEVLEELLRAGMSVARFNFSHGSHD 240
           M ++ +  +LAG  ++   + KTK+VCTLGP SRSV +LE+LLRAGM+VARFNFSHG+H+
Sbjct: 1   MANIDMGKILAGLENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHE 60

Query: 241 YHQETLDNLRQAMANTKVMCAAMLDTKGPEIRTGTLKDGKPVQLTAGQEVTITTDYALPG 420
           YHQETLDNLRQAM NT V+CA MLDTKGPEIRTG LKDGKP++LT GQE+T+TTDY + G
Sbjct: 61  YHQETLDNLRQAMHNTGVLCAVMLDTKGPEIRTGFLKDGKPIKLTKGQELTVTTDYEIKG 120

Query: 421 DEKTIAMSYKKLAQDVKPGSQILCA 495
           DE  I MSYKKL  DVKPG+ ILCA
Sbjct: 121 DENMITMSYKKLPVDVKPGNVILCA 145

>ref|NP_194369.1| pyruvate kinase, putative [Arabidopsis thaliana]
           gi|4033431|sp|O65595|KPYC_ARATH Probable pyruvate
           kinase, cytosolic isozyme (PK) gi|7434442|pir||T05065
           pyruvate kinase (EC 2.7.1.40) - Arabidopsis thaliana
           gi|2982467|emb|CAA18231.1| pyruvate kinase like protein
           [Arabidopsis thaliana] gi|7269491|emb|CAB79494.1|
           pyruvate kinase like protein [Arabidopsis thaliana]
          Length = 497

 Score =  202 bits (515), Expect = 1e-51
 Identities = 98/124 (79%), Positives = 109/124 (87%)
 Frame = +1

Query: 124 KTKVVCTLGPKSRSVEVLEELLRAGMSVARFNFSHGSHDYHQETLDNLRQAMANTKVMCA 303
           KTK+VCTLGP SRSV ++E+LL AGMSVARFNFSHGS++YHQETLDNLRQAM NT ++CA
Sbjct: 8   KTKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCA 67

Query: 304 AMLDTKGPEIRTGTLKDGKPVQLTAGQEVTITTDYALPGDEKTIAMSYKKLAQDVKPGSQ 483
            MLDTKGPEIRTG LKDGKP+QL  GQE+TI+TDY L GDEKTI MSYKKLAQDV PG  
Sbjct: 68  VMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMV 127

Query: 484 ILCA 495
           ILCA
Sbjct: 128 ILCA 131

>ref|NP_200446.1| pyruvate kinase, putative [Arabidopsis thaliana]
           gi|10177833|dbj|BAB11262.1| pyruvate kinase [Arabidopsis
           thaliana] gi|15450942|gb|AAK96742.1| pyruvate kinase
           [Arabidopsis thaliana] gi|17978781|gb|AAL47384.1|
           pyruvate kinase [Arabidopsis thaliana]
           gi|21592702|gb|AAM64651.1| pyruvate kinase [Arabidopsis
           thaliana]
          Length = 498

 Score =  200 bits (509), Expect = 7e-51
 Identities = 96/124 (77%), Positives = 107/124 (85%)
 Frame = +1

Query: 124 KTKVVCTLGPKSRSVEVLEELLRAGMSVARFNFSHGSHDYHQETLDNLRQAMANTKVMCA 303
           KTK+VCTLGP SRSV ++E+LLRAGM+VARFNFSHGSH+YHQETLDNL QAM NT ++CA
Sbjct: 9   KTKIVCTLGPASRSVPMVEKLLRAGMNVARFNFSHGSHEYHQETLDNLHQAMLNTGILCA 68

Query: 304 AMLDTKGPEIRTGTLKDGKPVQLTAGQEVTITTDYALPGDEKTIAMSYKKLAQDVKPGSQ 483
            MLDTKGPEIRTG LKDGKP+QL  GQE+TI+TDY L GDE TI MSYKKLA DV PG  
Sbjct: 69  VMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDENTICMSYKKLAVDVNPGMV 128

Query: 484 ILCA 495
           ILCA
Sbjct: 129 ILCA 132

>sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme gi|542061|pir||S41379 pyruvate
           kinase (EC 2.7.1.40), cytosolic - common tobacco
           gi|444023|emb|CAA82628.1| pyruvate kinase [Nicotiana
           tabacum]
          Length = 508

 Score =  200 bits (508), Expect = 9e-51
 Identities = 95/124 (76%), Positives = 109/124 (87%)
 Frame = +1

Query: 124 KTKVVCTLGPKSRSVEVLEELLRAGMSVARFNFSHGSHDYHQETLDNLRQAMANTKVMCA 303
           KTK+VCTLGP SRSV ++E+LLRAGM+VARFNFSHGSHDYHQET+DNLRQAM +T ++CA
Sbjct: 19  KTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCA 78

Query: 304 AMLDTKGPEIRTGTLKDGKPVQLTAGQEVTITTDYALPGDEKTIAMSYKKLAQDVKPGSQ 483
            MLDTKGPEIRTG LKD KPVQL  GQE+TI+TDY++ GDE  I MSYKKLA+DVKP S 
Sbjct: 79  VMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSV 138

Query: 484 ILCA 495
           ILCA
Sbjct: 139 ILCA 142

>ref|NP_201173.1| pyruvate kinase, putative [Arabidopsis thaliana]
           gi|10177049|dbj|BAB10461.1| pyruvate kinase [Arabidopsis
           thaliana]
          Length = 510

 Score =  200 bits (508), Expect = 9e-51
 Identities = 98/144 (68%), Positives = 118/144 (81%), Gaps = 2/144 (1%)
 Frame = +1

Query: 70  MVSLGLETVLAGTPSN--ICKTKVVCTLGPKSRSVEVLEELLRAGMSVARFNFSHGSHDY 243
           M ++ +E +L   P++    KTK+VCTLGP SRSV ++E+LL+AGM+VARFNFSHGSH+Y
Sbjct: 1   MSNIDIEGILKELPNDGRTPKTKIVCTLGPASRSVTMIEKLLKAGMNVARFNFSHGSHEY 60

Query: 244 HQETLDNLRQAMANTKVMCAAMLDTKGPEIRTGTLKDGKPVQLTAGQEVTITTDYALPGD 423
           HQETLDNLR AM NT ++ A MLDTKGPEIRTG LKDG P+QL  GQE+TITTDY + GD
Sbjct: 61  HQETLDNLRTAMQNTGILAAVMLDTKGPEIRTGFLKDGNPIQLKEGQEITITTDYDIKGD 120

Query: 424 EKTIAMSYKKLAQDVKPGSQILCA 495
           EKTI+MSYKKL  DVKPG+ ILCA
Sbjct: 121 EKTISMSYKKLPVDVKPGNTILCA 144



EST assemble image


clone accession position
1 HCL086c06_r AV644320 1 578
2 HCL067c01_r AV643299 105 577
3 HCL033f08_r AV641441 105 486
4 MXL010h01_r BP093607 105 422
5 HCL079f07_r AV643986 106 566
6 MXL076c04_r BP097469 123 601




Chlamydomonas reinhardtii
Kazusa DNA Research Institute