KCC002418A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC002418A_C01 KCC002418A_c01
gagcGGTACATACACGCGGAGATAGGTGCTCTGCTTTATTGACAAGGACAGTTGCAAACC
GAACTGACCCCGCGATTGAGAACGTTCCAGCTGAAGCCCCTAAACAGCTCATTTTGTGAG
CGCTATACGTGCGATATGACCGCGCCATCGCTATCTCCGAGTTCGACCGTGGATGGAACG
TTGCCCGCGCCGCGGCCACGCGGATATGTTAAAGAGACCTTGGGCACCGATGCCTCGATC
TTTGTCGTGAAAGTGGGGACGACATCGCTAATGCGACCCGAGCACCAAACCGTCAACCTG
TCCTCCCTCGCCAAGCTGTGCGAGGCCGTCCGGGATCTGCGCAGTCAAGGTCATCACGTG
ATCATCGTGACCAGCGGCGCTGTGGGTGTGGGCGCGCAGCACCTGTCGCTGCCCGGCCCC
GAGCCGCTCCGGAAGCGCGCGCTGGCCGCGGTGGGGCAGGTGCAGCTGATCAAGTACTAT
GAAGACTTnctgggcgcgctg


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC002418A_C01 KCC002418A_c01
         (501 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_440416.1| glutamate 5-kinase [Synechocystis sp. PCC 6803]...    75  3e-13
ref|ZP_00112393.1| COG0263: Glutamate 5-kinase [Nostoc punctiforme]    74  1e-12
sp|Q8YSI2|PROB_ANASP Glutamate 5-kinase (Gamma-glutamyl kinase) ...    72  3e-12
ref|ZP_00074077.1| COG0263: Glutamate 5-kinase [Trichodesmium er...    69  4e-11
ref|NP_682908.1| glutamate 5-kinase [Thermosynechococcus elongat...    65  6e-10

>ref|NP_440416.1| glutamate 5-kinase [Synechocystis sp. PCC 6803]
           gi|2499807|sp|P73071|PROB_SYNY3 Glutamate 5-kinase
           (Gamma-glutamyl kinase) (GK) gi|7434577|pir||S75182
           glutamate 5-kinase (EC 2.7.2.11) - Synechocystis sp.
           (strain PCC 6803) gi|1652172|dbj|BAA17096.1| glutamate
           5-kinase [Synechocystis sp. PCC 6803]
          Length = 375

 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
 Frame = +1

Query: 217 TLGTDASIFVVKVGTTSLMRPEHQTVNLSSLAKLCEAVRDLRSQGHHVIIVTSGAVGVGA 396
           T+       V+K+GT+SL RPE   + LS++A L E V  L  QGH V++V+SGA+GVG 
Sbjct: 2   TMAMQPQTLVIKIGTSSLARPETGQLALSTIAALVETVCKLIGQGHRVVLVSSGAIGVGC 61

Query: 397 QHLSL-PGPEPLR-KRALAAVGQVQLIKYYEDXLGAL 501
             L L   P+ +  K+A+AAVGQ +L++ Y+D   +L
Sbjct: 62  SRLGLTERPKKMALKQAIAAVGQGRLMRTYDDLFSSL 98

>ref|ZP_00112393.1| COG0263: Glutamate 5-kinase [Nostoc punctiforme]
          Length = 367

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
 Frame = +1

Query: 244 VVKVGTTSLMRPEHQTVNLSSLAKLCEAVRDLRSQGHHVIIVTSGAVGVGAQHLSL-PGP 420
           VVK+GT+SL + E   + LS++A L E +  LRSQGH VI+V+SGAVGVG   L L   P
Sbjct: 6   VVKIGTSSLTQAETGQLALSTIATLAETLCHLRSQGHRVILVSSGAVGVGCARLGLTERP 65

Query: 421 EPLR-KRALAAVGQVQLIKYYEDXLGAL 501
             +  K+A+AAVGQ +LI+ Y+D    L
Sbjct: 66  RAIALKQAVAAVGQGRLIRIYDDLFTTL 93

>sp|Q8YSI2|PROB_ANASP Glutamate 5-kinase (Gamma-glutamyl kinase) (GK)
          Length = 378

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 42/88 (47%), Positives = 60/88 (67%), Gaps = 2/88 (2%)
 Frame = +1

Query: 244 VVKVGTTSLMRPEHQTVNLSSLAKLCEAVRDLRSQGHHVIIVTSGAVGVGAQHLSL-PGP 420
           VVK+GT+SL +PE   + LS++A L E +  LR QG+ VI+V+SGAVGVG   L L   P
Sbjct: 15  VVKIGTSSLTQPETGQLALSTIATLAETLSHLRQQGNRVILVSSGAVGVGCARLGLTERP 74

Query: 421 EPLR-KRALAAVGQVQLIKYYEDXLGAL 501
           + +  K+A+AAVGQ +L++ Y+D    L
Sbjct: 75  KAIALKQAVAAVGQGRLMRVYDDLFTTL 102

>ref|ZP_00074077.1| COG0263: Glutamate 5-kinase [Trichodesmium erythraeum IMS101]
          Length = 376

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +1

Query: 244 VVKVGTTSLMRPEHQTVNLSSLAKLCEAVRDLRSQGHHVIIVTSGAVGVGAQHLSL-PGP 420
           V+K+GT+SL   E   + LS+++ L E + +LR QG+ V++V+SGAVGVG   L L   P
Sbjct: 12  VIKIGTSSLTNSETGNLALSTISSLIETIINLRQQGYQVVLVSSGAVGVGCDILGLTKKP 71

Query: 421 EPL-RKRALAAVGQVQLIKYYEDXLGAL 501
             +  K+A+AAVGQ Q+++ Y D   +L
Sbjct: 72  RNISMKQAIAAVGQGQIMRVYNDLFSSL 99

>ref|NP_682908.1| glutamate 5-kinase [Thermosynechococcus elongatus BP-1]
           gi|29839522|sp|Q8DH42|PROB_SYNEL Glutamate 5-kinase
           (Gamma-glutamyl kinase) (GK) gi|22295845|dbj|BAC09670.1|
           glutamate 5-kinase [Thermosynechococcus elongatus BP-1]
          Length = 369

 Score = 64.7 bits (156), Expect = 6e-10
 Identities = 38/92 (41%), Positives = 59/92 (63%), Gaps = 2/92 (2%)
 Frame = +1

Query: 232 ASIFVVKVGTTSLMRPEHQTVNLSSLAKLCEAVRDLRSQGHHVIIVTSGAVGVGAQHLSL 411
           A   VVK+GT+SL   +   + L+++A+L E +   + +G  V++V+SGAVGVGA  L L
Sbjct: 2   AQTLVVKIGTSSLAGGKEGNLALATIAQLVEVLCHCQRRGDRVVLVSSGAVGVGAMRLGL 61

Query: 412 -PGPEPL-RKRALAAVGQVQLIKYYEDXLGAL 501
              P+ L +K+A+AAVGQ  L++ Y+D    L
Sbjct: 62  TERPQQLAQKQAVAAVGQGHLMRMYDDLFAVL 93



EST assemble image


clone accession position
1 LCL017e07_r AV626891 1 149
2 HCL031e05_r AV641316 5 501




Chlamydomonas reinhardtii
Kazusa DNA Research Institute